RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 KIAA0586Q9BVV6 1533 aa27.86■■■□□ 2.05
LETMD1-220ENST00000549686 CTTNBP2Q8WZ74 1663 aa27.85■■■□□ 2.05
LETMD1-220ENST00000549686 CHD1O14646 1710 aa27.81■■■□□ 2.04
LETMD1-220ENST00000549686 CEP170Q5SW79 1584 aa27.81■■■□□ 2.04
LETMD1-220ENST00000549686 CLIP1P30622 1438 aa27.8■■■□□ 2.04
LETMD1-220ENST00000549686 IQGAP2Q13576 1575 aa27.78■■■□□ 2.04
LETMD1-220ENST00000549686 EFCAB5A4FU69 1503 aa27.71■■■□□ 2.03
LETMD1-220ENST00000549686 UGGT2Q9NYU1 1516 aa27.69■■■□□ 2.02
LETMD1-220ENST00000549686 RANGAP1P46060 587 aaPredicted RBP27.66■■■□□ 2.02
LETMD1-220ENST00000549686 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
LETMD1-220ENST00000549686 OSCARQ8IYS5 282 aa27.64■■■□□ 2.02
LETMD1-220ENST00000549686 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
LETMD1-220ENST00000549686 CLASP1Q7Z460 1538 aa27.62■■■□□ 2.01
LETMD1-220ENST00000549686 SAMD9Q5K651 1589 aa27.6■■■□□ 2.01
LETMD1-220ENST00000549686 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
LETMD1-220ENST00000549686 ARAP1Q96P48 1450 aa27.54■■■□□ 2
LETMD1-220ENST00000549686 SHROOM2Q13796 1616 aa27.53■■■□□ 2
LETMD1-220ENST00000549686 DISP1Q96F81 1524 aa27.51■■■□□ 2
LETMD1-220ENST00000549686 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
LETMD1-220ENST00000549686 KIAA0556O60303 1618 aa27.49■■□□□ 1.99
LETMD1-220ENST00000549686 FHOD3Q2V2M9 1422 aa27.48■■□□□ 1.99
LETMD1-220ENST00000549686 PRG4Q92954 1404 aaPredicted RBP27.48■■□□□ 1.99
LETMD1-220ENST00000549686 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
LETMD1-220ENST00000549686 P3H3Q8IVL6 736 aa27.46■■□□□ 1.99
LETMD1-220ENST00000549686 CASKIN1Q8WXD9 1431 aa27.32■■□□□ 1.96
LETMD1-220ENST00000549686 PTPRGP23470 1445 aa27.3■■□□□ 1.96
LETMD1-220ENST00000549686 FYCO1Q9BQS8 1478 aa27.3■■□□□ 1.96
LETMD1-220ENST00000549686 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
LETMD1-220ENST00000549686 APLP2Q06481 763 aa27.24■■□□□ 1.95
LETMD1-220ENST00000549686 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
LETMD1-220ENST00000549686 MAP3K1Q13233 1512 aa27.18■■□□□ 1.94
LETMD1-220ENST00000549686 TTBK1Q5TCY1 1321 aaPredicted RBP27.17■■□□□ 1.94
LETMD1-220ENST00000549686 HECW1Q76N89 1606 aa27.17■■□□□ 1.94
LETMD1-220ENST00000549686 RAPGEF6Q8TEU7 1601 aa27.16■■□□□ 1.94
LETMD1-220ENST00000549686 ABCA8O94911 1581 aa27.15■■□□□ 1.94
LETMD1-220ENST00000549686 ATP1B4Q9UN42 357 aaPredicted RBP27.14■■□□□ 1.94
LETMD1-220ENST00000549686 UACAQ9BZF9 1416 aa27.14■■□□□ 1.93
LETMD1-220ENST00000549686 CCDC18Q5T9S5 1454 aa27.13■■□□□ 1.93
LETMD1-220ENST00000549686 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
LETMD1-220ENST00000549686 ARHGEF11O15085 1522 aa27.12■■□□□ 1.93
LETMD1-220ENST00000549686 NUP153P49790 1475 aaKnown RBP27.08■■□□□ 1.93
LETMD1-220ENST00000549686 UHRF1BP1LA0JNW5 1464 aa27.07■■□□□ 1.92
LETMD1-220ENST00000549686 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
LETMD1-220ENST00000549686 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
LETMD1-220ENST00000549686 ABCC2Q92887 1545 aa27.05■■□□□ 1.92
LETMD1-220ENST00000549686 CFAP43Q8NDM7 1665 aa27.02■■□□□ 1.92
LETMD1-220ENST00000549686 CDK11AQ9UQ88 783 aaPredicted RBP26.99■■□□□ 1.91
LETMD1-220ENST00000549686 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
LETMD1-220ENST00000549686 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
LETMD1-220ENST00000549686 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
LETMD1-220ENST00000549686 LRRC9Q6ZRR7 1453 aa26.96■■□□□ 1.91
LETMD1-220ENST00000549686 ATP10BO94823 1461 aa26.94■■□□□ 1.9
LETMD1-220ENST00000549686 CDK13Q14004 1512 aaKnown RBP26.94■■□□□ 1.9
LETMD1-220ENST00000549686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
LETMD1-220ENST00000549686 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
LETMD1-220ENST00000549686 KANK4Q5T7N3 995 aaPredicted RBP26.92■■□□□ 1.9
LETMD1-220ENST00000549686 LRRIQ1Q96JM4 1722 aa26.92■■□□□ 1.9
LETMD1-220ENST00000549686 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
LETMD1-220ENST00000549686 KDM5BQ9UGL1 1544 aa26.91■■□□□ 1.9
LETMD1-220ENST00000549686 ARID3CA6NKF2 412 aa26.89■■□□□ 1.9
LETMD1-220ENST00000549686 EHBP1L1Q8N3D4 1523 aa26.89■■□□□ 1.89
LETMD1-220ENST00000549686 ADCY10Q96PN6 1610 aa26.88■■□□□ 1.89
LETMD1-220ENST00000549686 PPARGC1BQ86YN6 1023 aaKnown RBP26.86■■□□□ 1.89
LETMD1-220ENST00000549686 PLEKHD1A6NEE1 506 aa26.85■■□□□ 1.89
LETMD1-220ENST00000549686 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
LETMD1-220ENST00000549686 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
LETMD1-220ENST00000549686 NPM1P06748 294 aaKnown RBP eCLIP26.83■■□□□ 1.89
LETMD1-220ENST00000549686 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
LETMD1-220ENST00000549686 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
LETMD1-220ENST00000549686 SUPT6HQ7KZ85 1726 aaKnown RBP26.74■■□□□ 1.87
LETMD1-220ENST00000549686 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
LETMD1-220ENST00000549686 NCOA2Q15596 1464 aa26.72■■□□□ 1.87
LETMD1-220ENST00000549686 TRIM26Q12899 539 aaPredicted RBP26.69■■□□□ 1.86
LETMD1-220ENST00000549686 KIF14Q15058 1648 aa26.67■■□□□ 1.86
LETMD1-220ENST00000549686 WDR7Q9Y4E6 1490 aa26.67■■□□□ 1.86
LETMD1-220ENST00000549686 ASXL2Q76L83 1435 aa26.65■■□□□ 1.86
LETMD1-220ENST00000549686 PHLDB1Q86UU1 1377 aa26.64■■□□□ 1.86
LETMD1-220ENST00000549686 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
LETMD1-220ENST00000549686 MYOM3Q5VTT5 1437 aa26.61■■□□□ 1.85
LETMD1-220ENST00000549686 CCNB3Q8WWL7 1395 aa26.6■■□□□ 1.85
LETMD1-220ENST00000549686 RRBP1Q9P2E9 1410 aaKnown RBP26.6■■□□□ 1.85
LETMD1-220ENST00000549686 ABCC10Q5T3U5 1492 aa26.59■■□□□ 1.85
LETMD1-220ENST00000549686 MIA2Q96PC5 1412 aa26.56■■□□□ 1.84
LETMD1-220ENST00000549686 KCNH8Q96L42 1107 aa26.55■■□□□ 1.84
LETMD1-220ENST00000549686 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
LETMD1-220ENST00000549686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.52■■□□□ 1.84
LETMD1-220ENST00000549686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.51■■□□□ 1.83
LETMD1-220ENST00000549686 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
LETMD1-220ENST00000549686 ITSN2Q9NZM3 1697 aa26.49■■□□□ 1.83
LETMD1-220ENST00000549686 CFDP1Q9UEE9 299 aaPredicted RBP26.46■■□□□ 1.83
LETMD1-220ENST00000549686 TTC37Q6PGP7 1564 aa26.45■■□□□ 1.82
LETMD1-220ENST00000549686 TCOF1Q13428 1488 aaKnown RBP26.44■■□□□ 1.82
LETMD1-220ENST00000549686 ABCA9Q8IUA7 1624 aa26.44■■□□□ 1.82
LETMD1-220ENST00000549686 ARAP3Q8WWN8 1544 aa26.43■■□□□ 1.82
LETMD1-220ENST00000549686 PLCH2O75038 1416 aa26.42■■□□□ 1.82
LETMD1-220ENST00000549686 PCGF6Q9BYE7 350 aa26.41■■□□□ 1.82
LETMD1-220ENST00000549686 PREX2Q70Z35 1606 aa26.4■■□□□ 1.82
LETMD1-220ENST00000549686 PTPN23Q9H3S7 1636 aa26.4■■□□□ 1.82
LETMD1-220ENST00000549686 FAM50AQ14320 339 aaKnown RBP26.4■■□□□ 1.82
LETMD1-220ENST00000549686 GLI2P10070 1586 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms