RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
AC007540.1-201ENST00000548473 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
AC007540.1-201ENST00000548473 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
AC007540.1-201ENST00000548473 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
AC007540.1-201ENST00000548473 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
AC007540.1-201ENST00000548473 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
AC007540.1-201ENST00000548473 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
AC007540.1-201ENST00000548473 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
AC007540.1-201ENST00000548473 FAM9AQ8IZU1 332 aaPredicted RBP20.05■□□□□ 0.8
AC007540.1-201ENST00000548473 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
AC007540.1-201ENST00000548473 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.79
AC007540.1-201ENST00000548473 EEA1Q15075 1411 aa19.99■□□□□ 0.79
AC007540.1-201ENST00000548473 CARMIL2Q6F5E8 1435 aa19.99■□□□□ 0.79
AC007540.1-201ENST00000548473 PTPRGP23470 1445 aa19.96■□□□□ 0.79
AC007540.1-201ENST00000548473 TNIKQ9UKE5 1360 aa19.95■□□□□ 0.78
AC007540.1-201ENST00000548473 DISP1Q96F81 1524 aa19.92■□□□□ 0.78
AC007540.1-201ENST00000548473 UGGT2Q9NYU1 1516 aa19.92■□□□□ 0.78
AC007540.1-201ENST00000548473 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
AC007540.1-201ENST00000548473 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
AC007540.1-201ENST00000548473 ADCY10Q96PN6 1610 aa19.86■□□□□ 0.77
AC007540.1-201ENST00000548473 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
AC007540.1-201ENST00000548473 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.77
AC007540.1-201ENST00000548473 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
AC007540.1-201ENST00000548473 UACAQ9BZF9 1416 aa19.8■□□□□ 0.76
AC007540.1-201ENST00000548473 P3H3Q8IVL6 736 aa19.8■□□□□ 0.76
AC007540.1-201ENST00000548473 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
AC007540.1-201ENST00000548473 KIF21BO75037 1637 aa19.76■□□□□ 0.75
AC007540.1-201ENST00000548473 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
AC007540.1-201ENST00000548473 ABCC2Q92887 1545 aa19.75■□□□□ 0.75
AC007540.1-201ENST00000548473 UBTFP17480 764 aaKnown RBP19.74■□□□□ 0.75
AC007540.1-201ENST00000548473 FAM69CQ0P6D2 419 aa19.74■□□□□ 0.75
AC007540.1-201ENST00000548473 MAPKBP1O60336 1514 aa19.73■□□□□ 0.75
AC007540.1-201ENST00000548473 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
AC007540.1-201ENST00000548473 PLB1Q6P1J6 1458 aa19.71■□□□□ 0.75
AC007540.1-201ENST00000548473 KIF13AQ9H1H9 1805 aa19.67■□□□□ 0.74
AC007540.1-201ENST00000548473 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
AC007540.1-201ENST00000548473 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
AC007540.1-201ENST00000548473 SAMD9Q5K651 1589 aa19.66■□□□□ 0.74
AC007540.1-201ENST00000548473 ABCA8O94911 1581 aa19.65■□□□□ 0.74
AC007540.1-201ENST00000548473 DIP2BQ9P265 1576 aa19.64■□□□□ 0.73
AC007540.1-201ENST00000548473 FHOD3Q2V2M9 1422 aa19.62■□□□□ 0.73
AC007540.1-201ENST00000548473 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
AC007540.1-201ENST00000548473 ZCCHC11Q5TAX3 1644 aaKnown RBP19.61■□□□□ 0.73
AC007540.1-201ENST00000548473 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
AC007540.1-201ENST00000548473 EPRSP07814 1512 aaKnown RBP19.53■□□□□ 0.72
AC007540.1-201ENST00000548473 KCNH8Q96L42 1107 aa19.53■□□□□ 0.72
AC007540.1-201ENST00000548473 ATP10BO94823 1461 aa19.53■□□□□ 0.72
AC007540.1-201ENST00000548473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
AC007540.1-201ENST00000548473 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
AC007540.1-201ENST00000548473 WDR7Q9Y4E6 1490 aa19.52■□□□□ 0.72
AC007540.1-201ENST00000548473 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
AC007540.1-201ENST00000548473 GLI2P10070 1586 aa19.51■□□□□ 0.71
AC007540.1-201ENST00000548473 TSPOAP1O95153 1857 aa19.5■□□□□ 0.71
AC007540.1-201ENST00000548473 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
AC007540.1-201ENST00000548473 NUP153P49790 1475 aaKnown RBP19.47■□□□□ 0.71
AC007540.1-201ENST00000548473 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
AC007540.1-201ENST00000548473 FMN1Q68DA7 1419 aa19.42■□□□□ 0.7
AC007540.1-201ENST00000548473 MAP3K4Q9Y6R4 1608 aa19.4■□□□□ 0.7
AC007540.1-201ENST00000548473 PPRC1Q5VV67 1664 aaKnown RBP19.4■□□□□ 0.7
AC007540.1-201ENST00000548473 PLEKHD1A6NEE1 506 aa19.39■□□□□ 0.69
AC007540.1-201ENST00000548473 CD109Q6YHK3 1445 aa19.39■□□□□ 0.69
AC007540.1-201ENST00000548473 KDM6BO15054 1643 aa19.36■□□□□ 0.69
AC007540.1-201ENST00000548473 CLIP1P30622 1438 aa19.35■□□□□ 0.69
AC007540.1-201ENST00000548473 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
AC007540.1-201ENST00000548473 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
AC007540.1-201ENST00000548473 CDK13Q14004 1512 aaKnown RBP19.33■□□□□ 0.68
AC007540.1-201ENST00000548473 CFAP43Q8NDM7 1665 aa19.33■□□□□ 0.68
AC007540.1-201ENST00000548473 MAGI3Q5TCQ9 1506 aa19.31■□□□□ 0.68
AC007540.1-201ENST00000548473 HECW1Q76N89 1606 aa19.3■□□□□ 0.68
AC007540.1-201ENST00000548473 COL17A1Q9UMD9 1497 aaPredicted RBP19.29■□□□□ 0.68
AC007540.1-201ENST00000548473 ABCA9Q8IUA7 1624 aa19.27■□□□□ 0.68
AC007540.1-201ENST00000548473 CDK11AQ9UQ88 783 aaPredicted RBP19.26■□□□□ 0.67
AC007540.1-201ENST00000548473 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
AC007540.1-201ENST00000548473 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
AC007540.1-201ENST00000548473 PCF11O94913 1555 aaKnown RBP19.23■□□□□ 0.67
AC007540.1-201ENST00000548473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.2■□□□□ 0.66
AC007540.1-201ENST00000548473 LRRIQ1Q96JM4 1722 aa19.19■□□□□ 0.66
AC007540.1-201ENST00000548473 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
AC007540.1-201ENST00000548473 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
AC007540.1-201ENST00000548473 PHLDB1Q86UU1 1377 aa19.17■□□□□ 0.66
AC007540.1-201ENST00000548473 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
AC007540.1-201ENST00000548473 TTC37Q6PGP7 1564 aa19.16■□□□□ 0.66
AC007540.1-201ENST00000548473 NEO1Q92859 1461 aa19.16■□□□□ 0.66
AC007540.1-201ENST00000548473 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
AC007540.1-201ENST00000548473 RAPGEF3O95398 923 aa19.14■□□□□ 0.65
AC007540.1-201ENST00000548473 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
AC007540.1-201ENST00000548473 KIF14Q15058 1648 aa19.11■□□□□ 0.65
AC007540.1-201ENST00000548473 FANCAO15360 1455 aa19.11■□□□□ 0.65
AC007540.1-201ENST00000548473 PLCH2O75038 1416 aa19.11■□□□□ 0.65
AC007540.1-201ENST00000548473 AKNAQ7Z591 1439 aa19.11■□□□□ 0.65
AC007540.1-201ENST00000548473 EFCAB2Q5VUJ9 269 aa19.08■□□□□ 0.64
AC007540.1-201ENST00000548473 KDM4FA0A1W2PPD8 638 aa19.06■□□□□ 0.64
AC007540.1-201ENST00000548473 DENND4BO75064 1496 aaPredicted RBP19.05■□□□□ 0.64
AC007540.1-201ENST00000548473 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
AC007540.1-201ENST00000548473 MYO5CQ9NQX4 1742 aa19.03■□□□□ 0.64
AC007540.1-201ENST00000548473 MTUS2Q5JR59 1369 aa19.02■□□□□ 0.64
AC007540.1-201ENST00000548473 SCAPERQ9BY12 1400 aa19.01■□□□□ 0.63
AC007540.1-201ENST00000548473 ARHGAP5Q13017 1502 aa19.01■□□□□ 0.63
AC007540.1-201ENST00000548473 ADGRL1O94910 1474 aa19.01■□□□□ 0.63
AC007540.1-201ENST00000548473 FRMPD1Q5SYB0 1578 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms