RNA–Protein interactions for RNA: ENST00000550290.2

AC048341.2-201, humanhuman

TSL 4 BASIC

Gene AC048341.2, Length 8,693 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048341.2-201ENST00000550290 CUX1P39880 1505 aa8.54□□□□□ -1.04
AC048341.2-201ENST00000550290 CDK11AQ9UQ88 783 aaPredicted RBP8.54□□□□□ -1.04
AC048341.2-201ENST00000550290 CARMIL2Q6F5E8 1435 aa8.54□□□□□ -1.04
AC048341.2-201ENST00000550290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.54□□□□□ -1.04
AC048341.2-201ENST00000550290 STAG3Q9UJ98 1225 aa8.54□□□□□ -1.04
AC048341.2-201ENST00000550290 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
AC048341.2-201ENST00000550290 PRG4Q92954 1404 aaPredicted RBP8.53□□□□□ -1.04
AC048341.2-201ENST00000550290 CHGAP10645 457 aaKnown RBP8.52□□□□□ -1.05
AC048341.2-201ENST00000550290 WDR62O43379 1518 aa8.52□□□□□ -1.05
AC048341.2-201ENST00000550290 PEG3Q9GZU2 1588 aa8.52□□□□□ -1.05
AC048341.2-201ENST00000550290 EIF4G3O43432 1585 aaKnown RBP8.5□□□□□ -1.05
AC048341.2-201ENST00000550290 PTPRGP23470 1445 aa8.5□□□□□ -1.05
AC048341.2-201ENST00000550290 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
AC048341.2-201ENST00000550290 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
AC048341.2-201ENST00000550290 CHD1O14646 1710 aa8.48□□□□□ -1.05
AC048341.2-201ENST00000550290 TSPOAP1O95153 1857 aa8.47□□□□□ -1.05
AC048341.2-201ENST00000550290 RUSC2Q8N2Y8 1516 aa8.46□□□□□ -1.05
AC048341.2-201ENST00000550290 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
AC048341.2-201ENST00000550290 CHIC2Q9UKJ5 165 aa8.46□□□□□ -1.06
AC048341.2-201ENST00000550290 SYNJ2O15056 1496 aa8.44□□□□□ -1.06
AC048341.2-201ENST00000550290 FHAD1B1AJZ9 1412 aa8.44□□□□□ -1.06
AC048341.2-201ENST00000550290 PBRM1Q86U86 1689 aa8.42□□□□□ -1.06
AC048341.2-201ENST00000550290 GGT6Q6P531 493 aa8.41□□□□□ -1.06
AC048341.2-201ENST00000550290 SLC4A1APQ9BWU0 796 aaKnown RBP8.4□□□□□ -1.07
AC048341.2-201ENST00000550290 RAPGEF2Q9Y4G8 1499 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 RIMBP3CA6NJZ7 1639 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 RIMBP3BA6NNM3 1639 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 RIMBP3Q9UFD9 1639 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 GRIN2AQ12879 1464 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 MAGI1Q96QZ7 1491 aaPredicted RBP8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 IGF1RP08069 1367 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 MTUS2Q5JR59 1369 aa8.39□□□□□ -1.07
AC048341.2-201ENST00000550290 ARHGEF11O15085 1522 aa8.38□□□□□ -1.07
AC048341.2-201ENST00000550290 FHOD3Q2V2M9 1422 aa8.38□□□□□ -1.07
AC048341.2-201ENST00000550290 TNIKQ9UKE5 1360 aa8.37□□□□□ -1.07
AC048341.2-201ENST00000550290 CFDP1Q9UEE9 299 aaPredicted RBP8.36□□□□□ -1.07
AC048341.2-201ENST00000550290 RAPGEF3O95398 923 aa8.35□□□□□ -1.07
AC048341.2-201ENST00000550290 HNRNPMP52272 730 aaKnown RBP eCLIP8.35□□□□□ -1.07
AC048341.2-201ENST00000550290 TOP2BQ02880 1626 aa8.35□□□□□ -1.07
AC048341.2-201ENST00000550290 TSPY4P0CV99 314 aa8.35□□□□□ -1.07
AC048341.2-201ENST00000550290 TSPY10P0CW01 314 aa8.35□□□□□ -1.07
AC048341.2-201ENST00000550290 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
AC048341.2-201ENST00000550290 POLR3GLQ9BT43 218 aa8.32□□□□□ -1.08
AC048341.2-201ENST00000550290 ABCA10Q8WWZ4 1543 aa8.32□□□□□ -1.08
AC048341.2-201ENST00000550290 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
AC048341.2-201ENST00000550290 RRP7BPQ9NSQ0 103 aa8.31□□□□□ -1.08
AC048341.2-201ENST00000550290 GOLGA3Q08378 1498 aa8.3□□□□□ -1.08
AC048341.2-201ENST00000550290 CNGB1Q14028 1251 aaPredicted RBP8.3□□□□□ -1.08
AC048341.2-201ENST00000550290 PCGF6Q9BYE7 350 aa8.3□□□□□ -1.08
AC048341.2-201ENST00000550290 CLIP1P30622 1438 aa8.3□□□□□ -1.08
AC048341.2-201ENST00000550290 EFCAB2Q5VUJ9 269 aa8.29□□□□□ -1.08
AC048341.2-201ENST00000550290 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
AC048341.2-201ENST00000550290 PIP4K2BP78356 416 aa8.28□□□□□ -1.08
AC048341.2-201ENST00000550290 ARAP1Q96P48 1450 aa8.27□□□□□ -1.09
AC048341.2-201ENST00000550290 CEP170Q5SW79 1584 aa8.27□□□□□ -1.09
AC048341.2-201ENST00000550290 NUTM2DQ5VT03 806 aaPredicted RBP8.26□□□□□ -1.09
AC048341.2-201ENST00000550290 CCNB3Q8WWL7 1395 aa8.26□□□□□ -1.09
AC048341.2-201ENST00000550290 CD109Q6YHK3 1445 aa8.25□□□□□ -1.09
AC048341.2-201ENST00000550290 IQGAP2Q13576 1575 aa8.25□□□□□ -1.09
AC048341.2-201ENST00000550290 ADAMTS12P58397 1594 aa8.25□□□□□ -1.09
AC048341.2-201ENST00000550290 PLB1Q6P1J6 1458 aa8.25□□□□□ -1.09
AC048341.2-201ENST00000550290 ERCC6L2Q5T890 1561 aa8.25□□□□□ -1.09
AC048341.2-201ENST00000550290 CEBPAP49715 358 aaPredicted RBP8.25□□□□□ -1.09
AC048341.2-201ENST00000550290 ERICH3Q5RHP9 1530 aa8.25□□□□□ -1.09
AC048341.2-201ENST00000550290 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
AC048341.2-201ENST00000550290 KIF3BO15066 747 aa8.24□□□□□ -1.09
AC048341.2-201ENST00000550290 UACAQ9BZF9 1416 aa8.24□□□□□ -1.09
AC048341.2-201ENST00000550290 PHF23Q9BUL5 403 aaPredicted RBP8.24□□□□□ -1.09
AC048341.2-201ENST00000550290 ASXL2Q76L83 1435 aa8.24□□□□□ -1.09
AC048341.2-201ENST00000550290 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
AC048341.2-201ENST00000550290 HSPA2P54652 639 aa8.23□□□□□ -1.09
AC048341.2-201ENST00000550290 CUL7Q14999 1698 aa8.23□□□□□ -1.09
AC048341.2-201ENST00000550290 SPAG9O60271 1321 aaKnown RBP8.23□□□□□ -1.09
AC048341.2-201ENST00000550290 KIAA0586Q9BVV6 1533 aa8.22□□□□□ -1.09
AC048341.2-201ENST00000550290 A0A0G2JS52 829 aa8.22□□□□□ -1.09
AC048341.2-201ENST00000550290 NEUROD1Q13562 356 aa8.22□□□□□ -1.09
AC048341.2-201ENST00000550290 AFAP1Q8N556 730 aa8.22□□□□□ -1.09
AC048341.2-201ENST00000550290 ARHGAP5Q13017 1502 aa8.21□□□□□ -1.1
AC048341.2-201ENST00000550290 HAP1P54257 671 aaPredicted RBP8.21□□□□□ -1.1
AC048341.2-201ENST00000550290 WASHC2CQ9Y4E1 1318 aa8.2□□□□□ -1.1
AC048341.2-201ENST00000550290 MYT1Q01538 1121 aa8.2□□□□□ -1.1
AC048341.2-201ENST00000550290 EEA1Q15075 1411 aa8.19□□□□□ -1.1
AC048341.2-201ENST00000550290 LMOD2Q6P5Q4 547 aa8.19□□□□□ -1.1
AC048341.2-201ENST00000550290 RGL3Q3MIN7 710 aa8.18□□□□□ -1.1
AC048341.2-201ENST00000550290 KDM2AQ9Y2K7 1162 aa8.18□□□□□ -1.1
AC048341.2-201ENST00000550290 CEP162Q5TB80 1403 aa8.17□□□□□ -1.1
AC048341.2-201ENST00000550290 ABCA5Q8WWZ7 1642 aa8.17□□□□□ -1.1
AC048341.2-201ENST00000550290 FMN1Q68DA7 1419 aa8.16□□□□□ -1.1
AC048341.2-201ENST00000550290 CDK13Q14004 1512 aaKnown RBP8.16□□□□□ -1.1
AC048341.2-201ENST00000550290 ZNF644Q9H582 1327 aaPredicted RBP8.15□□□□□ -1.1
AC048341.2-201ENST00000550290 MEX3CQ5U5Q3 659 aaKnown RBP8.15□□□□□ -1.1
AC048341.2-201ENST00000550290 KDM6BO15054 1643 aa8.14□□□□□ -1.11
AC048341.2-201ENST00000550290 CTTNBP2Q8WZ74 1663 aa8.13□□□□□ -1.11
AC048341.2-201ENST00000550290 SCAPERQ9BY12 1400 aa8.13□□□□□ -1.11
AC048341.2-201ENST00000550290 KANK4Q5T7N3 995 aaPredicted RBP8.13□□□□□ -1.11
AC048341.2-201ENST00000550290 CCER1Q8TC90 406 aaPredicted RBP8.12□□□□□ -1.11
AC048341.2-201ENST00000550290 EID1Q9Y6B2 187 aa8.12□□□□□ -1.11
AC048341.2-201ENST00000550290 STK26Q9P289 416 aa8.12□□□□□ -1.11
AC048341.2-201ENST00000550290 NUTM2FA1L443 756 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms