RNA–Protein interactions for RNA: ENST00000546509.5

ERGIC2-202, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 308 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-202ENST00000546509 KLHL34Q8N239 644 aa19.18■□□□□ 0.66
ERGIC2-202ENST00000546509 GALR2O43603 387 aaPredicted RBP19.15■□□□□ 0.66
ERGIC2-202ENST00000546509 FAM212AQ96EL1 285 aa19.12■□□□□ 0.65
ERGIC2-202ENST00000546509 DCBLD2Q96PD2 775 aa19.12■□□□□ 0.65
ERGIC2-202ENST00000546509 KIF12Q96FN5 646 aa19.06■□□□□ 0.64
ERGIC2-202ENST00000546509 POTEIP0CG38 1075 aa19.04■□□□□ 0.64
ERGIC2-202ENST00000546509 MS4A3Q96HJ5 214 aa19.04■□□□□ 0.64
ERGIC2-202ENST00000546509 DCAF8Q5TAQ9 597 aa19.01■□□□□ 0.63
ERGIC2-202ENST00000546509 IFNLR1Q8IU57 520 aaPredicted RBP19.01■□□□□ 0.63
ERGIC2-202ENST00000546509 MAP3K13O43283 966 aa18.96■□□□□ 0.63
ERGIC2-202ENST00000546509 SPOCK2Q92563 424 aa18.93■□□□□ 0.62
ERGIC2-202ENST00000546509 GSE1Q14687 1217 aa18.9■□□□□ 0.62
ERGIC2-202ENST00000546509 SGIP1Q9BQI5 828 aa18.89■□□□□ 0.61
ERGIC2-202ENST00000546509 PCDHB13Q9Y5F0 798 aa18.86■□□□□ 0.61
ERGIC2-202ENST00000546509 ASTLQ6HA08 431 aaPredicted RBP18.82■□□□□ 0.6
ERGIC2-202ENST00000546509 PYGBP11216 843 aa18.81■□□□□ 0.6
ERGIC2-202ENST00000546509 ATMINO43313 823 aaPredicted RBP18.79■□□□□ 0.6
ERGIC2-202ENST00000546509 TIE1P35590 1138 aa18.75■□□□□ 0.59
ERGIC2-202ENST00000546509 TRPC6Q9Y210 931 aa18.75■□□□□ 0.59
ERGIC2-202ENST00000546509 IFNL1Q8IU54 200 aa18.74■□□□□ 0.59
ERGIC2-202ENST00000546509 LHX8Q68G74 356 aa18.73■□□□□ 0.59
ERGIC2-202ENST00000546509 CIZ1Q9ULV3 898 aaPredicted RBP18.73■□□□□ 0.59
ERGIC2-202ENST00000546509 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
ERGIC2-202ENST00000546509 BMP2KQ9NSY1 1161 aaPredicted RBP18.72■□□□□ 0.59
ERGIC2-202ENST00000546509 CHRM1P11229 460 aaPredicted RBP18.68■□□□□ 0.58
ERGIC2-202ENST00000546509 ATN1P54259 1190 aaPredicted RBP18.68■□□□□ 0.58
ERGIC2-202ENST00000546509 SLC39A7Q92504 469 aa18.66■□□□□ 0.58
ERGIC2-202ENST00000546509 TTLL13PA6NNM8 815 aa18.64■□□□□ 0.57
ERGIC2-202ENST00000546509 C7P10643 843 aa18.63■□□□□ 0.57
ERGIC2-202ENST00000546509 ZNF467Q7Z7K2 595 aaPredicted RBP18.6■□□□□ 0.57
ERGIC2-202ENST00000546509 METRNQ9UJH8 293 aa18.6■□□□□ 0.57
ERGIC2-202ENST00000546509 PCDHB8Q9UN66 801 aa18.6■□□□□ 0.57
ERGIC2-202ENST00000546509 TMEM106CQ9BVX2 250 aa18.58■□□□□ 0.56
ERGIC2-202ENST00000546509 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
ERGIC2-202ENST00000546509 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
ERGIC2-202ENST00000546509 IER5LQ5T953 404 aa18.45■□□□□ 0.54
ERGIC2-202ENST00000546509 POTEB2H3BUK9 544 aa18.42■□□□□ 0.54
ERGIC2-202ENST00000546509 SEC24BO95487 1268 aa18.4■□□□□ 0.54
ERGIC2-202ENST00000546509 PSEN1P49768 467 aa18.39■□□□□ 0.53
ERGIC2-202ENST00000546509 PDAP1Q13442 181 aaKnown RBP18.38■□□□□ 0.53
ERGIC2-202ENST00000546509 POTEFA5A3E0 1075 aa18.34■□□□□ 0.53
ERGIC2-202ENST00000546509 COLQQ9Y215 455 aaPredicted RBP18.32■□□□□ 0.52
ERGIC2-202ENST00000546509 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
ERGIC2-202ENST00000546509 OTUD5Q96G74 571 aa18.28■□□□□ 0.52
ERGIC2-202ENST00000546509 MAMSTRQ6ZN01 415 aa18.27■□□□□ 0.52
ERGIC2-202ENST00000546509 PLCG2P16885 1265 aa18.26■□□□□ 0.51
ERGIC2-202ENST00000546509 POTEJP0CG39 1038 aa18.25■□□□□ 0.51
ERGIC2-202ENST00000546509 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
ERGIC2-202ENST00000546509 IRX5P78411 483 aaPredicted RBP18.24■□□□□ 0.51
ERGIC2-202ENST00000546509 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
ERGIC2-202ENST00000546509 OCEL1Q9H607 264 aa18.22■□□□□ 0.51
ERGIC2-202ENST00000546509 RNF25Q96BH1 459 aaPredicted RBP18.2■□□□□ 0.5
ERGIC2-202ENST00000546509 SCUBE2Q9NQ36 999 aa18.18■□□□□ 0.5
ERGIC2-202ENST00000546509 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
ERGIC2-202ENST00000546509 CABP2Q9NPB3 220 aa18.16■□□□□ 0.5
ERGIC2-202ENST00000546509 VGFO15240 615 aaPredicted RBP18.14■□□□□ 0.49
ERGIC2-202ENST00000546509 PKD2Q13563 968 aa18.14■□□□□ 0.49
ERGIC2-202ENST00000546509 TAOK2Q9UL54 1235 aa18.12■□□□□ 0.49
ERGIC2-202ENST00000546509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.09■□□□□ 0.49
ERGIC2-202ENST00000546509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
ERGIC2-202ENST00000546509 ZFP91Q96JP5 570 aaPredicted RBP18.07■□□□□ 0.48
ERGIC2-202ENST00000546509 PDCD7Q8N8D1 485 aaKnown RBP18.05■□□□□ 0.48
ERGIC2-202ENST00000546509 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
ERGIC2-202ENST00000546509 EFCAB3Q8N7B9 438 aa17.99■□□□□ 0.47
ERGIC2-202ENST00000546509 RGL2O15211 777 aa17.98■□□□□ 0.47
ERGIC2-202ENST00000546509 L3MBTL3Q96JM7 780 aaPredicted RBP17.97■□□□□ 0.47
ERGIC2-202ENST00000546509 BCL11BQ9C0K0 894 aaPredicted RBP17.91■□□□□ 0.46
ERGIC2-202ENST00000546509 SOX12O15370 315 aa17.9■□□□□ 0.46
ERGIC2-202ENST00000546509 SLAIN1Q8ND83 568 aa17.89■□□□□ 0.45
ERGIC2-202ENST00000546509 STK24Q9Y6E0 443 aa17.89■□□□□ 0.45
ERGIC2-202ENST00000546509 STK25O00506 426 aa17.88■□□□□ 0.45
ERGIC2-202ENST00000546509 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.88■□□□□ 0.45
ERGIC2-202ENST00000546509 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
ERGIC2-202ENST00000546509 G3V3G9 751 aa17.84■□□□□ 0.45
ERGIC2-202ENST00000546509 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
ERGIC2-202ENST00000546509 BOLA1Q9Y3E2 137 aa17.81■□□□□ 0.44
ERGIC2-202ENST00000546509 PHF8Q9UPP1 1060 aa17.77■□□□□ 0.44
ERGIC2-202ENST00000546509 NLRP6P59044 892 aa17.74■□□□□ 0.43
ERGIC2-202ENST00000546509 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
ERGIC2-202ENST00000546509 MS4A4AQ96JQ5 239 aa17.71■□□□□ 0.43
ERGIC2-202ENST00000546509 TMEM121BQ9BXQ6 578 aaPredicted RBP17.68■□□□□ 0.42
ERGIC2-202ENST00000546509 FBXO22Q8NEZ5 403 aa17.66■□□□□ 0.42
ERGIC2-202ENST00000546509 MFRPQ9BY79 579 aa17.66■□□□□ 0.42
ERGIC2-202ENST00000546509 HS6ST3Q8IZP7 471 aa17.64■□□□□ 0.41
ERGIC2-202ENST00000546509 SNPHO15079 494 aa17.63■□□□□ 0.41
ERGIC2-202ENST00000546509 MICALL2Q8IY33 904 aa17.62■□□□□ 0.41
ERGIC2-202ENST00000546509 CHGAP10645 457 aaKnown RBP17.6■□□□□ 0.41
ERGIC2-202ENST00000546509 LCE2DQ5TA82 110 aaPredicted RBP17.59■□□□□ 0.41
ERGIC2-202ENST00000546509 POTEMA6NI47 508 aa17.58■□□□□ 0.4
ERGIC2-202ENST00000546509 POTEGQ6S5H5 508 aa17.56■□□□□ 0.4
ERGIC2-202ENST00000546509 ST18O60284 1047 aa17.51■□□□□ 0.39
ERGIC2-202ENST00000546509 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
ERGIC2-202ENST00000546509 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
ERGIC2-202ENST00000546509 TMEM92Q6UXU6 159 aa17.42■□□□□ 0.38
ERGIC2-202ENST00000546509 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
ERGIC2-202ENST00000546509 PPP1R37O75864 691 aa17.36■□□□□ 0.37
ERGIC2-202ENST00000546509 RYDENQ9NUL5 291 aaKnown RBP17.35■□□□□ 0.37
ERGIC2-202ENST00000546509 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
ERGIC2-202ENST00000546509 HOXB3P14651 431 aaPredicted RBP17.34■□□□□ 0.37
ERGIC2-202ENST00000546509 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms