RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-204	ENST00000553343	CTTNBP2	Q8WZ74	1663 aa		33.65	■■■□□ 2.98
SDR39U1-204	ENST00000553343	IQGAP2	Q13576	1575 aa		33.59	■■■□□ 2.97
SDR39U1-204	ENST00000553343	SHROOM2	Q13796	1616 aa		33.57	■■■□□ 2.97
SDR39U1-204	ENST00000553343	UGGT2	Q9NYU1	1516 aa		33.44	■■■□□ 2.94
SDR39U1-204	ENST00000553343	JPH4	Q96JJ6	628 aa		33.41	■■■□□ 2.94
SDR39U1-204	ENST00000553343	UBTF	P17480	764 aa	Known RBP	33.4	■■■□□ 2.94
SDR39U1-204	ENST00000553343	TNIK	Q9UKE5	1360 aa		33.37	■■■□□ 2.93
SDR39U1-204	ENST00000553343	DNAJC5	Q9H3Z4	198 aa		33.37	■■■□□ 2.93
SDR39U1-204	ENST00000553343	CARMIL2	Q6F5E8	1435 aa		33.32	■■■□□ 2.92
SDR39U1-204	ENST00000553343	ARHGEF11	O15085	1522 aa		33.32	■■■□□ 2.92
SDR39U1-204	ENST00000553343	PRG4	Q92954	1404 aa	Predicted RBP	33.31	■■■□□ 2.92
SDR39U1-204	ENST00000553343	EFCAB5	A4FU69	1503 aa		33.28	■■■□□ 2.92
SDR39U1-204	ENST00000553343	SAMD9	Q5K651	1589 aa		33.26	■■■□□ 2.91
SDR39U1-204	ENST00000553343	DISP1	Q96F81	1524 aa		33.25	■■■□□ 2.91
SDR39U1-204	ENST00000553343	RIMBP3C	A6NJZ7	1639 aa		33.24	■■■□□ 2.91
SDR39U1-204	ENST00000553343	RIMBP3B	A6NNM3	1639 aa		33.24	■■■□□ 2.91
SDR39U1-204	ENST00000553343	KIAA0556	O60303	1618 aa		33.24	■■■□□ 2.91
SDR39U1-204	ENST00000553343	RIMBP3	Q9UFD9	1639 aa		33.24	■■■□□ 2.91
SDR39U1-204	ENST00000553343	EHMT2	Q96KQ7	1210 aa		33.19	■■■□□ 2.9
SDR39U1-204	ENST00000553343	ERCC6L2	Q5T890	1561 aa		33.17	■■■□□ 2.9
SDR39U1-204	ENST00000553343	LOC105371045	A0A1W2PR82	267 aa		33.1	■■■□□ 2.89
SDR39U1-204	ENST00000553343	ARAP1	Q96P48	1450 aa		33.06	■■■□□ 2.88
SDR39U1-204	ENST00000553343	ARHGAP35	Q9NRY4	1499 aa		33.05	■■■□□ 2.88
SDR39U1-204	ENST00000553343	CLIP1	P30622	1438 aa		33.04	■■■□□ 2.88
SDR39U1-204	ENST00000553343	CEP162	Q5TB80	1403 aa		33.03	■■■□□ 2.88
SDR39U1-204	ENST00000553343	PTPRG	P23470	1445 aa		33.02	■■■□□ 2.88
SDR39U1-204	ENST00000553343	FHOD3	Q2V2M9	1422 aa		32.93	■■■□□ 2.86
SDR39U1-204	ENST00000553343	FMN1	Q68DA7	1419 aa		32.92	■■■□□ 2.86
SDR39U1-204	ENST00000553343	RANGAP1	P46060	587 aa	Predicted RBP	32.91	■■■□□ 2.86
SDR39U1-204	ENST00000553343	UHRF1BP1L	A0JNW5	1464 aa		32.87	■■■□□ 2.85
SDR39U1-204	ENST00000553343	UACA	Q9BZF9	1416 aa		32.85	■■■□□ 2.85
SDR39U1-204	ENST00000553343	ABCA8	O94911	1581 aa		32.84	■■■□□ 2.85
SDR39U1-204	ENST00000553343	P3H3	Q8IVL6	736 aa		32.84	■■■□□ 2.85
SDR39U1-204	ENST00000553343	ABCC2	Q92887	1545 aa		32.82	■■■□□ 2.85
SDR39U1-204	ENST00000553343	CYB5RL	Q6IPT4	315 aa		32.82	■■■□□ 2.84
SDR39U1-204	ENST00000553343	RAPGEF6	Q8TEU7	1601 aa		32.78	■■■□□ 2.84
SDR39U1-204	ENST00000553343	ADCY10	Q96PN6	1610 aa		32.76	■■■□□ 2.83
SDR39U1-204	ENST00000553343	PLB1	Q6P1J6	1458 aa		32.74	■■■□□ 2.83
SDR39U1-204	ENST00000553343	HECW1	Q76N89	1606 aa		32.69	■■■□□ 2.82
SDR39U1-204	ENST00000553343	CASKIN1	Q8WXD9	1431 aa		32.68	■■■□□ 2.82
SDR39U1-204	ENST00000553343	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.68	■■■□□ 2.82
SDR39U1-204	ENST00000553343	FYCO1	Q9BQS8	1478 aa		32.67	■■■□□ 2.82
SDR39U1-204	ENST00000553343	KDM5B	Q9UGL1	1544 aa		32.67	■■■□□ 2.82
SDR39U1-204	ENST00000553343	VPS8	Q8N3P4	1428 aa		32.66	■■■□□ 2.82
SDR39U1-204	ENST00000553343	PCF11	O94913	1555 aa	Known RBP	32.63	■■■□□ 2.81
SDR39U1-204	ENST00000553343	NUP153	P49790	1475 aa	Known RBP	32.62	■■■□□ 2.81
SDR39U1-204	ENST00000553343	NPM1	P06748	294 aa	Known RBP eCLIP	32.58	■■■□□ 2.81
SDR39U1-204	ENST00000553343	CCDC18	Q5T9S5	1454 aa		32.56	■■■□□ 2.8
SDR39U1-204	ENST00000553343	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.56	■■■□□ 2.8
SDR39U1-204	ENST00000553343	MAPKBP1	O60336	1514 aa		32.56	■■■□□ 2.8
SDR39U1-204	ENST00000553343	EPRS	P07814	1512 aa	Known RBP	32.51	■■■□□ 2.8
SDR39U1-204	ENST00000553343	ATP10B	O94823	1461 aa		32.51	■■■□□ 2.79
SDR39U1-204	ENST00000553343	LRRIQ1	Q96JM4	1722 aa		32.43	■■■□□ 2.78
SDR39U1-204	ENST00000553343	MAP3K1	Q13233	1512 aa		32.42	■■■□□ 2.78
SDR39U1-204	ENST00000553343	CDK13	Q14004	1512 aa	Known RBP	32.38	■■■□□ 2.77
SDR39U1-204	ENST00000553343	ASXL2	Q76L83	1435 aa		32.37	■■■□□ 2.77
SDR39U1-204	ENST00000553343	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.37	■■■□□ 2.77
SDR39U1-204	ENST00000553343	CFAP43	Q8NDM7	1665 aa		32.37	■■■□□ 2.77
SDR39U1-204	ENST00000553343	WDR7	Q9Y4E6	1490 aa		32.36	■■■□□ 2.77
SDR39U1-204	ENST00000553343	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.36	■■■□□ 2.77
SDR39U1-204	ENST00000553343	TIAM1	Q13009	1591 aa		32.32	■■■□□ 2.76
SDR39U1-204	ENST00000553343	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.3	■■■□□ 2.76
SDR39U1-204	ENST00000553343	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.3	■■■□□ 2.76
SDR39U1-204	ENST00000553343	PLEKHD1	A6NEE1	506 aa		32.29	■■■□□ 2.76
SDR39U1-204	ENST00000553343	ABCC10	Q5T3U5	1492 aa		32.26	■■■□□ 2.75
SDR39U1-204	ENST00000553343	ARID3C	A6NKF2	412 aa		32.25	■■■□□ 2.75
SDR39U1-204	ENST00000553343	TRO	Q12816	1431 aa	Predicted RBP	32.25	■■■□□ 2.75
SDR39U1-204	ENST00000553343	GLI2	P10070	1586 aa		32.24	■■■□□ 2.75
SDR39U1-204	ENST00000553343	APLP2	Q06481	763 aa		32.23	■■■□□ 2.75
SDR39U1-204	ENST00000553343	DIP2B	Q9P265	1576 aa		32.23	■■■□□ 2.75
SDR39U1-204	ENST00000553343	EHBP1L1	Q8N3D4	1523 aa		32.22	■■■□□ 2.75
SDR39U1-204	ENST00000553343	KIF14	Q15058	1648 aa		32.17	■■■□□ 2.74
SDR39U1-204	ENST00000553343	MTUS2	Q5JR59	1369 aa		32.16	■■■□□ 2.74
SDR39U1-204	ENST00000553343	MAGI3	Q5TCQ9	1506 aa		32.16	■■■□□ 2.74
SDR39U1-204	ENST00000553343	LRRC9	Q6ZRR7	1453 aa		32.15	■■■□□ 2.74
SDR39U1-204	ENST00000553343	ABCA9	Q8IUA7	1624 aa		32.13	■■■□□ 2.73
SDR39U1-204	ENST00000553343	KIF13A	Q9H1H9	1805 aa		32.13	■■■□□ 2.73
SDR39U1-204	ENST00000553343	MAP3K4	Q9Y6R4	1608 aa		32.07	■■■□□ 2.72
SDR39U1-204	ENST00000553343	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.06	■■■□□ 2.72
SDR39U1-204	ENST00000553343	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.05	■■■□□ 2.72
SDR39U1-204	ENST00000553343	FAM69C	Q0P6D2	419 aa		32.03	■■■□□ 2.72
SDR39U1-204	ENST00000553343	KCNH8	Q96L42	1107 aa		32.02	■■■□□ 2.72
SDR39U1-204	ENST00000553343	ARAP3	Q8WWN8	1544 aa		32	■■■□□ 2.71
SDR39U1-204	ENST00000553343	TTC37	Q6PGP7	1564 aa		31.98	■■■□□ 2.71
SDR39U1-204	ENST00000553343	MYO5C	Q9NQX4	1742 aa		31.95	■■■□□ 2.71
SDR39U1-204	ENST00000553343	CD109	Q6YHK3	1445 aa		31.95	■■■□□ 2.71
SDR39U1-204	ENST00000553343	TRH	P20396	242 aa	Predicted RBP	31.95	■■■□□ 2.71
SDR39U1-204	ENST00000553343	KANK4	Q5T7N3	995 aa	Predicted RBP	31.94	■■■□□ 2.7
SDR39U1-204	ENST00000553343	NCOA2	Q15596	1464 aa		31.93	■■■□□ 2.7
SDR39U1-204	ENST00000553343	TEX14	Q8IWB6	1497 aa		31.92	■■■□□ 2.7
SDR39U1-204	ENST00000553343	ITSN2	Q9NZM3	1697 aa		31.91	■■■□□ 2.7
SDR39U1-204	ENST00000553343	PLCH2	O75038	1416 aa		31.9	■■■□□ 2.7
SDR39U1-204	ENST00000553343	CFAP74	Q9C0B2	1584 aa		31.9	■■■□□ 2.7
SDR39U1-204	ENST00000553343	PREX2	Q70Z35	1606 aa		31.89	■■■□□ 2.7
SDR39U1-204	ENST00000553343	CDC42BPA	Q5VT25	1732 aa		31.86	■■■□□ 2.69
SDR39U1-204	ENST00000553343	PPRC1	Q5VV67	1664 aa	Known RBP	31.86	■■■□□ 2.69
SDR39U1-204	ENST00000553343	CCNB3	Q8WWL7	1395 aa		31.86	■■■□□ 2.69
SDR39U1-204	ENST00000553343	PHLDB1	Q86UU1	1377 aa		31.84	■■■□□ 2.69
SDR39U1-204	ENST00000553343	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.84	■■■□□ 2.69
SDR39U1-204	ENST00000553343	NEO1	Q92859	1461 aa		31.83	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms