RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 IQGAP2Q13576 1575 aa26.77■■□□□ 1.88
LETMD1-205ENST00000546992 KIAA0586Q9BVV6 1533 aa26.77■■□□□ 1.88
LETMD1-205ENST00000546992 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
LETMD1-205ENST00000546992 SHROOM2Q13796 1616 aa26.74■■□□□ 1.87
LETMD1-205ENST00000546992 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
LETMD1-205ENST00000546992 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
LETMD1-205ENST00000546992 TNIKQ9UKE5 1360 aa26.63■■□□□ 1.85
LETMD1-205ENST00000546992 UGGT2Q9NYU1 1516 aa26.63■■□□□ 1.85
LETMD1-205ENST00000546992 ERCC6L2Q5T890 1561 aa26.62■■□□□ 1.85
LETMD1-205ENST00000546992 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
LETMD1-205ENST00000546992 JPH4Q96JJ6 628 aa26.56■■□□□ 1.84
LETMD1-205ENST00000546992 DISP1Q96F81 1524 aa26.55■■□□□ 1.84
LETMD1-205ENST00000546992 KIAA0556O60303 1618 aa26.54■■□□□ 1.84
LETMD1-205ENST00000546992 PRG4Q92954 1404 aaPredicted RBP26.52■■□□□ 1.84
LETMD1-205ENST00000546992 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 RIMBP3CA6NJZ7 1639 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 RIMBP3BA6NNM3 1639 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 RIMBP3Q9UFD9 1639 aa26.49■■□□□ 1.83
LETMD1-205ENST00000546992 EFCAB5A4FU69 1503 aa26.46■■□□□ 1.83
LETMD1-205ENST00000546992 RANGAP1P46060 587 aaPredicted RBP26.46■■□□□ 1.83
LETMD1-205ENST00000546992 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
LETMD1-205ENST00000546992 CEP162Q5TB80 1403 aa26.46■■□□□ 1.83
LETMD1-205ENST00000546992 CLIP1P30622 1438 aa26.41■■□□□ 1.82
LETMD1-205ENST00000546992 CARMIL2Q6F5E8 1435 aa26.39■■□□□ 1.81
LETMD1-205ENST00000546992 FHOD3Q2V2M9 1422 aa26.38■■□□□ 1.81
LETMD1-205ENST00000546992 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
LETMD1-205ENST00000546992 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
LETMD1-205ENST00000546992 P3H3Q8IVL6 736 aa26.34■■□□□ 1.81
LETMD1-205ENST00000546992 PTPRGP23470 1445 aa26.23■■□□□ 1.79
LETMD1-205ENST00000546992 TTBK1Q5TCY1 1321 aaPredicted RBP26.21■■□□□ 1.79
LETMD1-205ENST00000546992 ABCA8O94911 1581 aa26.2■■□□□ 1.79
LETMD1-205ENST00000546992 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
LETMD1-205ENST00000546992 ADCY10Q96PN6 1610 aa26.17■■□□□ 1.78
LETMD1-205ENST00000546992 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
LETMD1-205ENST00000546992 RAPGEF6Q8TEU7 1601 aa26.17■■□□□ 1.78
LETMD1-205ENST00000546992 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.77
LETMD1-205ENST00000546992 FMN1Q68DA7 1419 aa26.14■■□□□ 1.77
LETMD1-205ENST00000546992 ABCC2Q92887 1545 aa26.11■■□□□ 1.77
LETMD1-205ENST00000546992 UACAQ9BZF9 1416 aa26.11■■□□□ 1.77
LETMD1-205ENST00000546992 CYB5RLQ6IPT4 315 aa26.1■■□□□ 1.77
LETMD1-205ENST00000546992 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
LETMD1-205ENST00000546992 UHRF1BP1LA0JNW5 1464 aa26.08■■□□□ 1.77
LETMD1-205ENST00000546992 NUP153P49790 1475 aaKnown RBP26.06■■□□□ 1.76
LETMD1-205ENST00000546992 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
LETMD1-205ENST00000546992 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
LETMD1-205ENST00000546992 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
LETMD1-205ENST00000546992 ZCCHC11Q5TAX3 1644 aaKnown RBP26.01■■□□□ 1.75
LETMD1-205ENST00000546992 CDK13Q14004 1512 aaKnown RBP25.98■■□□□ 1.75
LETMD1-205ENST00000546992 KDM5BQ9UGL1 1544 aa25.98■■□□□ 1.75
LETMD1-205ENST00000546992 EPRSP07814 1512 aaKnown RBP25.94■■□□□ 1.74
LETMD1-205ENST00000546992 ATP10BO94823 1461 aa25.94■■□□□ 1.74
LETMD1-205ENST00000546992 CFAP43Q8NDM7 1665 aa25.93■■□□□ 1.74
LETMD1-205ENST00000546992 ARID3CA6NKF2 412 aa25.92■■□□□ 1.74
LETMD1-205ENST00000546992 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
LETMD1-205ENST00000546992 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
LETMD1-205ENST00000546992 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
LETMD1-205ENST00000546992 MAGI3Q5TCQ9 1506 aa25.84■■□□□ 1.73
LETMD1-205ENST00000546992 MAPKBP1O60336 1514 aa25.83■■□□□ 1.72
LETMD1-205ENST00000546992 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
LETMD1-205ENST00000546992 ASXL2Q76L83 1435 aa25.77■■□□□ 1.72
LETMD1-205ENST00000546992 WDR7Q9Y4E6 1490 aa25.73■■□□□ 1.71
LETMD1-205ENST00000546992 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
LETMD1-205ENST00000546992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.71■■□□□ 1.71
LETMD1-205ENST00000546992 HNRNPUL2Q1KMD3 747 aaKnown RBP25.71■■□□□ 1.71
LETMD1-205ENST00000546992 KIF14Q15058 1648 aa25.7■■□□□ 1.71
LETMD1-205ENST00000546992 EHBP1L1Q8N3D4 1523 aa25.69■■□□□ 1.7
LETMD1-205ENST00000546992 KIF13AQ9H1H9 1805 aa25.68■■□□□ 1.7
LETMD1-205ENST00000546992 LRRC9Q6ZRR7 1453 aa25.68■■□□□ 1.7
LETMD1-205ENST00000546992 TROQ12816 1431 aaPredicted RBP25.68■■□□□ 1.7
LETMD1-205ENST00000546992 DIP2BQ9P265 1576 aa25.67■■□□□ 1.7
LETMD1-205ENST00000546992 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
LETMD1-205ENST00000546992 PLEKHD1A6NEE1 506 aa25.62■■□□□ 1.69
LETMD1-205ENST00000546992 TTC37Q6PGP7 1564 aa25.61■■□□□ 1.69
LETMD1-205ENST00000546992 MTUS2Q5JR59 1369 aa25.61■■□□□ 1.69
LETMD1-205ENST00000546992 ABCC10Q5T3U5 1492 aa25.6■■□□□ 1.69
LETMD1-205ENST00000546992 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
LETMD1-205ENST00000546992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.59■■□□□ 1.69
LETMD1-205ENST00000546992 CDK11AQ9UQ88 783 aaPredicted RBP25.59■■□□□ 1.69
LETMD1-205ENST00000546992 ABCA9Q8IUA7 1624 aa25.59■■□□□ 1.69
LETMD1-205ENST00000546992 APLP2Q06481 763 aa25.58■■□□□ 1.69
LETMD1-205ENST00000546992 GLI2P10070 1586 aa25.57■■□□□ 1.68
LETMD1-205ENST00000546992 KCNH8Q96L42 1107 aa25.55■■□□□ 1.68
LETMD1-205ENST00000546992 MAP3K4Q9Y6R4 1608 aa25.55■■□□□ 1.68
LETMD1-205ENST00000546992 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
LETMD1-205ENST00000546992 CDC42BPAQ5VT25 1732 aa25.53■■□□□ 1.68
LETMD1-205ENST00000546992 NCOA2Q15596 1464 aa25.53■■□□□ 1.68
LETMD1-205ENST00000546992 MYO5CQ9NQX4 1742 aa25.5■■□□□ 1.67
LETMD1-205ENST00000546992 PPRC1Q5VV67 1664 aaKnown RBP25.49■■□□□ 1.67
LETMD1-205ENST00000546992 CDC42BPBQ9Y5S2 1711 aa25.48■■□□□ 1.67
LETMD1-205ENST00000546992 TSPOAP1O95153 1857 aa25.47■■□□□ 1.67
LETMD1-205ENST00000546992 PREX2Q70Z35 1606 aa25.47■■□□□ 1.67
LETMD1-205ENST00000546992 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
LETMD1-205ENST00000546992 ITSN2Q9NZM3 1697 aa25.43■■□□□ 1.66
LETMD1-205ENST00000546992 PHLDB1Q86UU1 1377 aa25.42■■□□□ 1.66
LETMD1-205ENST00000546992 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
LETMD1-205ENST00000546992 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
LETMD1-205ENST00000546992 ARAP3Q8WWN8 1544 aa25.37■■□□□ 1.65
LETMD1-205ENST00000546992 PLCH2O75038 1416 aa25.36■■□□□ 1.65
LETMD1-205ENST00000546992 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
LETMD1-205ENST00000546992 MYOM3Q5VTT5 1437 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms