RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.74
CEP290-207ENST00000552810 PTMAP06454 111 aaKnown RBP10.42□□□□□ -0.74
CEP290-207ENST00000552810 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
CEP290-207ENST00000552810 DDX10Q13206 875 aaKnown RBP10.4□□□□□ -0.74
CEP290-207ENST00000552810 P3H3Q8IVL6 736 aa10.4□□□□□ -0.75
CEP290-207ENST00000552810 ZRSR1Q15695 479 aaKnown RBP10.38□□□□□ -0.75
CEP290-207ENST00000552810 NOC3LQ8WTT2 800 aaKnown RBP10.38□□□□□ -0.75
CEP290-207ENST00000552810 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
CEP290-207ENST00000552810 RRP12Q5JTH9 1297 aaKnown RBP10.36□□□□□ -0.75
CEP290-207ENST00000552810 AK7Q96M32 723 aa10.35□□□□□ -0.75
CEP290-207ENST00000552810 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
CEP290-207ENST00000552810 A0A0U1RQG5 324 aaPredicted RBP10.34□□□□□ -0.75
CEP290-207ENST00000552810 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
CEP290-207ENST00000552810 ZNF777Q9ULD5 760 aaPredicted RBP10.31□□□□□ -0.76
CEP290-207ENST00000552810 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
CEP290-207ENST00000552810 TAF7LQ5H9L4 462 aa10.3□□□□□ -0.76
CEP290-207ENST00000552810 UPF2Q9HAU5 1272 aaKnown RBP10.3□□□□□ -0.76
CEP290-207ENST00000552810 TNNT3P45378 269 aaPredicted RBP10.29□□□□□ -0.76
CEP290-207ENST00000552810 DEKP35659 375 aaKnown RBP10.27□□□□□ -0.76
CEP290-207ENST00000552810 NPHP1O15259 732 aa10.27□□□□□ -0.77
CEP290-207ENST00000552810 TIMELESSQ9UNS1 1208 aa10.26□□□□□ -0.77
CEP290-207ENST00000552810 MIER1Q8N108 512 aa10.26□□□□□ -0.77
CEP290-207ENST00000552810 GZF1Q9H116 711 aaPredicted RBP10.26□□□□□ -0.77
CEP290-207ENST00000552810 CNKSR2Q8WXI2 1034 aa10.25□□□□□ -0.77
CEP290-207ENST00000552810 NAP1L2Q9ULW6 460 aaPredicted RBP10.25□□□□□ -0.77
CEP290-207ENST00000552810 WWC1Q8IX03 1113 aa10.25□□□□□ -0.77
CEP290-207ENST00000552810 FBLN2P98095 1184 aa10.25□□□□□ -0.77
CEP290-207ENST00000552810 RGS3P49796 1198 aa10.24□□□□□ -0.77
CEP290-207ENST00000552810 DHX37Q8IY37 1157 aaKnown RBP10.23□□□□□ -0.77
CEP290-207ENST00000552810 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
CEP290-207ENST00000552810 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
CEP290-207ENST00000552810 ISY1Q9ULR0 285 aaKnown RBP10.23□□□□□ -0.77
CEP290-207ENST00000552810 GOLGA6L22H0YM25 854 aa10.22□□□□□ -0.77
CEP290-207ENST00000552810 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
CEP290-207ENST00000552810 MAPK8IP2Q13387 824 aaPredicted RBP10.21□□□□□ -0.78
CEP290-207ENST00000552810 NEUROD2Q15784 382 aa10.2□□□□□ -0.78
CEP290-207ENST00000552810 CSRNP3Q8WYN3 585 aa10.19□□□□□ -0.78
CEP290-207ENST00000552810 BCCIPQ9P287 314 aaKnown RBP eCLIP10.19□□□□□ -0.78
CEP290-207ENST00000552810 C14orf37Q86TY3 774 aa10.19□□□□□ -0.78
CEP290-207ENST00000552810 STK11IPQ8N1F8 1099 aa10.19□□□□□ -0.78
CEP290-207ENST00000552810 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
CEP290-207ENST00000552810 KIAA2012Q0VF49 1180 aa10.17□□□□□ -0.78
CEP290-207ENST00000552810 PTMSP20962 102 aa10.16□□□□□ -0.78
CEP290-207ENST00000552810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.16□□□□□ -0.78
CEP290-207ENST00000552810 SUPT16HQ9Y5B9 1047 aaKnown RBP10.16□□□□□ -0.78
CEP290-207ENST00000552810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.78
CEP290-207ENST00000552810 CHIC2Q9UKJ5 165 aa10.14□□□□□ -0.79
CEP290-207ENST00000552810 B4GALNT3Q6L9W6 998 aa10.13□□□□□ -0.79
CEP290-207ENST00000552810 DRC7Q8IY82 874 aa10.13□□□□□ -0.79
CEP290-207ENST00000552810 MRS2Q9HD23 443 aa10.13□□□□□ -0.79
CEP290-207ENST00000552810 APBB1O00213 710 aa10.12□□□□□ -0.79
CEP290-207ENST00000552810 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
CEP290-207ENST00000552810 FOXD4L4Q8WXT5 416 aaPredicted RBP10.12□□□□□ -0.79
CEP290-207ENST00000552810 PPM1GO15355 546 aaPredicted RBP10.11□□□□□ -0.79
CEP290-207ENST00000552810 L1TD1Q5T7N2 865 aaKnown RBP10.11□□□□□ -0.79
CEP290-207ENST00000552810 SEPT11Q9NVA2 429 aaKnown RBP10.11□□□□□ -0.79
CEP290-207ENST00000552810 GOLGA2Q08379 1002 aa10.1□□□□□ -0.79
CEP290-207ENST00000552810 GOLGA6L6A8MZA4 724 aa10.1□□□□□ -0.79
CEP290-207ENST00000552810 TMC1Q8TDI8 760 aa10.1□□□□□ -0.79
CEP290-207ENST00000552810 WDR70Q9NW82 654 aa10.1□□□□□ -0.79
CEP290-207ENST00000552810 WDR43Q15061 677 aaKnown RBP eCLIP10.1□□□□□ -0.79
CEP290-207ENST00000552810 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
CEP290-207ENST00000552810 GOLGA6L4A6NEF3 574 aa10.08□□□□□ -0.8
CEP290-207ENST00000552810 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
CEP290-207ENST00000552810 CREBRFQ8IUR6 639 aa10.08□□□□□ -0.8
CEP290-207ENST00000552810 NOP58Q9Y2X3 529 aaKnown RBP10.08□□□□□ -0.8
CEP290-207ENST00000552810 STAG3Q9UJ98 1225 aa10.08□□□□□ -0.8
CEP290-207ENST00000552810 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.07□□□□□ -0.8
CEP290-207ENST00000552810 FRAT1Q92837 279 aaPredicted RBP10.07□□□□□ -0.8
CEP290-207ENST00000552810 CHAF1AQ13111 956 aaPredicted RBP10.06□□□□□ -0.8
CEP290-207ENST00000552810 BBXQ8WY36 941 aaPredicted RBP10.06□□□□□ -0.8
CEP290-207ENST00000552810 HSP90AB1P08238 724 aaKnown RBP10.05□□□□□ -0.8
CEP290-207ENST00000552810 PPP4R2Q9NY27 417 aa10.05□□□□□ -0.8
CEP290-207ENST00000552810 SETQ01105 290 aaPredicted RBP10.05□□□□□ -0.8
CEP290-207ENST00000552810 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
CEP290-207ENST00000552810 GOLGA6L1Q8N7Z2 621 aa10.04□□□□□ -0.8
CEP290-207ENST00000552810 NRDCO43847 1150 aa10.04□□□□□ -0.8
CEP290-207ENST00000552810 SLC4A3P48751 1232 aa10.03□□□□□ -0.8
CEP290-207ENST00000552810 FOXD4L6Q3SYB3 417 aaPredicted RBP10.03□□□□□ -0.8
CEP290-207ENST00000552810 FOXD4L3Q6VB84 417 aaPredicted RBP10.03□□□□□ -0.8
CEP290-207ENST00000552810 SOX12O15370 315 aa10.03□□□□□ -0.8
CEP290-207ENST00000552810 MSNP26038 577 aaKnown RBP10.02□□□□□ -0.8
CEP290-207ENST00000552810 CEP89Q96ST8 783 aa10.02□□□□□ -0.81
CEP290-207ENST00000552810 ZNF526Q8TF50 670 aaPredicted RBP10.02□□□□□ -0.81
CEP290-207ENST00000552810 MYH16Q9H6N6 1097 aa10.01□□□□□ -0.81
CEP290-207ENST00000552810 BECN1Q14457 450 aa10.01□□□□□ -0.81
CEP290-207ENST00000552810 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
CEP290-207ENST00000552810 GSE1Q14687 1217 aa10.01□□□□□ -0.81
CEP290-207ENST00000552810 ESF1Q9H501 851 aaKnown RBP10□□□□□ -0.81
CEP290-207ENST00000552810 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
CEP290-207ENST00000552810 DDRGK1Q96HY6 314 aa9.98□□□□□ -0.81
CEP290-207ENST00000552810 PPM1FP49593 454 aaPredicted RBP9.97□□□□□ -0.81
CEP290-207ENST00000552810 FGD1P98174 961 aa9.97□□□□□ -0.81
CEP290-207ENST00000552810 RBM19Q9Y4C8 960 aaKnown RBP9.97□□□□□ -0.81
CEP290-207ENST00000552810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.97□□□□□ -0.816e-9■■■■■ 134.6
CEP290-207ENST00000552810 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.97□□□□□ -0.81
CEP290-207ENST00000552810 HSP90B1P14625 803 aaKnown RBP9.95□□□□□ -0.82
CEP290-207ENST00000552810 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
CEP290-207ENST00000552810 SKIDA1Q1XH10 827 aa9.94□□□□□ -0.82
CEP290-207ENST00000552810 CCDC9Q9Y3X0 531 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms