RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 RIMBP3CA6NJZ7 1639 aa18.93■□□□□ 0.62
CALCOCO1-208ENST00000547988 RIMBP3BA6NNM3 1639 aa18.93■□□□□ 0.62
CALCOCO1-208ENST00000547988 RIMBP3Q9UFD9 1639 aa18.93■□□□□ 0.62
CALCOCO1-208ENST00000547988 ARHGEF11O15085 1522 aa18.91■□□□□ 0.62
CALCOCO1-208ENST00000547988 KIAA0586Q9BVV6 1533 aa18.9■□□□□ 0.62
CALCOCO1-208ENST00000547988 IQGAP2Q13576 1575 aa18.89■□□□□ 0.61
CALCOCO1-208ENST00000547988 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
CALCOCO1-208ENST00000547988 ERCC6L2Q5T890 1561 aa18.79■□□□□ 0.6
CALCOCO1-208ENST00000547988 JPH4Q96JJ6 628 aa18.78■□□□□ 0.6
CALCOCO1-208ENST00000547988 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.6
CALCOCO1-208ENST00000547988 GOLGA3Q08378 1498 aa18.77■□□□□ 0.59
CALCOCO1-208ENST00000547988 PRG4Q92954 1404 aaPredicted RBP18.76■□□□□ 0.59
CALCOCO1-208ENST00000547988 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
CALCOCO1-208ENST00000547988 KIAA0556O60303 1618 aa18.71■□□□□ 0.58
CALCOCO1-208ENST00000547988 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
CALCOCO1-208ENST00000547988 DISP1Q96F81 1524 aa18.69■□□□□ 0.58
CALCOCO1-208ENST00000547988 SAMD9Q5K651 1589 aa18.66■□□□□ 0.58
CALCOCO1-208ENST00000547988 CYB5RLQ6IPT4 315 aa18.62■□□□□ 0.57
CALCOCO1-208ENST00000547988 EFCAB5A4FU69 1503 aa18.61■□□□□ 0.57
CALCOCO1-208ENST00000547988 UBTFP17480 764 aaKnown RBP18.61■□□□□ 0.57
CALCOCO1-208ENST00000547988 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
CALCOCO1-208ENST00000547988 EHMT2Q96KQ7 1210 aa18.58■□□□□ 0.56
CALCOCO1-208ENST00000547988 PTPRGP23470 1445 aa18.55■□□□□ 0.56
CALCOCO1-208ENST00000547988 ADCY10Q96PN6 1610 aa18.54■□□□□ 0.56
CALCOCO1-208ENST00000547988 ABCC2Q92887 1545 aa18.48■□□□□ 0.55
CALCOCO1-208ENST00000547988 ABCA8O94911 1581 aa18.47■□□□□ 0.55
CALCOCO1-208ENST00000547988 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
CALCOCO1-208ENST00000547988 ARHGAP35Q9NRY4 1499 aa18.47■□□□□ 0.55
CALCOCO1-208ENST00000547988 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
CALCOCO1-208ENST00000547988 UACAQ9BZF9 1416 aa18.46■□□□□ 0.55
CALCOCO1-208ENST00000547988 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
CALCOCO1-208ENST00000547988 TTBK1Q5TCY1 1321 aaPredicted RBP18.45■□□□□ 0.54
CALCOCO1-208ENST00000547988 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
CALCOCO1-208ENST00000547988 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
CALCOCO1-208ENST00000547988 PLB1Q6P1J6 1458 aa18.42■□□□□ 0.54
CALCOCO1-208ENST00000547988 ZCCHC11Q5TAX3 1644 aaKnown RBP18.41■□□□□ 0.54
CALCOCO1-208ENST00000547988 CLIP1P30622 1438 aa18.4■□□□□ 0.54
CALCOCO1-208ENST00000547988 MAPKBP1O60336 1514 aa18.39■□□□□ 0.53
CALCOCO1-208ENST00000547988 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
CALCOCO1-208ENST00000547988 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
CALCOCO1-208ENST00000547988 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
CALCOCO1-208ENST00000547988 KDM5BQ9UGL1 1544 aa18.38■□□□□ 0.53
CALCOCO1-208ENST00000547988 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
CALCOCO1-208ENST00000547988 KIF13AQ9H1H9 1805 aa18.34■□□□□ 0.53
CALCOCO1-208ENST00000547988 HECW1Q76N89 1606 aa18.34■□□□□ 0.53
CALCOCO1-208ENST00000547988 LRRIQ1Q96JM4 1722 aa18.31■□□□□ 0.52
CALCOCO1-208ENST00000547988 NUP153P49790 1475 aaKnown RBP18.31■□□□□ 0.52
CALCOCO1-208ENST00000547988 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
CALCOCO1-208ENST00000547988 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
CALCOCO1-208ENST00000547988 ATP10BO94823 1461 aa18.26■□□□□ 0.51
CALCOCO1-208ENST00000547988 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
CALCOCO1-208ENST00000547988 FYCO1Q9BQS8 1478 aa18.25■□□□□ 0.51
CALCOCO1-208ENST00000547988 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
CALCOCO1-208ENST00000547988 ABCC10Q5T3U5 1492 aa18.22■□□□□ 0.51
CALCOCO1-208ENST00000547988 WDR7Q9Y4E6 1490 aa18.22■□□□□ 0.51
CALCOCO1-208ENST00000547988 EPRSP07814 1512 aaKnown RBP18.21■□□□□ 0.51
CALCOCO1-208ENST00000547988 GLI2P10070 1586 aa18.2■□□□□ 0.5
CALCOCO1-208ENST00000547988 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
CALCOCO1-208ENST00000547988 CDK13Q14004 1512 aaKnown RBP18.19■□□□□ 0.5
CALCOCO1-208ENST00000547988 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
CALCOCO1-208ENST00000547988 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
CALCOCO1-208ENST00000547988 CFAP43Q8NDM7 1665 aa18.16■□□□□ 0.5
CALCOCO1-208ENST00000547988 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
CALCOCO1-208ENST00000547988 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
CALCOCO1-208ENST00000547988 VPS8Q8N3P4 1428 aa18.15■□□□□ 0.5
CALCOCO1-208ENST00000547988 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO1-208ENST00000547988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
CALCOCO1-208ENST00000547988 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
CALCOCO1-208ENST00000547988 ABCA9Q8IUA7 1624 aa18.12■□□□□ 0.49
CALCOCO1-208ENST00000547988 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
CALCOCO1-208ENST00000547988 FAM69CQ0P6D2 419 aa18.1■□□□□ 0.49
CALCOCO1-208ENST00000547988 PLEKHD1A6NEE1 506 aa18.08■□□□□ 0.48
CALCOCO1-208ENST00000547988 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.48
CALCOCO1-208ENST00000547988 KIF14Q15058 1648 aa18.08■□□□□ 0.48
CALCOCO1-208ENST00000547988 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
CALCOCO1-208ENST00000547988 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
CALCOCO1-208ENST00000547988 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
CALCOCO1-208ENST00000547988 MYO5CQ9NQX4 1742 aa18.04■□□□□ 0.48
CALCOCO1-208ENST00000547988 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
CALCOCO1-208ENST00000547988 TTC37Q6PGP7 1564 aa18.04■□□□□ 0.48
CALCOCO1-208ENST00000547988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.48
CALCOCO1-208ENST00000547988 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
CALCOCO1-208ENST00000547988 EHBP1L1Q8N3D4 1523 aa18.01■□□□□ 0.47
CALCOCO1-208ENST00000547988 TEX14Q8IWB6 1497 aa18■□□□□ 0.47
CALCOCO1-208ENST00000547988 CD109Q6YHK3 1445 aa17.99■□□□□ 0.47
CALCOCO1-208ENST00000547988 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
CALCOCO1-208ENST00000547988 CFAP74Q9C0B2 1584 aa17.97■□□□□ 0.47
CALCOCO1-208ENST00000547988 SUPT6HQ7KZ85 1726 aaKnown RBP17.97■□□□□ 0.47
CALCOCO1-208ENST00000547988 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
CALCOCO1-208ENST00000547988 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
CALCOCO1-208ENST00000547988 PREX2Q70Z35 1606 aa17.95■□□□□ 0.46
CALCOCO1-208ENST00000547988 ARAP3Q8WWN8 1544 aa17.94■□□□□ 0.46
CALCOCO1-208ENST00000547988 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
CALCOCO1-208ENST00000547988 KDM6BO15054 1643 aa17.92■□□□□ 0.46
CALCOCO1-208ENST00000547988 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
CALCOCO1-208ENST00000547988 NEO1Q92859 1461 aa17.89■□□□□ 0.45
CALCOCO1-208ENST00000547988 APLP2Q06481 763 aa17.89■□□□□ 0.45
CALCOCO1-208ENST00000547988 PLCH2O75038 1416 aa17.89■□□□□ 0.45
CALCOCO1-208ENST00000547988 PHLDB1Q86UU1 1377 aa17.87■□□□□ 0.45
CALCOCO1-208ENST00000547988 FANCAO15360 1455 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms