RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
RDH11-203ENST00000553384 ABCC10Q5T3U5 1492 aa12.28□□□□□ -0.44
RDH11-203ENST00000553384 FAM69CQ0P6D2 419 aa12.27□□□□□ -0.44
RDH11-203ENST00000553384 TOP2BQ02880 1626 aa12.27□□□□□ -0.45
RDH11-203ENST00000553384 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
RDH11-203ENST00000553384 MAPKBP1O60336 1514 aa12.25□□□□□ -0.45
RDH11-203ENST00000553384 KDM4FA0A1W2PPD8 638 aa12.2□□□□□ -0.46
RDH11-203ENST00000553384 DIP2BQ9P265 1576 aa12.19□□□□□ -0.46
RDH11-203ENST00000553384 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
RDH11-203ENST00000553384 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
RDH11-203ENST00000553384 KDM6BO15054 1643 aa12.16□□□□□ -0.46
RDH11-203ENST00000553384 ADCY10Q96PN6 1610 aa12.16□□□□□ -0.46
RDH11-203ENST00000553384 IGF1RP08069 1367 aa12.1□□□□□ -0.47
RDH11-203ENST00000553384 PTPRGP23470 1445 aa12.1□□□□□ -0.47
RDH11-203ENST00000553384 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
RDH11-203ENST00000553384 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
RDH11-203ENST00000553384 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
RDH11-203ENST00000553384 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
RDH11-203ENST00000553384 TNIKQ9UKE5 1360 aa12.06□□□□□ -0.48
RDH11-203ENST00000553384 ABCC2Q92887 1545 aa12.06□□□□□ -0.48
RDH11-203ENST00000553384 CARMIL2Q6F5E8 1435 aa12.05□□□□□ -0.48
RDH11-203ENST00000553384 GLI2P10070 1586 aa12.05□□□□□ -0.48
RDH11-203ENST00000553384 CUL7Q14999 1698 aa12.05□□□□□ -0.48
RDH11-203ENST00000553384 PHF23Q9BUL5 403 aaPredicted RBP12.04□□□□□ -0.48
RDH11-203ENST00000553384 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
RDH11-203ENST00000553384 UHRF1BP1LA0JNW5 1464 aa12.03□□□□□ -0.48
RDH11-203ENST00000553384 CARMIL1Q5VZK9 1371 aa12.01□□□□□ -0.49
RDH11-203ENST00000553384 ADGRL1O94910 1474 aa12□□□□□ -0.49
RDH11-203ENST00000553384 UACAQ9BZF9 1416 aa11.99□□□□□ -0.49
RDH11-203ENST00000553384 PPRC1Q5VV67 1664 aaKnown RBP11.98□□□□□ -0.49
RDH11-203ENST00000553384 TEX14Q8IWB6 1497 aa11.98□□□□□ -0.49
RDH11-203ENST00000553384 COL17A1Q9UMD9 1497 aaPredicted RBP11.97□□□□□ -0.49
RDH11-203ENST00000553384 TTBK1Q5TCY1 1321 aaPredicted RBP11.96□□□□□ -0.49
RDH11-203ENST00000553384 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.49
RDH11-203ENST00000553384 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.49
RDH11-203ENST00000553384 IQGAP2Q13576 1575 aa11.96□□□□□ -0.5
RDH11-203ENST00000553384 POTEDQ86YR6 584 aa11.96□□□□□ -0.5
RDH11-203ENST00000553384 MAP3K4Q9Y6R4 1608 aa11.93□□□□□ -0.5
RDH11-203ENST00000553384 DISP1Q96F81 1524 aa11.93□□□□□ -0.5
RDH11-203ENST00000553384 HECW2Q9P2P5 1572 aa11.91□□□□□ -0.5
RDH11-203ENST00000553384 UGGT2Q9NYU1 1516 aa11.89□□□□□ -0.51
RDH11-203ENST00000553384 WDR7Q9Y4E6 1490 aa11.87□□□□□ -0.51
RDH11-203ENST00000553384 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
RDH11-203ENST00000553384 RAPGEF2Q9Y4G8 1499 aa11.86□□□□□ -0.51
RDH11-203ENST00000553384 MAGI3Q5TCQ9 1506 aa11.86□□□□□ -0.51
RDH11-203ENST00000553384 CD109Q6YHK3 1445 aa11.85□□□□□ -0.51
RDH11-203ENST00000553384 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
RDH11-203ENST00000553384 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
RDH11-203ENST00000553384 CFAP43Q8NDM7 1665 aa11.8□□□□□ -0.52
RDH11-203ENST00000553384 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
RDH11-203ENST00000553384 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
RDH11-203ENST00000553384 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
RDH11-203ENST00000553384 ARAP3Q8WWN8 1544 aa11.78□□□□□ -0.52
RDH11-203ENST00000553384 ABCA8O94911 1581 aa11.76□□□□□ -0.53
RDH11-203ENST00000553384 FAM9AQ8IZU1 332 aaPredicted RBP11.76□□□□□ -0.53
RDH11-203ENST00000553384 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
RDH11-203ENST00000553384 EEA1Q15075 1411 aa11.72□□□□□ -0.53
RDH11-203ENST00000553384 PTPRMP28827 1452 aa11.72□□□□□ -0.53
RDH11-203ENST00000553384 KIF21BO75037 1637 aa11.71□□□□□ -0.53
RDH11-203ENST00000553384 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
RDH11-203ENST00000553384 ADAMTSL3P82987 1691 aa11.7□□□□□ -0.54
RDH11-203ENST00000553384 ATP10BO94823 1461 aa11.69□□□□□ -0.54
RDH11-203ENST00000553384 NEO1Q92859 1461 aa11.69□□□□□ -0.54
RDH11-203ENST00000553384 PRXQ9BXM0 1461 aa11.68□□□□□ -0.54
RDH11-203ENST00000553384 ABCA9Q8IUA7 1624 aa11.67□□□□□ -0.54
RDH11-203ENST00000553384 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
RDH11-203ENST00000553384 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.55
RDH11-203ENST00000553384 ARID4BQ4LE39 1312 aaPredicted RBP11.63□□□□□ -0.55
RDH11-203ENST00000553384 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
RDH11-203ENST00000553384 BCORL1Q5H9F3 1711 aa11.63□□□□□ -0.55
RDH11-203ENST00000553384 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
RDH11-203ENST00000553384 ARID3CA6NKF2 412 aa11.6□□□□□ -0.55
RDH11-203ENST00000553384 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
RDH11-203ENST00000553384 MADDQ8WXG6 1647 aa11.59□□□□□ -0.55
RDH11-203ENST00000553384 LOC105371045A0A1W2PR82 267 aa11.59□□□□□ -0.55
RDH11-203ENST00000553384 POGZQ7Z3K3 1410 aa11.59□□□□□ -0.55
RDH11-203ENST00000553384 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.55
RDH11-203ENST00000553384 DENND4BO75064 1496 aaPredicted RBP11.58□□□□□ -0.56
RDH11-203ENST00000553384 FRMPD1Q5SYB0 1578 aa11.58□□□□□ -0.56
RDH11-203ENST00000553384 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
RDH11-203ENST00000553384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.58□□□□□ -0.56
RDH11-203ENST00000553384 UBTFP17480 764 aaKnown RBP11.58□□□□□ -0.56
RDH11-203ENST00000553384 HNRNPUL2Q1KMD3 747 aaKnown RBP11.58□□□□□ -0.56
RDH11-203ENST00000553384 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
RDH11-203ENST00000553384 RAPGEF6Q8TEU7 1601 aa11.56□□□□□ -0.56
RDH11-203ENST00000553384 ARHGEF40Q8TER5 1519 aa11.56□□□□□ -0.56
RDH11-203ENST00000553384 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
RDH11-203ENST00000553384 SAMD9Q5K651 1589 aa11.55□□□□□ -0.56
RDH11-203ENST00000553384 AKNAQ7Z591 1439 aa11.55□□□□□ -0.56
RDH11-203ENST00000553384 FANCAO15360 1455 aa11.55□□□□□ -0.56
RDH11-203ENST00000553384 NUP153P49790 1475 aaKnown RBP11.54□□□□□ -0.56
RDH11-203ENST00000553384 MAGI2Q86UL8 1455 aa11.54□□□□□ -0.56
RDH11-203ENST00000553384 HSPA2P54652 639 aa11.54□□□□□ -0.56
RDH11-203ENST00000553384 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
RDH11-203ENST00000553384 RICTORQ6R327 1708 aa11.52□□□□□ -0.56
RDH11-203ENST00000553384 ZMYM4Q5VZL5 1548 aa11.52□□□□□ -0.56
RDH11-203ENST00000553384 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.56
RDH11-203ENST00000553384 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
RDH11-203ENST00000553384 ZFYVE16Q7Z3T8 1539 aa11.5□□□□□ -0.57
RDH11-203ENST00000553384 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms