RNA–Protein interactions for RNA: ENST00000548909.5

ERGIC2-206, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-206ENST00000548909 POTEMA6NI47 508 aa18.01■□□□□ 0.47
ERGIC2-206ENST00000548909 ATMINO43313 823 aaPredicted RBP18.01■□□□□ 0.47
ERGIC2-206ENST00000548909 METRNQ9UJH8 293 aa18■□□□□ 0.47
ERGIC2-206ENST00000548909 POTEGQ6S5H5 508 aa17.94■□□□□ 0.46
ERGIC2-206ENST00000548909 PROM2Q8N271 834 aa17.94■□□□□ 0.46
ERGIC2-206ENST00000548909 MAMSTRQ6ZN01 415 aa17.92■□□□□ 0.46
ERGIC2-206ENST00000548909 PCDH10Q9P2E7 1040 aa17.9■□□□□ 0.46
ERGIC2-206ENST00000548909 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
ERGIC2-206ENST00000548909 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
ERGIC2-206ENST00000548909 TSPYL2Q9H2G4 693 aaPredicted RBP17.83■□□□□ 0.44
ERGIC2-206ENST00000548909 ATN1P54259 1190 aaPredicted RBP17.79■□□□□ 0.44
ERGIC2-206ENST00000548909 KIF12Q96FN5 646 aa17.79■□□□□ 0.44
ERGIC2-206ENST00000548909 SCUBE2Q9NQ36 999 aa17.74■□□□□ 0.43
ERGIC2-206ENST00000548909 BMP2KQ9NSY1 1161 aaPredicted RBP17.69■□□□□ 0.42
ERGIC2-206ENST00000548909 TIE1P35590 1138 aa17.68■□□□□ 0.42
ERGIC2-206ENST00000548909 LCE2DQ5TA82 110 aaPredicted RBP17.68■□□□□ 0.42
ERGIC2-206ENST00000548909 POTEFA5A3E0 1075 aa17.65■□□□□ 0.42
ERGIC2-206ENST00000548909 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
ERGIC2-206ENST00000548909 MAP3K13O43283 966 aa17.62■□□□□ 0.41
ERGIC2-206ENST00000548909 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
ERGIC2-206ENST00000548909 FAM163AQ96GL9 167 aaPredicted RBP17.59■□□□□ 0.41
ERGIC2-206ENST00000548909 RASEFQ8IZ41 740 aa17.56■□□□□ 0.4
ERGIC2-206ENST00000548909 MIER1Q8N108 512 aa17.56■□□□□ 0.4
ERGIC2-206ENST00000548909 SGIP1Q9BQI5 828 aa17.53■□□□□ 0.4
ERGIC2-206ENST00000548909 TTLL13PA6NNM8 815 aa17.51■□□□□ 0.39
ERGIC2-206ENST00000548909 IER5LQ5T953 404 aa17.48■□□□□ 0.39
ERGIC2-206ENST00000548909 COLQQ9Y215 455 aaPredicted RBP17.46■□□□□ 0.39
ERGIC2-206ENST00000548909 SEC24BO95487 1268 aa17.45■□□□□ 0.38
ERGIC2-206ENST00000548909 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
ERGIC2-206ENST00000548909 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
ERGIC2-206ENST00000548909 PCDHB13Q9Y5F0 798 aa17.37■□□□□ 0.37
ERGIC2-206ENST00000548909 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
ERGIC2-206ENST00000548909 NUBP1P53384 320 aa17.32■□□□□ 0.36
ERGIC2-206ENST00000548909 CDAN1Q8IWY9 1227 aa17.26■□□□□ 0.35
ERGIC2-206ENST00000548909 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
ERGIC2-206ENST00000548909 SLAIN1Q8ND83 568 aa17.21■□□□□ 0.35
ERGIC2-206ENST00000548909 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
ERGIC2-206ENST00000548909 TMEM106CQ9BVX2 250 aa17.19■□□□□ 0.34
ERGIC2-206ENST00000548909 ST18O60284 1047 aa17.16■□□□□ 0.34
ERGIC2-206ENST00000548909 PLCG2P16885 1265 aa17.16■□□□□ 0.34
ERGIC2-206ENST00000548909 IRX5P78411 483 aaPredicted RBP17.15■□□□□ 0.34
ERGIC2-206ENST00000548909 OCEL1Q9H607 264 aa17.06■□□□□ 0.32
ERGIC2-206ENST00000548909 TMEM121BQ9BXQ6 578 aaPredicted RBP17.05■□□□□ 0.32
ERGIC2-206ENST00000548909 SNPHO15079 494 aa16.99■□□□□ 0.31
ERGIC2-206ENST00000548909 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
ERGIC2-206ENST00000548909 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
ERGIC2-206ENST00000548909 PYGBP11216 843 aa16.91■□□□□ 0.3
ERGIC2-206ENST00000548909 MMRN1Q13201 1228 aa16.87■□□□□ 0.29
ERGIC2-206ENST00000548909 SPNS2Q8IVW8 549 aa16.87■□□□□ 0.29
ERGIC2-206ENST00000548909 PCDHB8Q9UN66 801 aa16.85■□□□□ 0.29
ERGIC2-206ENST00000548909 FKBP8Q14318 412 aa16.84■□□□□ 0.29
ERGIC2-206ENST00000548909 PDCD7Q8N8D1 485 aaKnown RBP16.8■□□□□ 0.28
ERGIC2-206ENST00000548909 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
ERGIC2-206ENST00000548909 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
ERGIC2-206ENST00000548909 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
ERGIC2-206ENST00000548909 MARVELD3Q96A59 401 aa16.75■□□□□ 0.27
ERGIC2-206ENST00000548909 GSE1Q14687 1217 aa16.73■□□□□ 0.27
ERGIC2-206ENST00000548909 C3orf67Q6ZVT6 689 aa16.72■□□□□ 0.27
ERGIC2-206ENST00000548909 CHRM1P11229 460 aaPredicted RBP16.71■□□□□ 0.27
ERGIC2-206ENST00000548909 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
ERGIC2-206ENST00000548909 GOLGA2Q08379 1002 aa16.68■□□□□ 0.26
ERGIC2-206ENST00000548909 EMP3P54852 163 aa16.64■□□□□ 0.25
ERGIC2-206ENST00000548909 ILDR1Q86SU0 546 aaPredicted RBP16.63■□□□□ 0.25
ERGIC2-206ENST00000548909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.25
ERGIC2-206ENST00000548909 PSEN1P49768 467 aa16.58■□□□□ 0.24
ERGIC2-206ENST00000548909 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
ERGIC2-206ENST00000548909 HS3ST6Q96QI5 342 aa16.56■□□□□ 0.24
ERGIC2-206ENST00000548909 KRTAP3-3Q9BYR6 98 aa16.56■□□□□ 0.24
ERGIC2-206ENST00000548909 KRTAP3-2Q9BYR7 98 aa16.56■□□□□ 0.24
ERGIC2-206ENST00000548909 VASPP50552 380 aaPredicted RBP16.54■□□□□ 0.24
ERGIC2-206ENST00000548909 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
ERGIC2-206ENST00000548909 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
ERGIC2-206ENST00000548909 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
ERGIC2-206ENST00000548909 PDAP1Q13442 181 aaKnown RBP16.48■□□□□ 0.23
ERGIC2-206ENST00000548909 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
ERGIC2-206ENST00000548909 BOLA1Q9Y3E2 137 aa16.41■□□□□ 0.22
ERGIC2-206ENST00000548909 HOXB3P14651 431 aaPredicted RBP16.4■□□□□ 0.22
ERGIC2-206ENST00000548909 G3V3G9 751 aa16.37■□□□□ 0.21
ERGIC2-206ENST00000548909 HOXB1P14653 301 aaPredicted RBP16.36■□□□□ 0.21
ERGIC2-206ENST00000548909 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
ERGIC2-206ENST00000548909 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
ERGIC2-206ENST00000548909 ZNF710Q8N1W2 664 aa16.29■□□□□ 0.2
ERGIC2-206ENST00000548909 SPOCK2Q92563 424 aa16.28■□□□□ 0.2
ERGIC2-206ENST00000548909 ERBB3P21860 1342 aa16.22■□□□□ 0.19
ERGIC2-206ENST00000548909 CIZ1Q9ULV3 898 aaPredicted RBP16.21■□□□□ 0.19
ERGIC2-206ENST00000548909 RIMBP2O15034 1052 aa16.19■□□□□ 0.18
ERGIC2-206ENST00000548909 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
ERGIC2-206ENST00000548909 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
ERGIC2-206ENST00000548909 RNF166Q96A37 237 aaPredicted RBP16.13■□□□□ 0.17
ERGIC2-206ENST00000548909 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
ERGIC2-206ENST00000548909 EFCAB3Q8N7B9 438 aa16.11■□□□□ 0.17
ERGIC2-206ENST00000548909 VARS2Q5ST30 1063 aaKnown RBP16.09■□□□□ 0.17
ERGIC2-206ENST00000548909 ZNF687Q8N1G0 1237 aa16.08■□□□□ 0.16
ERGIC2-206ENST00000548909 MICALL2Q8IY33 904 aa16.06■□□□□ 0.16
ERGIC2-206ENST00000548909 MYT1LQ9UL68 1186 aa16.05■□□□□ 0.16
ERGIC2-206ENST00000548909 TMEM92Q6UXU6 159 aa16.04■□□□□ 0.16
ERGIC2-206ENST00000548909 PTGER2P43116 358 aa16.02■□□□□ 0.16
ERGIC2-206ENST00000548909 GPR153Q6NV75 609 aa16.02■□□□□ 0.16
ERGIC2-206ENST00000548909 SOX12O15370 315 aa16.01■□□□□ 0.15
ERGIC2-206ENST00000548909 MS4A4AQ96JQ5 239 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms