RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RIMBP3CA6NJZ7 1639 aa33.98■■■■□ 3.03
HMGA2-211ENST00000545998 RIMBP3BA6NNM3 1639 aa33.98■■■■□ 3.03
HMGA2-211ENST00000545998 RIMBP3Q9UFD9 1639 aa33.98■■■■□ 3.03
HMGA2-211ENST00000545998 SHROOM2Q13796 1616 aa33.98■■■■□ 3.03
HMGA2-211ENST00000545998 KIF21BO75037 1637 aa33.92■■■■□ 3.02
HMGA2-211ENST00000545998 JPH4Q96JJ6 628 aa33.88■■■■□ 3.01
HMGA2-211ENST00000545998 IQGAP2Q13576 1575 aa33.87■■■■□ 3.01
HMGA2-211ENST00000545998 CTTNBP2Q8WZ74 1663 aa33.87■■■■□ 3.01
HMGA2-211ENST00000545998 ERCC6L2Q5T890 1561 aa33.82■■■■□ 3
HMGA2-211ENST00000545998 PRG4Q92954 1404 aaPredicted RBP33.8■■■■□ 3
HMGA2-211ENST00000545998 ARAP1Q96P48 1450 aa33.75■■■□□ 2.99
HMGA2-211ENST00000545998 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
HMGA2-211ENST00000545998 UGGT2Q9NYU1 1516 aa33.7■■■□□ 2.99
HMGA2-211ENST00000545998 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
HMGA2-211ENST00000545998 EHMT2Q96KQ7 1210 aa33.63■■■□□ 2.97
HMGA2-211ENST00000545998 DISP1Q96F81 1524 aa33.61■■■□□ 2.97
HMGA2-211ENST00000545998 CARMIL2Q6F5E8 1435 aa33.6■■■□□ 2.97
HMGA2-211ENST00000545998 UBTFP17480 764 aaKnown RBP33.55■■■□□ 2.96
HMGA2-211ENST00000545998 KIAA0556O60303 1618 aa33.54■■■□□ 2.96
HMGA2-211ENST00000545998 TNIKQ9UKE5 1360 aa33.48■■■□□ 2.95
HMGA2-211ENST00000545998 SAMD9Q5K651 1589 aa33.45■■■□□ 2.95
HMGA2-211ENST00000545998 PTPRGP23470 1445 aa33.42■■■□□ 2.94
HMGA2-211ENST00000545998 RANGAP1P46060 587 aaPredicted RBP33.38■■■□□ 2.93
HMGA2-211ENST00000545998 TTBK1Q5TCY1 1321 aaPredicted RBP33.34■■■□□ 2.93
HMGA2-211ENST00000545998 EFCAB5A4FU69 1503 aa33.33■■■□□ 2.93
HMGA2-211ENST00000545998 P3H3Q8IVL6 736 aa33.31■■■□□ 2.92
HMGA2-211ENST00000545998 ADCY10Q96PN6 1610 aa33.28■■■□□ 2.92
HMGA2-211ENST00000545998 LOC105371045A0A1W2PR82 267 aa33.25■■■□□ 2.91
HMGA2-211ENST00000545998 ARHGAP35Q9NRY4 1499 aa33.22■■■□□ 2.91
HMGA2-211ENST00000545998 FHOD3Q2V2M9 1422 aa33.22■■■□□ 2.91
HMGA2-211ENST00000545998 UACAQ9BZF9 1416 aa33.22■■■□□ 2.91
HMGA2-211ENST00000545998 UHRF1BP1LA0JNW5 1464 aa33.19■■■□□ 2.9
HMGA2-211ENST00000545998 ABCC2Q92887 1545 aa33.17■■■□□ 2.9
HMGA2-211ENST00000545998 PLB1Q6P1J6 1458 aa33.17■■■□□ 2.9
HMGA2-211ENST00000545998 ABCA8O94911 1581 aa33.16■■■□□ 2.9
HMGA2-211ENST00000545998 CLIP1P30622 1438 aa33.11■■■□□ 2.89
HMGA2-211ENST00000545998 NPM1P06748 294 aaKnown RBP eCLIP33.05■■■□□ 2.88
HMGA2-211ENST00000545998 CEP162Q5TB80 1403 aa33.05■■■□□ 2.88
HMGA2-211ENST00000545998 RAPGEF6Q8TEU7 1601 aa33.05■■■□□ 2.88
HMGA2-211ENST00000545998 KDM5BQ9UGL1 1544 aa33.03■■■□□ 2.88
HMGA2-211ENST00000545998 FMN1Q68DA7 1419 aa33■■■□□ 2.87
HMGA2-211ENST00000545998 MAPKBP1O60336 1514 aa32.99■■■□□ 2.87
HMGA2-211ENST00000545998 ZCCHC11Q5TAX3 1644 aaKnown RBP32.98■■■□□ 2.87
HMGA2-211ENST00000545998 NUP153P49790 1475 aaKnown RBP32.92■■■□□ 2.86
HMGA2-211ENST00000545998 ATP10BO94823 1461 aa32.87■■■□□ 2.85
HMGA2-211ENST00000545998 ASXL2Q76L83 1435 aa32.85■■■□□ 2.85
HMGA2-211ENST00000545998 ARID3CA6NKF2 412 aa32.83■■■□□ 2.85
HMGA2-211ENST00000545998 HECW1Q76N89 1606 aa32.83■■■□□ 2.85
HMGA2-211ENST00000545998 PCF11O94913 1555 aaKnown RBP32.81■■■□□ 2.84
HMGA2-211ENST00000545998 TRHP20396 242 aaPredicted RBP32.81■■■□□ 2.84
HMGA2-211ENST00000545998 CASKIN1Q8WXD9 1431 aa32.8■■■□□ 2.84
HMGA2-211ENST00000545998 ABCC10Q5T3U5 1492 aa32.78■■■□□ 2.84
HMGA2-211ENST00000545998 KIF13AQ9H1H9 1805 aa32.77■■■□□ 2.84
HMGA2-211ENST00000545998 DIP2BQ9P265 1576 aa32.76■■■□□ 2.83
HMGA2-211ENST00000545998 FYCO1Q9BQS8 1478 aa32.74■■■□□ 2.83
HMGA2-211ENST00000545998 WDR7Q9Y4E6 1490 aa32.74■■■□□ 2.83
HMGA2-211ENST00000545998 EPRSP07814 1512 aaKnown RBP32.74■■■□□ 2.83
HMGA2-211ENST00000545998 ATP1B4Q9UN42 357 aaPredicted RBP32.74■■■□□ 2.83
HMGA2-211ENST00000545998 LRRIQ1Q96JM4 1722 aa32.74■■■□□ 2.83
HMGA2-211ENST00000545998 CDK13Q14004 1512 aaKnown RBP32.72■■■□□ 2.83
HMGA2-211ENST00000545998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.7■■■□□ 2.82
HMGA2-211ENST00000545998 HNRNPUL2Q1KMD3 747 aaKnown RBP32.7■■■□□ 2.82
HMGA2-211ENST00000545998 FAM69CQ0P6D2 419 aa32.67■■■□□ 2.82
HMGA2-211ENST00000545998 GLI2P10070 1586 aa32.64■■■□□ 2.82
HMGA2-211ENST00000545998 VPS8Q8N3P4 1428 aa32.63■■■□□ 2.81
HMGA2-211ENST00000545998 CCDC18Q5T9S5 1454 aa32.62■■■□□ 2.81
HMGA2-211ENST00000545998 PLEKHD1A6NEE1 506 aa32.58■■■□□ 2.81
HMGA2-211ENST00000545998 KCNH8Q96L42 1107 aa32.58■■■□□ 2.81
HMGA2-211ENST00000545998 CDK11AQ9UQ88 783 aaPredicted RBP32.52■■■□□ 2.8
HMGA2-211ENST00000545998 MAP3K4Q9Y6R4 1608 aa32.51■■■□□ 2.8
HMGA2-211ENST00000545998 TSPOAP1O95153 1857 aa32.49■■■□□ 2.79
HMGA2-211ENST00000545998 CFAP43Q8NDM7 1665 aa32.47■■■□□ 2.79
HMGA2-211ENST00000545998 ABCA9Q8IUA7 1624 aa32.46■■■□□ 2.79
HMGA2-211ENST00000545998 TROQ12816 1431 aaPredicted RBP32.46■■■□□ 2.79
HMGA2-211ENST00000545998 MAGI3Q5TCQ9 1506 aa32.45■■■□□ 2.78
HMGA2-211ENST00000545998 PPRC1Q5VV67 1664 aaKnown RBP32.43■■■□□ 2.78
HMGA2-211ENST00000545998 CD109Q6YHK3 1445 aa32.4■■■□□ 2.78
HMGA2-211ENST00000545998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.39■■■□□ 2.78
HMGA2-211ENST00000545998 KIF14Q15058 1648 aa32.37■■■□□ 2.77
HMGA2-211ENST00000545998 TIAM1Q13009 1591 aa32.37■■■□□ 2.77
HMGA2-211ENST00000545998 TTC37Q6PGP7 1564 aa32.35■■■□□ 2.77
HMGA2-211ENST00000545998 MAP3K1Q13233 1512 aa32.32■■■□□ 2.77
HMGA2-211ENST00000545998 MTUS2Q5JR59 1369 aa32.3■■■□□ 2.76
HMGA2-211ENST00000545998 TEX14Q8IWB6 1497 aa32.29■■■□□ 2.76
HMGA2-211ENST00000545998 EHBP1L1Q8N3D4 1523 aa32.28■■■□□ 2.76
HMGA2-211ENST00000545998 MYO5CQ9NQX4 1742 aa32.22■■■□□ 2.75
HMGA2-211ENST00000545998 LRRC9Q6ZRR7 1453 aa32.22■■■□□ 2.75
HMGA2-211ENST00000545998 PLCH2O75038 1416 aa32.19■■■□□ 2.74
HMGA2-211ENST00000545998 APLP2Q06481 763 aa32.19■■■□□ 2.74
HMGA2-211ENST00000545998 KANK4Q5T7N3 995 aaPredicted RBP32.16■■■□□ 2.74
HMGA2-211ENST00000545998 ARAP3Q8WWN8 1544 aa32.16■■■□□ 2.74
HMGA2-211ENST00000545998 SUPT6HQ7KZ85 1726 aaKnown RBP32.14■■■□□ 2.74
HMGA2-211ENST00000545998 CDC42BPAQ5VT25 1732 aa32.14■■■□□ 2.74
HMGA2-211ENST00000545998 NEO1Q92859 1461 aa32.13■■■□□ 2.73
HMGA2-211ENST00000545998 KDM6BO15054 1643 aa32.13■■■□□ 2.73
HMGA2-211ENST00000545998 PREX2Q70Z35 1606 aa32.12■■■□□ 2.73
HMGA2-211ENST00000545998 CDC42BPBQ9Y5S2 1711 aa32.12■■■□□ 2.73
HMGA2-211ENST00000545998 FANCAO15360 1455 aa32.12■■■□□ 2.73
HMGA2-211ENST00000545998 CFAP74Q9C0B2 1584 aa32.12■■■□□ 2.73
HMGA2-211ENST00000545998 PHLDB1Q86UU1 1377 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms