RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 KIAA0586Q9BVV6 1533 aa43.27■■■■■ 4.52
CHPT1-204ENST00000549128 GOLGA3Q08378 1498 aa43.22■■■■■ 4.51
CHPT1-204ENST00000549128 JPH4Q96JJ6 628 aa43.15■■■■■ 4.5
CHPT1-204ENST00000549128 UBTFP17480 764 aaKnown RBP43.13■■■■■ 4.5
CHPT1-204ENST00000549128 CTTNBP2Q8WZ74 1663 aa43.13■■■■■ 4.49
CHPT1-204ENST00000549128 IQGAP2Q13576 1575 aa43.11■■■■■ 4.49
CHPT1-204ENST00000549128 SHROOM2Q13796 1616 aa43.09■■■■■ 4.49
CHPT1-204ENST00000549128 LOC105371045A0A1W2PR82 267 aa43.03■■■■■ 4.48
CHPT1-204ENST00000549128 ARHGEF11O15085 1522 aa42.98■■■■■ 4.47
CHPT1-204ENST00000549128 ERCC6L2Q5T890 1561 aa42.98■■■■■ 4.47
CHPT1-204ENST00000549128 PRG4Q92954 1404 aaPredicted RBP42.98■■■■■ 4.47
CHPT1-204ENST00000549128 UGGT2Q9NYU1 1516 aa42.91■■■■■ 4.46
CHPT1-204ENST00000549128 RIMBP3CA6NJZ7 1639 aa42.91■■■■■ 4.46
CHPT1-204ENST00000549128 RIMBP3BA6NNM3 1639 aa42.91■■■■■ 4.46
CHPT1-204ENST00000549128 RIMBP3Q9UFD9 1639 aa42.91■■■■■ 4.46
CHPT1-204ENST00000549128 RANGAP1P46060 587 aaPredicted RBP42.89■■■■■ 4.46
CHPT1-204ENST00000549128 DISP1Q96F81 1524 aa42.83■■■■■ 4.45
CHPT1-204ENST00000549128 TNIKQ9UKE5 1360 aa42.82■■■■■ 4.45
CHPT1-204ENST00000549128 CARMIL2Q6F5E8 1435 aa42.75■■■■■ 4.43
CHPT1-204ENST00000549128 ARAP1Q96P48 1450 aa42.72■■■■■ 4.43
CHPT1-204ENST00000549128 KIAA0556O60303 1618 aa42.71■■■■■ 4.43
CHPT1-204ENST00000549128 P3H3Q8IVL6 736 aa42.69■■■■■ 4.43
CHPT1-204ENST00000549128 SAMD9Q5K651 1589 aa42.66■■■■■ 4.42
CHPT1-204ENST00000549128 TTBK1Q5TCY1 1321 aaPredicted RBP42.63■■■■■ 4.42
CHPT1-204ENST00000549128 CYB5RLQ6IPT4 315 aa42.63■■■■■ 4.41
CHPT1-204ENST00000549128 ARHGAP35Q9NRY4 1499 aa42.55■■■■■ 4.4
CHPT1-204ENST00000549128 PTPRGP23470 1445 aa42.55■■■■■ 4.4
CHPT1-204ENST00000549128 EFCAB5A4FU69 1503 aa42.54■■■■■ 4.4
CHPT1-204ENST00000549128 FHOD3Q2V2M9 1422 aa42.52■■■■■ 4.4
CHPT1-204ENST00000549128 CLIP1P30622 1438 aa42.5■■■■■ 4.39
CHPT1-204ENST00000549128 CEP162Q5TB80 1403 aa42.49■■■■■ 4.39
CHPT1-204ENST00000549128 PLB1Q6P1J6 1458 aa42.3■■■■■ 4.36
CHPT1-204ENST00000549128 UACAQ9BZF9 1416 aa42.27■■■■■ 4.36
CHPT1-204ENST00000549128 ADCY10Q96PN6 1610 aa42.22■■■■■ 4.35
CHPT1-204ENST00000549128 ABCA8O94911 1581 aa42.22■■■■■ 4.35
CHPT1-204ENST00000549128 FMN1Q68DA7 1419 aa42.17■■■■■ 4.34
CHPT1-204ENST00000549128 ABCC2Q92887 1545 aa42.16■■■■■ 4.34
CHPT1-204ENST00000549128 UHRF1BP1LA0JNW5 1464 aa42.15■■■■■ 4.34
CHPT1-204ENST00000549128 RAPGEF6Q8TEU7 1601 aa42.11■■■■■ 4.33
CHPT1-204ENST00000549128 ARID3CA6NKF2 412 aa42.05■■■■■ 4.32
CHPT1-204ENST00000549128 NUP153P49790 1475 aaKnown RBP42.01■■■■■ 4.32
CHPT1-204ENST00000549128 ATP1B4Q9UN42 357 aaPredicted RBP42■■■■■ 4.31
CHPT1-204ENST00000549128 KDM5BQ9UGL1 1544 aa41.98■■■■■ 4.31
CHPT1-204ENST00000549128 NPM1P06748 294 aaKnown RBP eCLIP41.97■■■■■ 4.31
CHPT1-204ENST00000549128 PCF11O94913 1555 aaKnown RBP41.97■■■■■ 4.31
CHPT1-204ENST00000549128 CASKIN1Q8WXD9 1431 aa41.95■■■■■ 4.31
CHPT1-204ENST00000549128 ATP10BO94823 1461 aa41.92■■■■■ 4.3
CHPT1-204ENST00000549128 ZCCHC11Q5TAX3 1644 aaKnown RBP41.9■■■■■ 4.3
CHPT1-204ENST00000549128 VPS8Q8N3P4 1428 aa41.9■■■■■ 4.3
CHPT1-204ENST00000549128 HECW1Q76N89 1606 aa41.88■■■■■ 4.29
CHPT1-204ENST00000549128 FYCO1Q9BQS8 1478 aa41.85■■■■■ 4.29
CHPT1-204ENST00000549128 EPRSP07814 1512 aaKnown RBP41.81■■■■■ 4.28
CHPT1-204ENST00000549128 CDK13Q14004 1512 aaKnown RBP41.81■■■■■ 4.28
CHPT1-204ENST00000549128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.81■■■■■ 4.28
CHPT1-204ENST00000549128 HNRNPUL2Q1KMD3 747 aaKnown RBP41.81■■■■■ 4.28
CHPT1-204ENST00000549128 LRRIQ1Q96JM4 1722 aa41.81■■■■■ 4.28
CHPT1-204ENST00000549128 MAPKBP1O60336 1514 aa41.76■■■■■ 4.28
CHPT1-204ENST00000549128 ASXL2Q76L83 1435 aa41.75■■■■■ 4.27
CHPT1-204ENST00000549128 CCDC18Q5T9S5 1454 aa41.65■■■■■ 4.26
CHPT1-204ENST00000549128 WDR7Q9Y4E6 1490 aa41.61■■■■■ 4.25
CHPT1-204ENST00000549128 PLEKHD1A6NEE1 506 aa41.59■■■■■ 4.25
CHPT1-204ENST00000549128 KCNH8Q96L42 1107 aa41.56■■■■■ 4.24
CHPT1-204ENST00000549128 ABCC10Q5T3U5 1492 aa41.52■■■■■ 4.24
CHPT1-204ENST00000549128 CDK11AQ9UQ88 783 aaPredicted RBP41.52■■■■■ 4.24
CHPT1-204ENST00000549128 MAGI3Q5TCQ9 1506 aa41.51■■■■■ 4.24
CHPT1-204ENST00000549128 TRHP20396 242 aaPredicted RBP41.5■■■■■ 4.23
CHPT1-204ENST00000549128 DIP2BQ9P265 1576 aa41.48■■■■■ 4.23
CHPT1-204ENST00000549128 FAM69CQ0P6D2 419 aa41.47■■■■■ 4.23
CHPT1-204ENST00000549128 TIAM1Q13009 1591 aa41.46■■■■■ 4.23
CHPT1-204ENST00000549128 CFAP43Q8NDM7 1665 aa41.44■■■■■ 4.22
CHPT1-204ENST00000549128 TROQ12816 1431 aaPredicted RBP41.43■■■■■ 4.22
CHPT1-204ENST00000549128 KIF13AQ9H1H9 1805 aa41.41■■■■■ 4.22
CHPT1-204ENST00000549128 MAP3K1Q13233 1512 aa41.39■■■■■ 4.22
CHPT1-204ENST00000549128 APLP2Q06481 763 aa41.38■■■■■ 4.22
CHPT1-204ENST00000549128 KANK4Q5T7N3 995 aaPredicted RBP41.37■■■■■ 4.21
CHPT1-204ENST00000549128 MTUS2Q5JR59 1369 aa41.35■■■■■ 4.21
CHPT1-204ENST00000549128 GLI2P10070 1586 aa41.34■■■■■ 4.21
CHPT1-204ENST00000549128 KIF14Q15058 1648 aa41.32■■■■■ 4.2
CHPT1-204ENST00000549128 LRRC9Q6ZRR7 1453 aa41.3■■■■■ 4.2
CHPT1-204ENST00000549128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.27■■■■■ 4.2
CHPT1-204ENST00000549128 EHBP1L1Q8N3D4 1523 aa41.26■■■■■ 4.2
CHPT1-204ENST00000549128 ABCA9Q8IUA7 1624 aa41.23■■■■■ 4.19
CHPT1-204ENST00000549128 TTC37Q6PGP7 1564 aa41.21■■■■■ 4.19
CHPT1-204ENST00000549128 MAP3K4Q9Y6R4 1608 aa41.2■■■■■ 4.19
CHPT1-204ENST00000549128 CD109Q6YHK3 1445 aa41.18■■■■■ 4.18
CHPT1-204ENST00000549128 PPARGC1BQ86YN6 1023 aaKnown RBP41.15■■■■■ 4.18
CHPT1-204ENST00000549128 TSPOAP1O95153 1857 aa41.13■■■■■ 4.18
CHPT1-204ENST00000549128 NCOA2Q15596 1464 aa41.09■■■■■ 4.17
CHPT1-204ENST00000549128 PPRC1Q5VV67 1664 aaKnown RBP41.08■■■■■ 4.17
CHPT1-204ENST00000549128 SUPT6HQ7KZ85 1726 aaKnown RBP41.07■■■■■ 4.17
CHPT1-204ENST00000549128 PLCH2O75038 1416 aa41.02■■■■■ 4.16
CHPT1-204ENST00000549128 GPATCH8Q9UKJ3 1502 aaKnown RBP40.99■■■■■ 4.15
CHPT1-204ENST00000549128 CCNB3Q8WWL7 1395 aa40.99■■■■■ 4.15
CHPT1-204ENST00000549128 MYO5CQ9NQX4 1742 aa40.98■■■■■ 4.15
CHPT1-204ENST00000549128 CDC42BPAQ5VT25 1732 aa40.96■■■■■ 4.15
CHPT1-204ENST00000549128 CDC42BPBQ9Y5S2 1711 aa40.92■■■■■ 4.14
CHPT1-204ENST00000549128 PREX2Q70Z35 1606 aa40.91■■■■■ 4.14
CHPT1-204ENST00000549128 TEX14Q8IWB6 1497 aa40.91■■■■■ 4.14
CHPT1-204ENST00000549128 PHLDB1Q86UU1 1377 aa40.89■■■■■ 4.14
CHPT1-204ENST00000549128 FANCAO15360 1455 aa40.89■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms