RNA–Protein interactions for RNA: ENST00000550548.1

AC007424.1-202, humanhuman

TSL 1 (best)

Gene AC007424.1, Length 2,945 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007424.1-202ENST00000550548 EEA1Q15075 1411 aa16.89■□□□□ 0.29
AC007424.1-202ENST00000550548 BRPF3Q9ULD4 1205 aa16.89■□□□□ 0.29
AC007424.1-202ENST00000550548 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
AC007424.1-202ENST00000550548 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
AC007424.1-202ENST00000550548 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
AC007424.1-202ENST00000550548 GSE1Q14687 1217 aa16.83■□□□□ 0.29
AC007424.1-202ENST00000550548 DHX57Q6P158 1386 aaKnown RBP16.83■□□□□ 0.28
AC007424.1-202ENST00000550548 ABCC9O60706 1549 aa16.82■□□□□ 0.28
AC007424.1-202ENST00000550548 HOMEZQ8IX15 550 aa16.82■□□□□ 0.28
AC007424.1-202ENST00000550548 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
AC007424.1-202ENST00000550548 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
AC007424.1-202ENST00000550548 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
AC007424.1-202ENST00000550548 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
AC007424.1-202ENST00000550548 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
AC007424.1-202ENST00000550548 TULP1O00294 542 aaPredicted RBP16.77■□□□□ 0.28
AC007424.1-202ENST00000550548 NACADO15069 1562 aa16.75■□□□□ 0.27
AC007424.1-202ENST00000550548 CHMP4AQ9BY43 222 aa16.73■□□□□ 0.27
AC007424.1-202ENST00000550548 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
AC007424.1-202ENST00000550548 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
AC007424.1-202ENST00000550548 ANP32CO43423 234 aa16.71■□□□□ 0.27
AC007424.1-202ENST00000550548 PAXIP1Q6ZW49 1069 aaPredicted RBP16.71■□□□□ 0.27
AC007424.1-202ENST00000550548 PPP1R15AO75807 674 aaPredicted RBP16.7■□□□□ 0.26
AC007424.1-202ENST00000550548 BRD2P25440 801 aaKnown RBP16.69■□□□□ 0.26
AC007424.1-202ENST00000550548 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
AC007424.1-202ENST00000550548 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
AC007424.1-202ENST00000550548 CENPJQ9HC77 1338 aaPredicted RBP16.67■□□□□ 0.26
AC007424.1-202ENST00000550548 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
AC007424.1-202ENST00000550548 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
AC007424.1-202ENST00000550548 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
AC007424.1-202ENST00000550548 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
AC007424.1-202ENST00000550548 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
AC007424.1-202ENST00000550548 FRAT1Q92837 279 aaPredicted RBP16.6■□□□□ 0.25
AC007424.1-202ENST00000550548 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
AC007424.1-202ENST00000550548 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
AC007424.1-202ENST00000550548 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
AC007424.1-202ENST00000550548 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
AC007424.1-202ENST00000550548 HNRNPUQ00839 825 aaKnown RBP eCLIP16.56■□□□□ 0.24
AC007424.1-202ENST00000550548 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
AC007424.1-202ENST00000550548 PRDM4Q9UKN5 801 aa16.55■□□□□ 0.24
AC007424.1-202ENST00000550548 CUX2O14529 1486 aa16.55■□□□□ 0.24
AC007424.1-202ENST00000550548 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
AC007424.1-202ENST00000550548 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
AC007424.1-202ENST00000550548 NFKBIBQ15653 356 aa16.51■□□□□ 0.23
AC007424.1-202ENST00000550548 PDCL3Q9H2J4 239 aa16.5■□□□□ 0.23
AC007424.1-202ENST00000550548 PNNQ9H307 717 aaKnown RBP16.5■□□□□ 0.23
AC007424.1-202ENST00000550548 RRAGDQ9NQL2 400 aaPredicted RBP16.49■□□□□ 0.23
AC007424.1-202ENST00000550548 CLCN1P35523 988 aa16.48■□□□□ 0.23
AC007424.1-202ENST00000550548 HAP1P54257 671 aaPredicted RBP16.47■□□□□ 0.23
AC007424.1-202ENST00000550548 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
AC007424.1-202ENST00000550548 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
AC007424.1-202ENST00000550548 L1TD1Q5T7N2 865 aaKnown RBP16.43■□□□□ 0.22
AC007424.1-202ENST00000550548 MS4A1P11836 297 aa16.42■□□□□ 0.22
AC007424.1-202ENST00000550548 CHMP4BQ9H444 224 aaKnown RBP16.42■□□□□ 0.22
AC007424.1-202ENST00000550548 VPS8Q8N3P4 1428 aa16.42■□□□□ 0.22
AC007424.1-202ENST00000550548 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
AC007424.1-202ENST00000550548 TPM2P07951 284 aa16.4■□□□□ 0.22
AC007424.1-202ENST00000550548 BBXQ8WY36 941 aaPredicted RBP16.4■□□□□ 0.22
AC007424.1-202ENST00000550548 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
AC007424.1-202ENST00000550548 SMARCA2P51531 1590 aa16.39■□□□□ 0.22
AC007424.1-202ENST00000550548 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.22
AC007424.1-202ENST00000550548 ZBED9Q6R2W3 1325 aa16.39■□□□□ 0.21
AC007424.1-202ENST00000550548 NCLP19338 710 aaKnown RBP16.39■□□□□ 0.21
AC007424.1-202ENST00000550548 IPO4Q8TEX9 1081 aaKnown RBP16.39■□□□□ 0.21
AC007424.1-202ENST00000550548 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
AC007424.1-202ENST00000550548 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
AC007424.1-202ENST00000550548 C14orf37Q86TY3 774 aa16.36■□□□□ 0.21
AC007424.1-202ENST00000550548 BACH2Q9BYV9 841 aa16.36■□□□□ 0.21
AC007424.1-202ENST00000550548 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
AC007424.1-202ENST00000550548 PDE4AP27815 886 aa16.35■□□□□ 0.21
AC007424.1-202ENST00000550548 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
AC007424.1-202ENST00000550548 CLIP1P30622 1438 aa16.34■□□□□ 0.21
AC007424.1-202ENST00000550548 RGS3P49796 1198 aa16.33■□□□□ 0.2
AC007424.1-202ENST00000550548 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
AC007424.1-202ENST00000550548 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
AC007424.1-202ENST00000550548 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
AC007424.1-202ENST00000550548 MAP7D2Q96T17 732 aa16.31■□□□□ 0.2
AC007424.1-202ENST00000550548 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
AC007424.1-202ENST00000550548 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
AC007424.1-202ENST00000550548 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
AC007424.1-202ENST00000550548 SMAP1Q8IYB5 467 aaPredicted RBP16.29■□□□□ 0.2
AC007424.1-202ENST00000550548 ZFP91Q96JP5 570 aaPredicted RBP16.29■□□□□ 0.2
AC007424.1-202ENST00000550548 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
AC007424.1-202ENST00000550548 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
AC007424.1-202ENST00000550548 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
AC007424.1-202ENST00000550548 BCCIPQ9P287 314 aaKnown RBP eCLIP16.25■□□□□ 0.19
AC007424.1-202ENST00000550548 ABCC8Q09428 1581 aa16.22■□□□□ 0.19
AC007424.1-202ENST00000550548 CHRM1P11229 460 aaPredicted RBP16.22■□□□□ 0.19
AC007424.1-202ENST00000550548 UTP14CQ5TAP6 766 aaKnown RBP16.21■□□□□ 0.19
AC007424.1-202ENST00000550548 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
AC007424.1-202ENST00000550548 TEX2Q8IWB9 1127 aa16.2■□□□□ 0.18
AC007424.1-202ENST00000550548 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
AC007424.1-202ENST00000550548 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
AC007424.1-202ENST00000550548 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
AC007424.1-202ENST00000550548 TERF1P54274 439 aa16.18■□□□□ 0.18
AC007424.1-202ENST00000550548 SOGA1O94964 1423 aa16.17■□□□□ 0.18
AC007424.1-202ENST00000550548 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
AC007424.1-202ENST00000550548 SECISBP2LQ93073 1101 aaKnown RBP16.17■□□□□ 0.18
AC007424.1-202ENST00000550548 NUDCQ9Y266 331 aa16.17■□□□□ 0.18
AC007424.1-202ENST00000550548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.16■□□□□ 0.18
AC007424.1-202ENST00000550548 TAOK2Q9UL54 1235 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms