RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
TMEM116-218ENST00000552839 FAM69CQ0P6D2 419 aa19.85■□□□□ 0.77
TMEM116-218ENST00000552839 ABCC10Q5T3U5 1492 aa19.85■□□□□ 0.77
TMEM116-218ENST00000552839 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
TMEM116-218ENST00000552839 NPM1P06748 294 aaKnown RBP eCLIP19.81■□□□□ 0.76
TMEM116-218ENST00000552839 ADCY10Q96PN6 1610 aa19.8■□□□□ 0.76
TMEM116-218ENST00000552839 DIP2BQ9P265 1576 aa19.8■□□□□ 0.76
TMEM116-218ENST00000552839 TSPOAP1O95153 1857 aa19.73■□□□□ 0.75
TMEM116-218ENST00000552839 KDM6BO15054 1643 aa19.72■□□□□ 0.75
TMEM116-218ENST00000552839 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
TMEM116-218ENST00000552839 KDM4FA0A1W2PPD8 638 aa19.69■□□□□ 0.74
TMEM116-218ENST00000552839 IGF1RP08069 1367 aa19.67■□□□□ 0.74
TMEM116-218ENST00000552839 CUL7Q14999 1698 aa19.65■□□□□ 0.74
TMEM116-218ENST00000552839 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
TMEM116-218ENST00000552839 PTPRGP23470 1445 aa19.59■□□□□ 0.73
TMEM116-218ENST00000552839 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
TMEM116-218ENST00000552839 PPRC1Q5VV67 1664 aaKnown RBP19.54■□□□□ 0.72
TMEM116-218ENST00000552839 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
TMEM116-218ENST00000552839 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
TMEM116-218ENST00000552839 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
TMEM116-218ENST00000552839 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
TMEM116-218ENST00000552839 ASXL2Q76L83 1435 aa19.51■□□□□ 0.71
TMEM116-218ENST00000552839 GLI2P10070 1586 aa19.5■□□□□ 0.71
TMEM116-218ENST00000552839 PLB1Q6P1J6 1458 aa19.49■□□□□ 0.71
TMEM116-218ENST00000552839 IQGAP2Q13576 1575 aa19.48■□□□□ 0.71
TMEM116-218ENST00000552839 UHRF1BP1LA0JNW5 1464 aa19.47■□□□□ 0.71
TMEM116-218ENST00000552839 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
TMEM116-218ENST00000552839 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
TMEM116-218ENST00000552839 ADGRL1O94910 1474 aa19.43■□□□□ 0.7
TMEM116-218ENST00000552839 COL17A1Q9UMD9 1497 aaPredicted RBP19.42■□□□□ 0.7
TMEM116-218ENST00000552839 DISP1Q96F81 1524 aa19.42■□□□□ 0.7
TMEM116-218ENST00000552839 MAP3K4Q9Y6R4 1608 aa19.4■□□□□ 0.7
TMEM116-218ENST00000552839 EPRSP07814 1512 aaKnown RBP19.4■□□□□ 0.7
TMEM116-218ENST00000552839 KDM5BQ9UGL1 1544 aa19.39■□□□□ 0.69
TMEM116-218ENST00000552839 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
TMEM116-218ENST00000552839 UGGT2Q9NYU1 1516 aa19.35■□□□□ 0.69
TMEM116-218ENST00000552839 TEX14Q8IWB6 1497 aa19.33■□□□□ 0.68
TMEM116-218ENST00000552839 KIAA0556O60303 1618 aa19.32■□□□□ 0.68
TMEM116-218ENST00000552839 RAPGEF2Q9Y4G8 1499 aa19.3■□□□□ 0.68
TMEM116-218ENST00000552839 HECW2Q9P2P5 1572 aa19.28■□□□□ 0.68
TMEM116-218ENST00000552839 WDR7Q9Y4E6 1490 aa19.26■□□□□ 0.67
TMEM116-218ENST00000552839 CTTNBP2Q8WZ74 1663 aa19.21■□□□□ 0.67
TMEM116-218ENST00000552839 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
TMEM116-218ENST00000552839 MAGI3Q5TCQ9 1506 aa19.19■□□□□ 0.66
TMEM116-218ENST00000552839 CD109Q6YHK3 1445 aa19.18■□□□□ 0.66
TMEM116-218ENST00000552839 ABCA8O94911 1581 aa19.17■□□□□ 0.66
TMEM116-218ENST00000552839 KCNH8Q96L42 1107 aa19.16■□□□□ 0.66
TMEM116-218ENST00000552839 GOLGA3Q08378 1498 aa19.13■□□□□ 0.65
TMEM116-218ENST00000552839 KIF21BO75037 1637 aa19.12■□□□□ 0.65
TMEM116-218ENST00000552839 ARAP3Q8WWN8 1544 aa19.05■□□□□ 0.64
TMEM116-218ENST00000552839 PRXQ9BXM0 1461 aa19.02■□□□□ 0.63
TMEM116-218ENST00000552839 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
TMEM116-218ENST00000552839 ATP10BO94823 1461 aa19.01■□□□□ 0.63
TMEM116-218ENST00000552839 ADAMTSL3P82987 1691 aa18.98■□□□□ 0.63
TMEM116-218ENST00000552839 P3H3Q8IVL6 736 aa18.98■□□□□ 0.63
TMEM116-218ENST00000552839 ABCA9Q8IUA7 1624 aa18.98■□□□□ 0.63
TMEM116-218ENST00000552839 PTPRMP28827 1452 aa18.96■□□□□ 0.63
TMEM116-218ENST00000552839 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
TMEM116-218ENST00000552839 RAPGEF3O95398 923 aa18.94■□□□□ 0.62
TMEM116-218ENST00000552839 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
TMEM116-218ENST00000552839 PHLDB1Q86UU1 1377 aa18.93■□□□□ 0.62
TMEM116-218ENST00000552839 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
TMEM116-218ENST00000552839 BCORL1Q5H9F3 1711 aa18.91■□□□□ 0.62
TMEM116-218ENST00000552839 NEO1Q92859 1461 aa18.9■□□□□ 0.62
TMEM116-218ENST00000552839 FRMPD1Q5SYB0 1578 aa18.89■□□□□ 0.62
TMEM116-218ENST00000552839 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.62
TMEM116-218ENST00000552839 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
TMEM116-218ENST00000552839 MADDQ8WXG6 1647 aa18.87■□□□□ 0.61
TMEM116-218ENST00000552839 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
TMEM116-218ENST00000552839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
TMEM116-218ENST00000552839 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
TMEM116-218ENST00000552839 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
TMEM116-218ENST00000552839 LMTK3Q96Q04 1460 aa18.82■□□□□ 0.6
TMEM116-218ENST00000552839 NUP153P49790 1475 aaKnown RBP18.81■□□□□ 0.6
TMEM116-218ENST00000552839 RIMS1Q86UR5 1692 aaKnown RBP18.81■□□□□ 0.6
TMEM116-218ENST00000552839 RICTORQ6R327 1708 aa18.8■□□□□ 0.6
TMEM116-218ENST00000552839 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
TMEM116-218ENST00000552839 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
TMEM116-218ENST00000552839 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
TMEM116-218ENST00000552839 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
TMEM116-218ENST00000552839 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
TMEM116-218ENST00000552839 PLEKHD1A6NEE1 506 aa18.74■□□□□ 0.59
TMEM116-218ENST00000552839 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
TMEM116-218ENST00000552839 SIGLEC1Q9BZZ2 1709 aa18.73■□□□□ 0.59
TMEM116-218ENST00000552839 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
TMEM116-218ENST00000552839 FANCAO15360 1455 aa18.72■□□□□ 0.59
TMEM116-218ENST00000552839 HSPA2P54652 639 aa18.72■□□□□ 0.59
TMEM116-218ENST00000552839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.72■□□□□ 0.59
TMEM116-218ENST00000552839 EEA1Q15075 1411 aa18.7■□□□□ 0.58
TMEM116-218ENST00000552839 ZMYM4Q5VZL5 1548 aa18.69■□□□□ 0.58
TMEM116-218ENST00000552839 TTC37Q6PGP7 1564 aa18.69■□□□□ 0.58
TMEM116-218ENST00000552839 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
TMEM116-218ENST00000552839 YEATS2Q9ULM3 1422 aa18.68■□□□□ 0.58
TMEM116-218ENST00000552839 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
TMEM116-218ENST00000552839 EFCAB5A4FU69 1503 aa18.67■□□□□ 0.58
TMEM116-218ENST00000552839 ZFYVE16Q7Z3T8 1539 aa18.67■□□□□ 0.58
TMEM116-218ENST00000552839 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
TMEM116-218ENST00000552839 HECW1Q76N89 1606 aa18.64■□□□□ 0.57
TMEM116-218ENST00000552839 MAGI2Q86UL8 1455 aa18.64■□□□□ 0.57
TMEM116-218ENST00000552839 MLECQ14165 292 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms