RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 IGF1RP08069 1367 aa19.89■□□□□ 0.77
HDAC7-228ENST00000548938 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
HDAC7-228ENST00000548938 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.77
HDAC7-228ENST00000548938 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
HDAC7-228ENST00000548938 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
HDAC7-228ENST00000548938 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
HDAC7-228ENST00000548938 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
HDAC7-228ENST00000548938 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
HDAC7-228ENST00000548938 ITGAEP38570 1179 aa19.77■□□□□ 0.76
HDAC7-228ENST00000548938 ARHGAP35Q9NRY4 1499 aa19.73■□□□□ 0.75
HDAC7-228ENST00000548938 MAPKBP1O60336 1514 aa19.72■□□□□ 0.75
HDAC7-228ENST00000548938 RAB3GAP2Q9H2M9 1393 aa19.71■□□□□ 0.75
HDAC7-228ENST00000548938 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
HDAC7-228ENST00000548938 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
HDAC7-228ENST00000548938 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
HDAC7-228ENST00000548938 BCANQ96GW7 911 aa19.64■□□□□ 0.73
HDAC7-228ENST00000548938 ANP32EQ9BTT0 268 aa19.64■□□□□ 0.73
HDAC7-228ENST00000548938 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
HDAC7-228ENST00000548938 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
HDAC7-228ENST00000548938 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
HDAC7-228ENST00000548938 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
HDAC7-228ENST00000548938 TIAM1Q13009 1591 aa19.58■□□□□ 0.73
HDAC7-228ENST00000548938 CUL7Q14999 1698 aa19.57■□□□□ 0.72
HDAC7-228ENST00000548938 FKBP8Q14318 412 aa19.57■□□□□ 0.72
HDAC7-228ENST00000548938 SETD5Q9C0A6 1442 aa19.57■□□□□ 0.72
HDAC7-228ENST00000548938 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
HDAC7-228ENST00000548938 WDR62O43379 1518 aa19.54■□□□□ 0.72
HDAC7-228ENST00000548938 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
HDAC7-228ENST00000548938 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
HDAC7-228ENST00000548938 MAP3K1Q13233 1512 aa19.52■□□□□ 0.71
HDAC7-228ENST00000548938 LRRC9Q6ZRR7 1453 aa19.5■□□□□ 0.71
HDAC7-228ENST00000548938 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.713e-7■■■■■ 30.7
HDAC7-228ENST00000548938 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
HDAC7-228ENST00000548938 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
HDAC7-228ENST00000548938 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
HDAC7-228ENST00000548938 HIRIP3Q9BW71 556 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-228ENST00000548938 ZNF608Q9ULD9 1512 aaPredicted RBP19.44■□□□□ 0.7
HDAC7-228ENST00000548938 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
HDAC7-228ENST00000548938 THOC2Q8NI27 1593 aaKnown RBP19.42■□□□□ 0.7
HDAC7-228ENST00000548938 NEFLP07196 543 aa19.42■□□□□ 0.7
HDAC7-228ENST00000548938 P3H3Q8IVL6 736 aa19.41■□□□□ 0.7
HDAC7-228ENST00000548938 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
HDAC7-228ENST00000548938 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
HDAC7-228ENST00000548938 CFAP43Q8NDM7 1665 aa19.39■□□□□ 0.69
HDAC7-228ENST00000548938 CTTNBP2Q8WZ74 1663 aa19.39■□□□□ 0.69
HDAC7-228ENST00000548938 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
HDAC7-228ENST00000548938 CCER2I3L3R5 266 aa19.38■□□□□ 0.69
HDAC7-228ENST00000548938 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
HDAC7-228ENST00000548938 RBM19Q9Y4C8 960 aaKnown RBP19.38■□□□□ 0.69
HDAC7-228ENST00000548938 TIMELESSQ9UNS1 1208 aa19.38■□□□□ 0.69
HDAC7-228ENST00000548938 ANP32CO43423 234 aa19.37■□□□□ 0.69
HDAC7-228ENST00000548938 FHOD3Q2V2M9 1422 aa19.35■□□□□ 0.69
HDAC7-228ENST00000548938 EFCAB5A4FU69 1503 aa19.34■□□□□ 0.69
HDAC7-228ENST00000548938 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
HDAC7-228ENST00000548938 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
HDAC7-228ENST00000548938 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
HDAC7-228ENST00000548938 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
HDAC7-228ENST00000548938 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.68
HDAC7-228ENST00000548938 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
HDAC7-228ENST00000548938 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
HDAC7-228ENST00000548938 FYCO1Q9BQS8 1478 aa19.24■□□□□ 0.67
HDAC7-228ENST00000548938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.23■□□□□ 0.673e-16■□□□□ 8.2
HDAC7-228ENST00000548938 FMN1Q68DA7 1419 aa19.22■□□□□ 0.67
HDAC7-228ENST00000548938 CASKIN1Q8WXD9 1431 aa19.22■□□□□ 0.67
HDAC7-228ENST00000548938 CCDC18Q5T9S5 1454 aa19.21■□□□□ 0.67
HDAC7-228ENST00000548938 IQGAP2Q13576 1575 aa19.2■□□□□ 0.66
HDAC7-228ENST00000548938 FGD6Q6ZV73 1430 aa19.19■□□□□ 0.66
HDAC7-228ENST00000548938 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
HDAC7-228ENST00000548938 MSH5O43196 834 aa19.18■□□□□ 0.66
HDAC7-228ENST00000548938 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
HDAC7-228ENST00000548938 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
HDAC7-228ENST00000548938 UACAQ9BZF9 1416 aa19.16■□□□□ 0.66
HDAC7-228ENST00000548938 HNRNPUQ00839 825 aaKnown RBP eCLIP19.15■□□□□ 0.66
HDAC7-228ENST00000548938 IRX6P78412 446 aaPredicted RBP19.14■□□□□ 0.65
HDAC7-228ENST00000548938 HFM1A2PYH4 1435 aa19.14■□□□□ 0.65
HDAC7-228ENST00000548938 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
HDAC7-228ENST00000548938 PTPN23Q9H3S7 1636 aa19.13■□□□□ 0.65
HDAC7-228ENST00000548938 KIAA0586Q9BVV6 1533 aa19.13■□□□□ 0.65
HDAC7-228ENST00000548938 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
HDAC7-228ENST00000548938 KDM5BQ9UGL1 1544 aa19.12■□□□□ 0.65
HDAC7-228ENST00000548938 UGGT2Q9NYU1 1516 aa19.11■□□□□ 0.65
HDAC7-228ENST00000548938 FBLN2P98095 1184 aa19.1■□□□□ 0.65
HDAC7-228ENST00000548938 NAIPQ13075 1403 aa19.08■□□□□ 0.65
HDAC7-228ENST00000548938 MTUS2Q5JR59 1369 aa19.08■□□□□ 0.65
HDAC7-228ENST00000548938 FANCIQ9NVI1 1328 aa19.06■□□□□ 0.64
HDAC7-228ENST00000548938 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
HDAC7-228ENST00000548938 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
HDAC7-228ENST00000548938 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
HDAC7-228ENST00000548938 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
HDAC7-228ENST00000548938 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.64
HDAC7-228ENST00000548938 NCOA2Q15596 1464 aa19.02■□□□□ 0.63
HDAC7-228ENST00000548938 HSPA5P11021 654 aaKnown RBP19.02■□□□□ 0.63
HDAC7-228ENST00000548938 NUP160Q12769 1436 aa19.01■□□□□ 0.63
HDAC7-228ENST00000548938 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
HDAC7-228ENST00000548938 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
HDAC7-228ENST00000548938 PRKCSHP14314 528 aaPredicted RBP18.99■□□□□ 0.63
HDAC7-228ENST00000548938 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
HDAC7-228ENST00000548938 ERICH6Q7L0X2 663 aa18.95■□□□□ 0.62
HDAC7-228ENST00000548938 JPH4Q96JJ6 628 aa18.95■□□□□ 0.62
HDAC7-228ENST00000548938 HECW1Q76N89 1606 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms