RNA–Protein interactions for RNA: ENST00000546722.1

CRY1-202, Transcript of cryptochrome circadian regulator 1, humanhuman

TSL 3

Gene CRY1, Length 471 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRY1-202ENST00000546722 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
CRY1-202ENST00000546722 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
CRY1-202ENST00000546722 ATMINO43313 823 aaPredicted RBP13.04□□□□□ -0.32
CRY1-202ENST00000546722 SCUBE2Q9NQ36 999 aa13.04□□□□□ -0.32
CRY1-202ENST00000546722 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
CRY1-202ENST00000546722 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
CRY1-202ENST00000546722 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
CRY1-202ENST00000546722 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
CRY1-202ENST00000546722 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
CRY1-202ENST00000546722 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
CRY1-202ENST00000546722 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
CRY1-202ENST00000546722 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
CRY1-202ENST00000546722 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
CRY1-202ENST00000546722 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
CRY1-202ENST00000546722 SEC24BO95487 1268 aa12.7□□□□□ -0.38
CRY1-202ENST00000546722 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
CRY1-202ENST00000546722 CCDC61Q9Y6R9 512 aa12.69□□□□□ -0.38
CRY1-202ENST00000546722 MMRN1Q13201 1228 aa12.67□□□□□ -0.38
CRY1-202ENST00000546722 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
CRY1-202ENST00000546722 ST18O60284 1047 aa12.66□□□□□ -0.38
CRY1-202ENST00000546722 TIE1P35590 1138 aa12.62□□□□□ -0.39
CRY1-202ENST00000546722 SPNS2Q8IVW8 549 aa12.61□□□□□ -0.39
CRY1-202ENST00000546722 SLAIN1Q8ND83 568 aa12.61□□□□□ -0.39
CRY1-202ENST00000546722 MAP3K13O43283 966 aa12.59□□□□□ -0.39
CRY1-202ENST00000546722 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
CRY1-202ENST00000546722 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
CRY1-202ENST00000546722 IER5LQ5T953 404 aa12.47□□□□□ -0.41
CRY1-202ENST00000546722 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
CRY1-202ENST00000546722 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
CRY1-202ENST00000546722 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
CRY1-202ENST00000546722 PLCG2P16885 1265 aa12.37□□□□□ -0.43
CRY1-202ENST00000546722 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
CRY1-202ENST00000546722 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
CRY1-202ENST00000546722 SNPHO15079 494 aa12.32□□□□□ -0.44
CRY1-202ENST00000546722 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
CRY1-202ENST00000546722 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
CRY1-202ENST00000546722 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
CRY1-202ENST00000546722 MIER1Q8N108 512 aa12.27□□□□□ -0.45
CRY1-202ENST00000546722 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
CRY1-202ENST00000546722 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
CRY1-202ENST00000546722 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
CRY1-202ENST00000546722 EMP3P54852 163 aa12.22□□□□□ -0.45
CRY1-202ENST00000546722 KRTAP3-3Q9BYR6 98 aa12.21□□□□□ -0.45
CRY1-202ENST00000546722 KRTAP3-2Q9BYR7 98 aa12.21□□□□□ -0.45
CRY1-202ENST00000546722 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
CRY1-202ENST00000546722 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
CRY1-202ENST00000546722 PROM2Q8N271 834 aa12.19□□□□□ -0.46
CRY1-202ENST00000546722 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
CRY1-202ENST00000546722 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
CRY1-202ENST00000546722 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
CRY1-202ENST00000546722 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
CRY1-202ENST00000546722 NUBP1P53384 320 aa12.06□□□□□ -0.48
CRY1-202ENST00000546722 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
CRY1-202ENST00000546722 FAM212AQ96EL1 285 aa12.01□□□□□ -0.49
CRY1-202ENST00000546722 ZBTB47Q9UFB7 747 aaPredicted RBP11.97□□□□□ -0.49
CRY1-202ENST00000546722 RNF166Q96A37 237 aaPredicted RBP11.96□□□□□ -0.49
CRY1-202ENST00000546722 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
CRY1-202ENST00000546722 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
CRY1-202ENST00000546722 PCDHB8Q9UN66 801 aa11.92□□□□□ -0.5
CRY1-202ENST00000546722 PYGBP11216 843 aa11.91□□□□□ -0.5
CRY1-202ENST00000546722 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
CRY1-202ENST00000546722 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
CRY1-202ENST00000546722 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
CRY1-202ENST00000546722 MYT1LQ9UL68 1186 aa11.84□□□□□ -0.51
CRY1-202ENST00000546722 ERBB3P21860 1342 aa11.83□□□□□ -0.52
CRY1-202ENST00000546722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.527e-7■■■□□ 18.6
CRY1-202ENST00000546722 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
CRY1-202ENST00000546722 HOXB3P14651 431 aaPredicted RBP11.79□□□□□ -0.52
CRY1-202ENST00000546722 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
CRY1-202ENST00000546722 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
CRY1-202ENST00000546722 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
CRY1-202ENST00000546722 VARS2Q5ST30 1063 aaKnown RBP11.72□□□□□ -0.53
CRY1-202ENST00000546722 G3V3G9 751 aa11.7□□□□□ -0.54
CRY1-202ENST00000546722 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
CRY1-202ENST00000546722 ZNF467Q7Z7K2 595 aaPredicted RBP11.67□□□□□ -0.54
CRY1-202ENST00000546722 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
CRY1-202ENST00000546722 RIMBP2O15034 1052 aa11.61□□□□□ -0.55
CRY1-202ENST00000546722 PSEN1P49768 467 aa11.61□□□□□ -0.55
CRY1-202ENST00000546722 ILDR1Q86SU0 546 aaPredicted RBP11.61□□□□□ -0.55
CRY1-202ENST00000546722 PTGER2P43116 358 aa11.6□□□□□ -0.55
CRY1-202ENST00000546722 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
CRY1-202ENST00000546722 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
CRY1-202ENST00000546722 CABP2Q9NPB3 220 aa11.51□□□□□ -0.57
CRY1-202ENST00000546722 PLA2G2EQ9NZK7 142 aa11.51□□□□□ -0.57
CRY1-202ENST00000546722 GSE1Q14687 1217 aa11.5□□□□□ -0.57
CRY1-202ENST00000546722 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
CRY1-202ENST00000546722 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
CRY1-202ENST00000546722 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
CRY1-202ENST00000546722 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
CRY1-202ENST00000546722 TMEM92Q6UXU6 159 aa11.41□□□□□ -0.58
CRY1-202ENST00000546722 LSM11P83369 360 aaKnown RBP eCLIP11.39□□□□□ -0.59
CRY1-202ENST00000546722 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
CRY1-202ENST00000546722 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
CRY1-202ENST00000546722 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
CRY1-202ENST00000546722 KHSRPQ92945 711 aaKnown RBP eCLIP11.33□□□□□ -0.6
CRY1-202ENST00000546722 ZNF316A6NFI3 1004 aaPredicted RBP11.32□□□□□ -0.6
CRY1-202ENST00000546722 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
CRY1-202ENST00000546722 FKBP8Q14318 412 aa11.26□□□□□ -0.61
CRY1-202ENST00000546722 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
CRY1-202ENST00000546722 POTEEQ6S8J3 1075 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms