RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 CEP170Q5SW79 1584 aa19.77■□□□□ 0.76
ERBB3-208ENST00000549205 NUP160Q12769 1436 aa19.75■□□□□ 0.75
ERBB3-208ENST00000549205 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
ERBB3-208ENST00000549205 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
ERBB3-208ENST00000549205 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
ERBB3-208ENST00000549205 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
ERBB3-208ENST00000549205 CLIP1P30622 1438 aa19.63■□□□□ 0.73
ERBB3-208ENST00000549205 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
ERBB3-208ENST00000549205 EFCAB5A4FU69 1503 aa19.6■□□□□ 0.73
ERBB3-208ENST00000549205 SAMD9Q5K651 1589 aa19.59■□□□□ 0.73
ERBB3-208ENST00000549205 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
ERBB3-208ENST00000549205 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.72
ERBB3-208ENST00000549205 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
ERBB3-208ENST00000549205 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
ERBB3-208ENST00000549205 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
ERBB3-208ENST00000549205 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
ERBB3-208ENST00000549205 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
ERBB3-208ENST00000549205 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
ERBB3-208ENST00000549205 FHOD3Q2V2M9 1422 aa19.46■□□□□ 0.71
ERBB3-208ENST00000549205 CARMIL2Q6F5E8 1435 aa19.46■□□□□ 0.71
ERBB3-208ENST00000549205 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
ERBB3-208ENST00000549205 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
ERBB3-208ENST00000549205 VPS8Q8N3P4 1428 aa19.41■□□□□ 0.7
ERBB3-208ENST00000549205 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
ERBB3-208ENST00000549205 FMN1Q68DA7 1419 aa19.37■□□□□ 0.69
ERBB3-208ENST00000549205 PCF11O94913 1555 aaKnown RBP19.34■□□□□ 0.69
ERBB3-208ENST00000549205 FYCO1Q9BQS8 1478 aa19.3■□□□□ 0.68
ERBB3-208ENST00000549205 PTPRGP23470 1445 aa19.3■□□□□ 0.68
ERBB3-208ENST00000549205 CASKIN1Q8WXD9 1431 aa19.3■□□□□ 0.68
ERBB3-208ENST00000549205 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
ERBB3-208ENST00000549205 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
ERBB3-208ENST00000549205 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
ERBB3-208ENST00000549205 HECW1Q76N89 1606 aa19.26■□□□□ 0.67
ERBB3-208ENST00000549205 ABCA8O94911 1581 aa19.26■□□□□ 0.67
ERBB3-208ENST00000549205 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
ERBB3-208ENST00000549205 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
ERBB3-208ENST00000549205 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
ERBB3-208ENST00000549205 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
ERBB3-208ENST00000549205 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
ERBB3-208ENST00000549205 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
ERBB3-208ENST00000549205 NUP153P49790 1475 aaKnown RBP19.19■□□□□ 0.66
ERBB3-208ENST00000549205 UACAQ9BZF9 1416 aa19.18■□□□□ 0.66
ERBB3-208ENST00000549205 MAP3K1Q13233 1512 aa19.18■□□□□ 0.66
ERBB3-208ENST00000549205 ABCC2Q92887 1545 aa19.17■□□□□ 0.66
ERBB3-208ENST00000549205 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
ERBB3-208ENST00000549205 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
ERBB3-208ENST00000549205 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
ERBB3-208ENST00000549205 UHRF1BP1LA0JNW5 1464 aa19.16■□□□□ 0.66
ERBB3-208ENST00000549205 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
ERBB3-208ENST00000549205 APLP2Q06481 763 aa19.15■□□□□ 0.66
ERBB3-208ENST00000549205 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
ERBB3-208ENST00000549205 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
ERBB3-208ENST00000549205 ATP10BO94823 1461 aa19.08■□□□□ 0.64
ERBB3-208ENST00000549205 ZCCHC11Q5TAX3 1644 aaKnown RBP19.07■□□□□ 0.64
ERBB3-208ENST00000549205 KDM5BQ9UGL1 1544 aa19.06■□□□□ 0.64
ERBB3-208ENST00000549205 LRRC9Q6ZRR7 1453 aa19.06■□□□□ 0.64
ERBB3-208ENST00000549205 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
ERBB3-208ENST00000549205 KANK4Q5T7N3 995 aaPredicted RBP19.03■□□□□ 0.64
ERBB3-208ENST00000549205 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
ERBB3-208ENST00000549205 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
ERBB3-208ENST00000549205 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
ERBB3-208ENST00000549205 PPARGC1BQ86YN6 1023 aaKnown RBP19.01■□□□□ 0.63
ERBB3-208ENST00000549205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
ERBB3-208ENST00000549205 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
ERBB3-208ENST00000549205 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
ERBB3-208ENST00000549205 CDK11AQ9UQ88 783 aaPredicted RBP18.99■□□□□ 0.63
ERBB3-208ENST00000549205 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
ERBB3-208ENST00000549205 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
ERBB3-208ENST00000549205 TROQ12816 1431 aaPredicted RBP18.96■□□□□ 0.63
ERBB3-208ENST00000549205 PLEKHD1A6NEE1 506 aa18.94■□□□□ 0.62
ERBB3-208ENST00000549205 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
ERBB3-208ENST00000549205 KIF14Q15058 1648 aa18.91■□□□□ 0.62
ERBB3-208ENST00000549205 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
ERBB3-208ENST00000549205 WDR7Q9Y4E6 1490 aa18.89■□□□□ 0.61
ERBB3-208ENST00000549205 ASXL2Q76L83 1435 aa18.88■□□□□ 0.61
ERBB3-208ENST00000549205 MAPKBP1O60336 1514 aa18.88■□□□□ 0.61
ERBB3-208ENST00000549205 CDC42BPAQ5VT25 1732 aa18.83■□□□□ 0.61
ERBB3-208ENST00000549205 PHLDB1Q86UU1 1377 aa18.83■□□□□ 0.61
ERBB3-208ENST00000549205 ABCC10Q5T3U5 1492 aa18.83■□□□□ 0.6
ERBB3-208ENST00000549205 ITSN2Q9NZM3 1697 aa18.82■□□□□ 0.6
ERBB3-208ENST00000549205 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
ERBB3-208ENST00000549205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.8■□□□□ 0.6
ERBB3-208ENST00000549205 MYOM3Q5VTT5 1437 aa18.8■□□□□ 0.6
ERBB3-208ENST00000549205 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
ERBB3-208ENST00000549205 ABCA9Q8IUA7 1624 aa18.79■□□□□ 0.6
ERBB3-208ENST00000549205 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
ERBB3-208ENST00000549205 CCNB3Q8WWL7 1395 aa18.78■□□□□ 0.6
ERBB3-208ENST00000549205 PREX2Q70Z35 1606 aa18.77■□□□□ 0.6
ERBB3-208ENST00000549205 CDC42BPBQ9Y5S2 1711 aa18.77■□□□□ 0.59
ERBB3-208ENST00000549205 RRBP1Q9P2E9 1410 aaKnown RBP18.76■□□□□ 0.59
ERBB3-208ENST00000549205 GPATCH8Q9UKJ3 1502 aaKnown RBP18.76■□□□□ 0.59
ERBB3-208ENST00000549205 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
ERBB3-208ENST00000549205 TRIM26Q12899 539 aaPredicted RBP18.74■□□□□ 0.59
ERBB3-208ENST00000549205 MIA2Q96PC5 1412 aa18.73■□□□□ 0.59
ERBB3-208ENST00000549205 GLI2P10070 1586 aa18.72■□□□□ 0.59
ERBB3-208ENST00000549205 DIP2BQ9P265 1576 aa18.72■□□□□ 0.59
ERBB3-208ENST00000549205 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
ERBB3-208ENST00000549205 KIF13AQ9H1H9 1805 aa18.72■□□□□ 0.59
ERBB3-208ENST00000549205 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
ERBB3-208ENST00000549205 MAP3K4Q9Y6R4 1608 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms