RNA–Protein interactions for RNA: ENST00000546884.1

ERBB3-205, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-205ENST00000546884 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
ERBB3-205ENST00000546884 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
ERBB3-205ENST00000546884 SHROOM2Q13796 1616 aa24.66■■□□□ 1.54
ERBB3-205ENST00000546884 KIAA0586Q9BVV6 1533 aa24.66■■□□□ 1.54
ERBB3-205ENST00000546884 ERCC6L2Q5T890 1561 aa24.63■■□□□ 1.53
ERBB3-205ENST00000546884 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
ERBB3-205ENST00000546884 KIF21BO75037 1637 aa24.57■■□□□ 1.52
ERBB3-205ENST00000546884 IQGAP2Q13576 1575 aa24.54■■□□□ 1.52
ERBB3-205ENST00000546884 CTTNBP2Q8WZ74 1663 aa24.53■■□□□ 1.52
ERBB3-205ENST00000546884 PRG4Q92954 1404 aaPredicted RBP24.52■■□□□ 1.52
ERBB3-205ENST00000546884 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
ERBB3-205ENST00000546884 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
ERBB3-205ENST00000546884 UGGT2Q9NYU1 1516 aa24.45■■□□□ 1.5
ERBB3-205ENST00000546884 CYB5RLQ6IPT4 315 aa24.44■■□□□ 1.5
ERBB3-205ENST00000546884 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
ERBB3-205ENST00000546884 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
ERBB3-205ENST00000546884 KIAA0556O60303 1618 aa24.32■■□□□ 1.48
ERBB3-205ENST00000546884 UBTFP17480 764 aaKnown RBP24.32■■□□□ 1.48
ERBB3-205ENST00000546884 CARMIL2Q6F5E8 1435 aa24.31■■□□□ 1.48
ERBB3-205ENST00000546884 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
ERBB3-205ENST00000546884 SAMD9Q5K651 1589 aa24.27■■□□□ 1.48
ERBB3-205ENST00000546884 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
ERBB3-205ENST00000546884 PTPRGP23470 1445 aa24.24■■□□□ 1.47
ERBB3-205ENST00000546884 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
ERBB3-205ENST00000546884 P3H3Q8IVL6 736 aa24.22■■□□□ 1.47
ERBB3-205ENST00000546884 TTBK1Q5TCY1 1321 aaPredicted RBP24.21■■□□□ 1.47
ERBB3-205ENST00000546884 ADCY10Q96PN6 1610 aa24.17■■□□□ 1.46
ERBB3-205ENST00000546884 ARHGAP35Q9NRY4 1499 aa24.13■■□□□ 1.45
ERBB3-205ENST00000546884 FHOD3Q2V2M9 1422 aa24.12■■□□□ 1.45
ERBB3-205ENST00000546884 EFCAB5A4FU69 1503 aa24.12■■□□□ 1.45
ERBB3-205ENST00000546884 PLB1Q6P1J6 1458 aa24.1■■□□□ 1.45
ERBB3-205ENST00000546884 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
ERBB3-205ENST00000546884 UHRF1BP1LA0JNW5 1464 aa24.07■■□□□ 1.44
ERBB3-205ENST00000546884 ABCA8O94911 1581 aa24.07■■□□□ 1.44
ERBB3-205ENST00000546884 ABCC2Q92887 1545 aa24.05■■□□□ 1.44
ERBB3-205ENST00000546884 CLIP1P30622 1438 aa23.99■■□□□ 1.43
ERBB3-205ENST00000546884 KDM5BQ9UGL1 1544 aa23.98■■□□□ 1.43
ERBB3-205ENST00000546884 RAPGEF6Q8TEU7 1601 aa23.95■■□□□ 1.43
ERBB3-205ENST00000546884 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
ERBB3-205ENST00000546884 ZCCHC11Q5TAX3 1644 aaKnown RBP23.93■■□□□ 1.42
ERBB3-205ENST00000546884 NPM1P06748 294 aaKnown RBP eCLIP23.92■■□□□ 1.42
ERBB3-205ENST00000546884 MAPKBP1O60336 1514 aa23.92■■□□□ 1.42
ERBB3-205ENST00000546884 NUP153P49790 1475 aaKnown RBP23.9■■□□□ 1.42
ERBB3-205ENST00000546884 ATP10BO94823 1461 aa23.89■■□□□ 1.42
ERBB3-205ENST00000546884 FMN1Q68DA7 1419 aa23.88■■□□□ 1.41
ERBB3-205ENST00000546884 ARID3CA6NKF2 412 aa23.87■■□□□ 1.41
ERBB3-205ENST00000546884 ASXL2Q76L83 1435 aa23.84■■□□□ 1.41
ERBB3-205ENST00000546884 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
ERBB3-205ENST00000546884 LRRIQ1Q96JM4 1722 aa23.81■■□□□ 1.4
ERBB3-205ENST00000546884 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
ERBB3-205ENST00000546884 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
ERBB3-205ENST00000546884 ABCC10Q5T3U5 1492 aa23.79■■□□□ 1.4
ERBB3-205ENST00000546884 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
ERBB3-205ENST00000546884 DIP2BQ9P265 1576 aa23.77■■□□□ 1.4
ERBB3-205ENST00000546884 EPRSP07814 1512 aaKnown RBP23.75■■□□□ 1.39
ERBB3-205ENST00000546884 CDK13Q14004 1512 aaKnown RBP23.75■■□□□ 1.39
ERBB3-205ENST00000546884 HECW1Q76N89 1606 aa23.75■■□□□ 1.39
ERBB3-205ENST00000546884 ATP1B4Q9UN42 357 aaPredicted RBP23.73■■□□□ 1.39
ERBB3-205ENST00000546884 WDR7Q9Y4E6 1490 aa23.73■■□□□ 1.39
ERBB3-205ENST00000546884 FAM69CQ0P6D2 419 aa23.72■■□□□ 1.39
ERBB3-205ENST00000546884 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
ERBB3-205ENST00000546884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
ERBB3-205ENST00000546884 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
ERBB3-205ENST00000546884 GLI2P10070 1586 aa23.68■■□□□ 1.38
ERBB3-205ENST00000546884 KCNH8Q96L42 1107 aa23.66■■□□□ 1.38
ERBB3-205ENST00000546884 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
ERBB3-205ENST00000546884 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
ERBB3-205ENST00000546884 MAGI3Q5TCQ9 1506 aa23.6■■□□□ 1.37
ERBB3-205ENST00000546884 MAP3K4Q9Y6R4 1608 aa23.6■■□□□ 1.37
ERBB3-205ENST00000546884 CCDC18Q5T9S5 1454 aa23.6■■□□□ 1.37
ERBB3-205ENST00000546884 PPRC1Q5VV67 1664 aaKnown RBP23.58■■□□□ 1.37
ERBB3-205ENST00000546884 TSPOAP1O95153 1857 aa23.58■■□□□ 1.36
ERBB3-205ENST00000546884 ABCA9Q8IUA7 1624 aa23.54■■□□□ 1.36
ERBB3-205ENST00000546884 TROQ12816 1431 aaPredicted RBP23.52■■□□□ 1.36
ERBB3-205ENST00000546884 CFAP43Q8NDM7 1665 aa23.52■■□□□ 1.36
ERBB3-205ENST00000546884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.52■■□□□ 1.36
ERBB3-205ENST00000546884 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
ERBB3-205ENST00000546884 KIF14Q15058 1648 aa23.51■■□□□ 1.35
ERBB3-205ENST00000546884 CD109Q6YHK3 1445 aa23.5■■□□□ 1.35
ERBB3-205ENST00000546884 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
ERBB3-205ENST00000546884 TIAM1Q13009 1591 aa23.46■■□□□ 1.35
ERBB3-205ENST00000546884 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
ERBB3-205ENST00000546884 KANK4Q5T7N3 995 aaPredicted RBP23.41■■□□□ 1.34
ERBB3-205ENST00000546884 MTUS2Q5JR59 1369 aa23.38■■□□□ 1.33
ERBB3-205ENST00000546884 COL17A1Q9UMD9 1497 aaPredicted RBP23.37■■□□□ 1.33
ERBB3-205ENST00000546884 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
ERBB3-205ENST00000546884 PLCH2O75038 1416 aa23.36■■□□□ 1.33
ERBB3-205ENST00000546884 EHBP1L1Q8N3D4 1523 aa23.36■■□□□ 1.33
ERBB3-205ENST00000546884 TEX14Q8IWB6 1497 aa23.36■■□□□ 1.33
ERBB3-205ENST00000546884 MYO5CQ9NQX4 1742 aa23.33■■□□□ 1.32
ERBB3-205ENST00000546884 CDC42BPBQ9Y5S2 1711 aa23.33■■□□□ 1.32
ERBB3-205ENST00000546884 CDC42BPAQ5VT25 1732 aa23.32■■□□□ 1.32
ERBB3-205ENST00000546884 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
ERBB3-205ENST00000546884 NEO1Q92859 1461 aa23.29■■□□□ 1.32
ERBB3-205ENST00000546884 ARAP3Q8WWN8 1544 aa23.28■■□□□ 1.32
ERBB3-205ENST00000546884 KDM6BO15054 1643 aa23.28■■□□□ 1.32
ERBB3-205ENST00000546884 FANCAO15360 1455 aa23.28■■□□□ 1.32
ERBB3-205ENST00000546884 PREX2Q70Z35 1606 aa23.27■■□□□ 1.32
ERBB3-205ENST00000546884 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
ERBB3-205ENST00000546884 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms