RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ABCC10Q5T3U5 1492 aa27.64■■■□□ 2.01
CHMP1A-206ENST00000549139 RUSC2Q8N2Y8 1516 aa27.61■■■□□ 2.01
CHMP1A-206ENST00000549139 FAM69CQ0P6D2 419 aa27.59■■■□□ 2.01
CHMP1A-206ENST00000549139 MAPKBP1O60336 1514 aa27.58■■■□□ 2.01
CHMP1A-206ENST00000549139 DIP2BQ9P265 1576 aa27.54■■■□□ 2
CHMP1A-206ENST00000549139 ADCY10Q96PN6 1610 aa27.52■■■□□ 2
CHMP1A-206ENST00000549139 NPM1P06748 294 aaKnown RBP eCLIP27.51■■□□□ 1.99
CHMP1A-206ENST00000549139 KIAA0586Q9BVV6 1533 aa27.43■■□□□ 1.98
CHMP1A-206ENST00000549139 KDM4FA0A1W2PPD8 638 aa27.41■■□□□ 1.98
CHMP1A-206ENST00000549139 KDM6BO15054 1643 aa27.39■■□□□ 1.98
CHMP1A-206ENST00000549139 IGF1RP08069 1367 aa27.38■■□□□ 1.97
CHMP1A-206ENST00000549139 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
CHMP1A-206ENST00000549139 CUL7Q14999 1698 aa27.28■■□□□ 1.96
CHMP1A-206ENST00000549139 KIF27Q86VH2 1401 aa27.26■■□□□ 1.95
CHMP1A-206ENST00000549139 PTPRGP23470 1445 aa27.25■■□□□ 1.95
CHMP1A-206ENST00000549139 ABCC2Q92887 1545 aa27.19■■□□□ 1.94
CHMP1A-206ENST00000549139 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
CHMP1A-206ENST00000549139 PPRC1Q5VV67 1664 aaKnown RBP27.16■■□□□ 1.94
CHMP1A-206ENST00000549139 GLI2P10070 1586 aa27.15■■□□□ 1.94
CHMP1A-206ENST00000549139 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.94
CHMP1A-206ENST00000549139 ASXL2Q76L83 1435 aa27.14■■□□□ 1.93
CHMP1A-206ENST00000549139 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
CHMP1A-206ENST00000549139 CARMIL2Q6F5E8 1435 aa27.12■■□□□ 1.93
CHMP1A-206ENST00000549139 UHRF1BP1LA0JNW5 1464 aa27.1■■□□□ 1.93
CHMP1A-206ENST00000549139 TTBK1Q5TCY1 1321 aaPredicted RBP27.1■■□□□ 1.93
CHMP1A-206ENST00000549139 IQGAP2Q13576 1575 aa27.06■■□□□ 1.92
CHMP1A-206ENST00000549139 ILDR1Q86SU0 546 aaPredicted RBP27.04■■□□□ 1.92
CHMP1A-206ENST00000549139 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
CHMP1A-206ENST00000549139 COL17A1Q9UMD9 1497 aaPredicted RBP27.04■■□□□ 1.92
CHMP1A-206ENST00000549139 DISP1Q96F81 1524 aa27.03■■□□□ 1.92
CHMP1A-206ENST00000549139 ADGRL1O94910 1474 aa27.02■■□□□ 1.92
CHMP1A-206ENST00000549139 EPRSP07814 1512 aaKnown RBP26.99■■□□□ 1.91
CHMP1A-206ENST00000549139 KDM5BQ9UGL1 1544 aa26.99■■□□□ 1.91
CHMP1A-206ENST00000549139 MAP3K4Q9Y6R4 1608 aa26.97■■□□□ 1.91
CHMP1A-206ENST00000549139 UGGT2Q9NYU1 1516 aa26.91■■□□□ 1.9
CHMP1A-206ENST00000549139 TEX14Q8IWB6 1497 aa26.89■■□□□ 1.9
CHMP1A-206ENST00000549139 ZCCHC11Q5TAX3 1644 aaKnown RBP26.89■■□□□ 1.9
CHMP1A-206ENST00000549139 KIAA0556O60303 1618 aa26.83■■□□□ 1.89
CHMP1A-206ENST00000549139 RAPGEF2Q9Y4G8 1499 aa26.83■■□□□ 1.89
CHMP1A-206ENST00000549139 HECW2Q9P2P5 1572 aa26.82■■□□□ 1.88
CHMP1A-206ENST00000549139 WDR7Q9Y4E6 1490 aa26.79■■□□□ 1.88
CHMP1A-206ENST00000549139 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.87
CHMP1A-206ENST00000549139 CD109Q6YHK3 1445 aa26.67■■□□□ 1.86
CHMP1A-206ENST00000549139 CFAP43Q8NDM7 1665 aa26.66■■□□□ 1.86
CHMP1A-206ENST00000549139 ABCA8O94911 1581 aa26.66■■□□□ 1.86
CHMP1A-206ENST00000549139 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
CHMP1A-206ENST00000549139 KCNH8Q96L42 1107 aa26.6■■□□□ 1.85
CHMP1A-206ENST00000549139 GOLGA3Q08378 1498 aa26.6■■□□□ 1.85
CHMP1A-206ENST00000549139 KIF21BO75037 1637 aa26.53■■□□□ 1.84
CHMP1A-206ENST00000549139 ARAP3Q8WWN8 1544 aa26.52■■□□□ 1.84
CHMP1A-206ENST00000549139 PRXQ9BXM0 1461 aa26.48■■□□□ 1.83
CHMP1A-206ENST00000549139 ATP10BO94823 1461 aa26.42■■□□□ 1.82
CHMP1A-206ENST00000549139 ADAMTSL3P82987 1691 aa26.39■■□□□ 1.82
CHMP1A-206ENST00000549139 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.81
CHMP1A-206ENST00000549139 PHLDB1Q86UU1 1377 aa26.38■■□□□ 1.81
CHMP1A-206ENST00000549139 PTPRMP28827 1452 aa26.37■■□□□ 1.81
CHMP1A-206ENST00000549139 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
CHMP1A-206ENST00000549139 FBXO41Q8TF61 875 aa26.37■■□□□ 1.81
CHMP1A-206ENST00000549139 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
CHMP1A-206ENST00000549139 RAPGEF3O95398 923 aa26.32■■□□□ 1.8
CHMP1A-206ENST00000549139 P3H3Q8IVL6 736 aa26.31■■□□□ 1.8
CHMP1A-206ENST00000549139 NEO1Q92859 1461 aa26.3■■□□□ 1.8
CHMP1A-206ENST00000549139 FRMPD1Q5SYB0 1578 aa26.27■■□□□ 1.8
CHMP1A-206ENST00000549139 BCORL1Q5H9F3 1711 aa26.26■■□□□ 1.79
CHMP1A-206ENST00000549139 SAMD9Q5K651 1589 aa26.26■■□□□ 1.79
CHMP1A-206ENST00000549139 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
CHMP1A-206ENST00000549139 EEA1Q15075 1411 aa26.23■■□□□ 1.79
CHMP1A-206ENST00000549139 RAPGEF6Q8TEU7 1601 aa26.23■■□□□ 1.79
CHMP1A-206ENST00000549139 MADDQ8WXG6 1647 aa26.21■■□□□ 1.79
CHMP1A-206ENST00000549139 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
CHMP1A-206ENST00000549139 PCF11O94913 1555 aaKnown RBP26.2■■□□□ 1.79
CHMP1A-206ENST00000549139 LMTK3Q96Q04 1460 aa26.19■■□□□ 1.78
CHMP1A-206ENST00000549139 NUP153P49790 1475 aaKnown RBP26.17■■□□□ 1.78
CHMP1A-206ENST00000549139 ARID4BQ4LE39 1312 aaPredicted RBP26.14■■□□□ 1.78
CHMP1A-206ENST00000549139 ARHGEF40Q8TER5 1519 aa26.14■■□□□ 1.77
CHMP1A-206ENST00000549139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
CHMP1A-206ENST00000549139 HNRNPUL2Q1KMD3 747 aaKnown RBP26.12■■□□□ 1.77
CHMP1A-206ENST00000549139 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
CHMP1A-206ENST00000549139 FHOD3Q2V2M9 1422 aa26.09■■□□□ 1.77
CHMP1A-206ENST00000549139 DENND4BO75064 1496 aaPredicted RBP26.09■■□□□ 1.77
CHMP1A-206ENST00000549139 RIMS1Q86UR5 1692 aaKnown RBP26.09■■□□□ 1.77
CHMP1A-206ENST00000549139 AKNAQ7Z591 1439 aa26.07■■□□□ 1.76
CHMP1A-206ENST00000549139 FANCAO15360 1455 aa26.03■■□□□ 1.76
CHMP1A-206ENST00000549139 PLEKHD1A6NEE1 506 aa26.02■■□□□ 1.76
CHMP1A-206ENST00000549139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.76
CHMP1A-206ENST00000549139 SIGLEC1Q9BZZ2 1709 aa26.02■■□□□ 1.76
CHMP1A-206ENST00000549139 ZMYM4Q5VZL5 1548 aa26.01■■□□□ 1.75
CHMP1A-206ENST00000549139 HSPA2P54652 639 aa26■■□□□ 1.75
CHMP1A-206ENST00000549139 CFAP74Q9C0B2 1584 aa25.99■■□□□ 1.75
CHMP1A-206ENST00000549139 YEATS2Q9ULM3 1422 aa25.97■■□□□ 1.75
CHMP1A-206ENST00000549139 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
CHMP1A-206ENST00000549139 POGZQ7Z3K3 1410 aa25.97■■□□□ 1.75
CHMP1A-206ENST00000549139 ZFYVE16Q7Z3T8 1539 aa25.95■■□□□ 1.74
CHMP1A-206ENST00000549139 MAGI2Q86UL8 1455 aa25.94■■□□□ 1.74
CHMP1A-206ENST00000549139 RANGAP1P46060 587 aaPredicted RBP25.94■■□□□ 1.74
CHMP1A-206ENST00000549139 EFCAB5A4FU69 1503 aa25.93■■□□□ 1.74
CHMP1A-206ENST00000549139 HECW1Q76N89 1606 aa25.9■■□□□ 1.74
CHMP1A-206ENST00000549139 PLPPR3Q6T4P5 718 aa25.89■■□□□ 1.74
CHMP1A-206ENST00000549139 CERKQ8TCT0 537 aa25.87■■□□□ 1.73
CHMP1A-206ENST00000549139 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms