RNA–Protein interactions for RNA: ENST00000548098.1

ERGIC2-204, Transcript of ERGIC and golgi 2, humanhuman

TSL 2

Gene ERGIC2, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-204ENST00000548098 POTEMA6NI47 508 aa17.5■□□□□ 0.39
ERGIC2-204ENST00000548098 ATMINO43313 823 aaPredicted RBP17.5■□□□□ 0.39
ERGIC2-204ENST00000548098 C7P10643 843 aa17.5■□□□□ 0.39
ERGIC2-204ENST00000548098 TSPYL2Q9H2G4 693 aaPredicted RBP17.44■□□□□ 0.38
ERGIC2-204ENST00000548098 POTEGQ6S5H5 508 aa17.43■□□□□ 0.38
ERGIC2-204ENST00000548098 MAMSTRQ6ZN01 415 aa17.42■□□□□ 0.38
ERGIC2-204ENST00000548098 PROM2Q8N271 834 aa17.42■□□□□ 0.38
ERGIC2-204ENST00000548098 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
ERGIC2-204ENST00000548098 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
ERGIC2-204ENST00000548098 ATN1P54259 1190 aaPredicted RBP17.31■□□□□ 0.36
ERGIC2-204ENST00000548098 KIF12Q96FN5 646 aa17.31■□□□□ 0.36
ERGIC2-204ENST00000548098 PCDH10Q9P2E7 1040 aa17.31■□□□□ 0.36
ERGIC2-204ENST00000548098 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
ERGIC2-204ENST00000548098 SCUBE2Q9NQ36 999 aa17.29■□□□□ 0.36
ERGIC2-204ENST00000548098 BMP2KQ9NSY1 1161 aaPredicted RBP17.23■□□□□ 0.35
ERGIC2-204ENST00000548098 TIE1P35590 1138 aa17.19■□□□□ 0.34
ERGIC2-204ENST00000548098 MIER1Q8N108 512 aa17.18■□□□□ 0.34
ERGIC2-204ENST00000548098 MAP3K13O43283 966 aa17.17■□□□□ 0.34
ERGIC2-204ENST00000548098 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
ERGIC2-204ENST00000548098 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
ERGIC2-204ENST00000548098 POTEFA5A3E0 1075 aa17.13■□□□□ 0.33
ERGIC2-204ENST00000548098 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
ERGIC2-204ENST00000548098 LCE2DQ5TA82 110 aaPredicted RBP17.12■□□□□ 0.33
ERGIC2-204ENST00000548098 TTLL13PA6NNM8 815 aa17.05■□□□□ 0.32
ERGIC2-204ENST00000548098 SEC24BO95487 1268 aa17.05■□□□□ 0.32
ERGIC2-204ENST00000548098 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
ERGIC2-204ENST00000548098 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
ERGIC2-204ENST00000548098 COLQQ9Y215 455 aaPredicted RBP16.99■□□□□ 0.31
ERGIC2-204ENST00000548098 IER5LQ5T953 404 aa16.98■□□□□ 0.31
ERGIC2-204ENST00000548098 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
ERGIC2-204ENST00000548098 PCDHB13Q9Y5F0 798 aa16.96■□□□□ 0.31
ERGIC2-204ENST00000548098 TRIM35Q9UPQ4 493 aa16.95■□□□□ 0.3
ERGIC2-204ENST00000548098 NUBP1P53384 320 aa16.87■□□□□ 0.29
ERGIC2-204ENST00000548098 IFNL1Q8IU54 200 aa16.83■□□□□ 0.28
ERGIC2-204ENST00000548098 FAM212AQ96EL1 285 aa16.82■□□□□ 0.28
ERGIC2-204ENST00000548098 TMEM106CQ9BVX2 250 aa16.79■□□□□ 0.28
ERGIC2-204ENST00000548098 CDAN1Q8IWY9 1227 aa16.78■□□□□ 0.28
ERGIC2-204ENST00000548098 SLAIN1Q8ND83 568 aa16.78■□□□□ 0.28
ERGIC2-204ENST00000548098 PLCG2P16885 1265 aa16.77■□□□□ 0.28
ERGIC2-204ENST00000548098 ST18O60284 1047 aa16.69■□□□□ 0.26
ERGIC2-204ENST00000548098 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
ERGIC2-204ENST00000548098 OCEL1Q9H607 264 aa16.61■□□□□ 0.25
ERGIC2-204ENST00000548098 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
ERGIC2-204ENST00000548098 TMEM121BQ9BXQ6 578 aaPredicted RBP16.55■□□□□ 0.24
ERGIC2-204ENST00000548098 SNPHO15079 494 aa16.54■□□□□ 0.24
ERGIC2-204ENST00000548098 PYGBP11216 843 aa16.54■□□□□ 0.24
ERGIC2-204ENST00000548098 FKBP8Q14318 412 aa16.54■□□□□ 0.24
ERGIC2-204ENST00000548098 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.53■□□□□ 0.24
ERGIC2-204ENST00000548098 PCDHB8Q9UN66 801 aa16.47■□□□□ 0.23
ERGIC2-204ENST00000548098 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
ERGIC2-204ENST00000548098 MMRN1Q13201 1228 aa16.38■□□□□ 0.21
ERGIC2-204ENST00000548098 SPNS2Q8IVW8 549 aa16.38■□□□□ 0.21
ERGIC2-204ENST00000548098 ZNF467Q7Z7K2 595 aaPredicted RBP16.37■□□□□ 0.21
ERGIC2-204ENST00000548098 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
ERGIC2-204ENST00000548098 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
ERGIC2-204ENST00000548098 MARVELD3Q96A59 401 aa16.35■□□□□ 0.21
ERGIC2-204ENST00000548098 GSE1Q14687 1217 aa16.34■□□□□ 0.21
ERGIC2-204ENST00000548098 PDCD7Q8N8D1 485 aaKnown RBP16.34■□□□□ 0.21
ERGIC2-204ENST00000548098 MKRN3Q13064 507 aaKnown RBP16.33■□□□□ 0.2
ERGIC2-204ENST00000548098 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.2
ERGIC2-204ENST00000548098 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
ERGIC2-204ENST00000548098 EMP3P54852 163 aa16.25■□□□□ 0.19
ERGIC2-204ENST00000548098 CHRM1P11229 460 aaPredicted RBP16.24■□□□□ 0.19
ERGIC2-204ENST00000548098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.23■□□□□ 0.19
ERGIC2-204ENST00000548098 PSEN1P49768 467 aa16.2■□□□□ 0.18
ERGIC2-204ENST00000548098 VASPP50552 380 aaPredicted RBP16.19■□□□□ 0.18
ERGIC2-204ENST00000548098 HS3ST6Q96QI5 342 aa16.13■□□□□ 0.17
ERGIC2-204ENST00000548098 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
ERGIC2-204ENST00000548098 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
ERGIC2-204ENST00000548098 PDAP1Q13442 181 aaKnown RBP16.1■□□□□ 0.17
ERGIC2-204ENST00000548098 KRTAP3-3Q9BYR6 98 aa16.08■□□□□ 0.16
ERGIC2-204ENST00000548098 KRTAP3-2Q9BYR7 98 aa16.08■□□□□ 0.16
ERGIC2-204ENST00000548098 G3V3G9 751 aa16.06■□□□□ 0.16
ERGIC2-204ENST00000548098 POTEB3A0JP26 581 aa16.05■□□□□ 0.16
ERGIC2-204ENST00000548098 POTEBQ6S5H4 581 aa16.05■□□□□ 0.16
ERGIC2-204ENST00000548098 DPY19L2Q6NUT2 758 aa16.01■□□□□ 0.15
ERGIC2-204ENST00000548098 BOLA1Q9Y3E2 137 aa16.01■□□□□ 0.15
ERGIC2-204ENST00000548098 CABP2Q9NPB3 220 aa16■□□□□ 0.15
ERGIC2-204ENST00000548098 HOXB3P14651 431 aaPredicted RBP15.94■□□□□ 0.14
ERGIC2-204ENST00000548098 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
ERGIC2-204ENST00000548098 CIZ1Q9ULV3 898 aaPredicted RBP15.93■□□□□ 0.14
ERGIC2-204ENST00000548098 SPOCK2Q92563 424 aa15.92■□□□□ 0.14
ERGIC2-204ENST00000548098 HOXB1P14653 301 aaPredicted RBP15.9■□□□□ 0.14
ERGIC2-204ENST00000548098 DOK7Q18PE1 504 aa15.89■□□□□ 0.13
ERGIC2-204ENST00000548098 ERBB3P21860 1342 aa15.84■□□□□ 0.13
ERGIC2-204ENST00000548098 RIMBP2O15034 1052 aa15.82■□□□□ 0.12
ERGIC2-204ENST00000548098 IFNLR1Q8IU57 520 aaPredicted RBP15.82■□□□□ 0.12
ERGIC2-204ENST00000548098 EFCAB3Q8N7B9 438 aa15.74■□□□□ 0.11
ERGIC2-204ENST00000548098 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
ERGIC2-204ENST00000548098 RNF166Q96A37 237 aaPredicted RBP15.73■□□□□ 0.11
ERGIC2-204ENST00000548098 VARS2Q5ST30 1063 aaKnown RBP15.71■□□□□ 0.11
ERGIC2-204ENST00000548098 ZSWIM6Q9HCJ5 1215 aa15.71■□□□□ 0.11
ERGIC2-204ENST00000548098 MICALL2Q8IY33 904 aa15.67■□□□□ 0.1
ERGIC2-204ENST00000548098 ZNF687Q8N1G0 1237 aa15.63■□□□□ 0.09
ERGIC2-204ENST00000548098 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
ERGIC2-204ENST00000548098 TMEM92Q6UXU6 159 aa15.62■□□□□ 0.09
ERGIC2-204ENST00000548098 SOX12O15370 315 aa15.6■□□□□ 0.09
ERGIC2-204ENST00000548098 GPR153Q6NV75 609 aa15.58■□□□□ 0.08
ERGIC2-204ENST00000548098 PTGER2P43116 358 aa15.57■□□□□ 0.08
ERGIC2-204ENST00000548098 RIOK3O14730 519 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms