RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
CHPT1-206ENST00000550385 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
CHPT1-206ENST00000550385 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
CHPT1-206ENST00000550385 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
CHPT1-206ENST00000550385 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
CHPT1-206ENST00000550385 FBLN2P98095 1184 aa17.08■□□□□ 0.32
CHPT1-206ENST00000550385 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
CHPT1-206ENST00000550385 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
CHPT1-206ENST00000550385 NUP160Q12769 1436 aa16.94■□□□□ 0.3
CHPT1-206ENST00000550385 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
CHPT1-206ENST00000550385 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
CHPT1-206ENST00000550385 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
CHPT1-206ENST00000550385 CHD1O14646 1710 aa16.9■□□□□ 0.3
CHPT1-206ENST00000550385 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
CHPT1-206ENST00000550385 CLIP1P30622 1438 aa16.88■□□□□ 0.29
CHPT1-206ENST00000550385 IQGAP2Q13576 1575 aa16.87■□□□□ 0.29
CHPT1-206ENST00000550385 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
CHPT1-206ENST00000550385 JPH4Q96JJ6 628 aa16.87■□□□□ 0.29
CHPT1-206ENST00000550385 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
CHPT1-206ENST00000550385 UGGT2Q9NYU1 1516 aa16.81■□□□□ 0.28
CHPT1-206ENST00000550385 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
CHPT1-206ENST00000550385 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
CHPT1-206ENST00000550385 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
CHPT1-206ENST00000550385 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
CHPT1-206ENST00000550385 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
CHPT1-206ENST00000550385 SAMD9Q5K651 1589 aa16.73■□□□□ 0.27
CHPT1-206ENST00000550385 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
CHPT1-206ENST00000550385 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
CHPT1-206ENST00000550385 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
CHPT1-206ENST00000550385 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
CHPT1-206ENST00000550385 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
CHPT1-206ENST00000550385 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
CHPT1-206ENST00000550385 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
CHPT1-206ENST00000550385 FHOD3Q2V2M9 1422 aa16.69■□□□□ 0.26
CHPT1-206ENST00000550385 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
CHPT1-206ENST00000550385 APLP2Q06481 763 aa16.65■□□□□ 0.26
CHPT1-206ENST00000550385 PTPRGP23470 1445 aa16.63■□□□□ 0.25
CHPT1-206ENST00000550385 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
CHPT1-206ENST00000550385 TTBK1Q5TCY1 1321 aaPredicted RBP16.6■□□□□ 0.25
CHPT1-206ENST00000550385 CASKIN1Q8WXD9 1431 aa16.6■□□□□ 0.25
CHPT1-206ENST00000550385 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
CHPT1-206ENST00000550385 ATP1B4Q9UN42 357 aaPredicted RBP16.59■□□□□ 0.25
CHPT1-206ENST00000550385 FYCO1Q9BQS8 1478 aa16.56■□□□□ 0.24
CHPT1-206ENST00000550385 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
CHPT1-206ENST00000550385 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
CHPT1-206ENST00000550385 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
CHPT1-206ENST00000550385 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
CHPT1-206ENST00000550385 PLB1Q6P1J6 1458 aa16.49■□□□□ 0.23
CHPT1-206ENST00000550385 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
CHPT1-206ENST00000550385 PCF11O94913 1555 aaKnown RBP16.49■□□□□ 0.23
CHPT1-206ENST00000550385 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
CHPT1-206ENST00000550385 HECW1Q76N89 1606 aa16.48■□□□□ 0.23
CHPT1-206ENST00000550385 ABCA8O94911 1581 aa16.48■□□□□ 0.23
CHPT1-206ENST00000550385 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
CHPT1-206ENST00000550385 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
CHPT1-206ENST00000550385 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
CHPT1-206ENST00000550385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
CHPT1-206ENST00000550385 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
CHPT1-206ENST00000550385 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
CHPT1-206ENST00000550385 EPRSP07814 1512 aaKnown RBP16.44■□□□□ 0.22
CHPT1-206ENST00000550385 ABCC2Q92887 1545 aa16.42■□□□□ 0.22
CHPT1-206ENST00000550385 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHPT1-206ENST00000550385 TIAM1Q13009 1591 aa16.42■□□□□ 0.22
CHPT1-206ENST00000550385 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
CHPT1-206ENST00000550385 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
CHPT1-206ENST00000550385 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
CHPT1-206ENST00000550385 PLEKHD1A6NEE1 506 aa16.4■□□□□ 0.22
CHPT1-206ENST00000550385 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
CHPT1-206ENST00000550385 ATP10BO94823 1461 aa16.4■□□□□ 0.22
CHPT1-206ENST00000550385 ARID3CA6NKF2 412 aa16.39■□□□□ 0.21
CHPT1-206ENST00000550385 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
CHPT1-206ENST00000550385 MTUS2Q5JR59 1369 aa16.38■□□□□ 0.21
CHPT1-206ENST00000550385 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
CHPT1-206ENST00000550385 PPARGC1BQ86YN6 1023 aaKnown RBP16.38■□□□□ 0.21
CHPT1-206ENST00000550385 CFAP43Q8NDM7 1665 aa16.36■□□□□ 0.21
CHPT1-206ENST00000550385 CDK13Q14004 1512 aaKnown RBP16.35■□□□□ 0.21
CHPT1-206ENST00000550385 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
CHPT1-206ENST00000550385 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
CHPT1-206ENST00000550385 DNAJC5Q9H3Z4 198 aa16.34■□□□□ 0.21
CHPT1-206ENST00000550385 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.21
CHPT1-206ENST00000550385 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
CHPT1-206ENST00000550385 EHBP1L1Q8N3D4 1523 aa16.31■□□□□ 0.2
CHPT1-206ENST00000550385 TROQ12816 1431 aaPredicted RBP16.3■□□□□ 0.2
CHPT1-206ENST00000550385 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
CHPT1-206ENST00000550385 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
CHPT1-206ENST00000550385 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
CHPT1-206ENST00000550385 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
CHPT1-206ENST00000550385 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
CHPT1-206ENST00000550385 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
CHPT1-206ENST00000550385 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
CHPT1-206ENST00000550385 ASXL2Q76L83 1435 aa16.21■□□□□ 0.19
CHPT1-206ENST00000550385 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.19
CHPT1-206ENST00000550385 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
CHPT1-206ENST00000550385 KIF14Q15058 1648 aa16.19■□□□□ 0.18
CHPT1-206ENST00000550385 PHLDB1Q86UU1 1377 aa16.18■□□□□ 0.18
CHPT1-206ENST00000550385 MAPKBP1O60336 1514 aa16.17■□□□□ 0.18
CHPT1-206ENST00000550385 MYOM3Q5VTT5 1437 aa16.16■□□□□ 0.18
CHPT1-206ENST00000550385 MIA2Q96PC5 1412 aa16.15■□□□□ 0.18
CHPT1-206ENST00000550385 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
CHPT1-206ENST00000550385 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms