RNA–Protein interactions for RNA: ENST00000550683.5

ACVRL1-206, Transcript of activin A receptor like type 1, humanhuman

TSL 1 (best) BASIC

Gene ACVRL1, Length 4,121 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVRL1-206ENST00000550683 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
ACVRL1-206ENST00000550683 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
ACVRL1-206ENST00000550683 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
ACVRL1-206ENST00000550683 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
ACVRL1-206ENST00000550683 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
ACVRL1-206ENST00000550683 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
ACVRL1-206ENST00000550683 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
ACVRL1-206ENST00000550683 IGF1RP08069 1367 aa17.09■□□□□ 0.33
ACVRL1-206ENST00000550683 PLEKHG5O94827 1062 aa17.08■□□□□ 0.32
ACVRL1-206ENST00000550683 POLR3GLQ9BT43 218 aa17.08■□□□□ 0.32
ACVRL1-206ENST00000550683 NESP48681 1621 aa17.07■□□□□ 0.32
ACVRL1-206ENST00000550683 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
ACVRL1-206ENST00000550683 CUX1P39880 1505 aa17.05■□□□□ 0.32
ACVRL1-206ENST00000550683 TOP2BQ02880 1626 aa17.05■□□□□ 0.32
ACVRL1-206ENST00000550683 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
ACVRL1-206ENST00000550683 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
ACVRL1-206ENST00000550683 FHOD3Q2V2M9 1422 aa16.99■□□□□ 0.31
ACVRL1-206ENST00000550683 CNGB1Q14028 1251 aaPredicted RBP16.98■□□□□ 0.31
ACVRL1-206ENST00000550683 KIF21BO75037 1637 aa16.98■□□□□ 0.31
ACVRL1-206ENST00000550683 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
ACVRL1-206ENST00000550683 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
ACVRL1-206ENST00000550683 TONSLQ96HA7 1378 aa16.93■□□□□ 0.3
ACVRL1-206ENST00000550683 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
ACVRL1-206ENST00000550683 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
ACVRL1-206ENST00000550683 FMN1Q68DA7 1419 aa16.91■□□□□ 0.3
ACVRL1-206ENST00000550683 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
ACVRL1-206ENST00000550683 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
ACVRL1-206ENST00000550683 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
ACVRL1-206ENST00000550683 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.29
ACVRL1-206ENST00000550683 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
ACVRL1-206ENST00000550683 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
ACVRL1-206ENST00000550683 NEFLP07196 543 aa16.85■□□□□ 0.29
ACVRL1-206ENST00000550683 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
ACVRL1-206ENST00000550683 ARHGAP35Q9NRY4 1499 aa16.84■□□□□ 0.29
ACVRL1-206ENST00000550683 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
ACVRL1-206ENST00000550683 TSPY4P0CV99 314 aa16.83■□□□□ 0.29
ACVRL1-206ENST00000550683 TSPY10P0CW01 314 aa16.83■□□□□ 0.29
ACVRL1-206ENST00000550683 AQRO60306 1485 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACVRL1-206ENST00000550683 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
ACVRL1-206ENST00000550683 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
ACVRL1-206ENST00000550683 ANP32CO43423 234 aa16.8■□□□□ 0.28
ACVRL1-206ENST00000550683 CLSPNQ9HAW4 1339 aa16.8■□□□□ 0.28
ACVRL1-206ENST00000550683 GLIPR1L2Q4G1C9 344 aa16.79■□□□□ 0.28
ACVRL1-206ENST00000550683 UBE2Q2Q8WVN8 375 aa16.79■□□□□ 0.28
ACVRL1-206ENST00000550683 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
ACVRL1-206ENST00000550683 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
ACVRL1-206ENST00000550683 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
ACVRL1-206ENST00000550683 MIER1Q8N108 512 aa16.77■□□□□ 0.27
ACVRL1-206ENST00000550683 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
ACVRL1-206ENST00000550683 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
ACVRL1-206ENST00000550683 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
ACVRL1-206ENST00000550683 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
ACVRL1-206ENST00000550683 SALL2Q9Y467 1007 aaPredicted RBP16.76■□□□□ 0.27
ACVRL1-206ENST00000550683 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
ACVRL1-206ENST00000550683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
ACVRL1-206ENST00000550683 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
ACVRL1-206ENST00000550683 CARMIL2Q6F5E8 1435 aa16.73■□□□□ 0.27
ACVRL1-206ENST00000550683 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
ACVRL1-206ENST00000550683 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
ACVRL1-206ENST00000550683 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
ACVRL1-206ENST00000550683 MRC2Q9UBG0 1479 aa16.69■□□□□ 0.26
ACVRL1-206ENST00000550683 BCANQ96GW7 911 aa16.66■□□□□ 0.26
ACVRL1-206ENST00000550683 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
ACVRL1-206ENST00000550683 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
ACVRL1-206ENST00000550683 PHLDB1Q86UU1 1377 aa16.64■□□□□ 0.25
ACVRL1-206ENST00000550683 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
ACVRL1-206ENST00000550683 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
ACVRL1-206ENST00000550683 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
ACVRL1-206ENST00000550683 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
ACVRL1-206ENST00000550683 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
ACVRL1-206ENST00000550683 CASKIN1Q8WXD9 1431 aa16.6■□□□□ 0.25
ACVRL1-206ENST00000550683 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
ACVRL1-206ENST00000550683 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
ACVRL1-206ENST00000550683 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
ACVRL1-206ENST00000550683 EIF4G2P78344 907 aaKnown RBP eCLIP16.56■□□□□ 0.24
ACVRL1-206ENST00000550683 FOXD1Q16676 465 aa16.56■□□□□ 0.24
ACVRL1-206ENST00000550683 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
ACVRL1-206ENST00000550683 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
ACVRL1-206ENST00000550683 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
ACVRL1-206ENST00000550683 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
ACVRL1-206ENST00000550683 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
ACVRL1-206ENST00000550683 FGD6Q6ZV73 1430 aa16.53■□□□□ 0.24
ACVRL1-206ENST00000550683 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
ACVRL1-206ENST00000550683 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
ACVRL1-206ENST00000550683 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
ACVRL1-206ENST00000550683 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
ACVRL1-206ENST00000550683 MPHOSPH9Q99550 1183 aa16.49■□□□□ 0.23
ACVRL1-206ENST00000550683 PTPRGP23470 1445 aa16.49■□□□□ 0.23
ACVRL1-206ENST00000550683 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
ACVRL1-206ENST00000550683 CUL7Q14999 1698 aa16.47■□□□□ 0.23
ACVRL1-206ENST00000550683 NCOA2Q15596 1464 aa16.47■□□□□ 0.23
ACVRL1-206ENST00000550683 NBR1Q14596 966 aa16.47■□□□□ 0.23
ACVRL1-206ENST00000550683 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
ACVRL1-206ENST00000550683 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
ACVRL1-206ENST00000550683 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
ACVRL1-206ENST00000550683 PPP1R15AO75807 674 aaPredicted RBP16.44■□□□□ 0.22
ACVRL1-206ENST00000550683 PKD2Q13563 968 aa16.44■□□□□ 0.22
ACVRL1-206ENST00000550683 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
ACVRL1-206ENST00000550683 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
ACVRL1-206ENST00000550683 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms