RNA–Protein interactions for RNA: ENST00000545827.6

LMF1-203, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 2,731 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-203ENST00000545827 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
LMF1-203ENST00000545827 ARHGAP35Q9NRY4 1499 aa22.7■■□□□ 1.22
LMF1-203ENST00000545827 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
LMF1-203ENST00000545827 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
LMF1-203ENST00000545827 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
LMF1-203ENST00000545827 SETD5Q9C0A6 1442 aa22.67■■□□□ 1.22
LMF1-203ENST00000545827 ANP32CO43423 234 aa22.66■■□□□ 1.22
LMF1-203ENST00000545827 PPP1R15AO75807 674 aaPredicted RBP22.65■■□□□ 1.22
LMF1-203ENST00000545827 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
LMF1-203ENST00000545827 CCER2I3L3R5 266 aa22.58■■□□□ 1.21
LMF1-203ENST00000545827 DAXXQ9UER7 740 aaPredicted RBP22.58■■□□□ 1.21
LMF1-203ENST00000545827 HMGXB3Q12766 1538 aa22.58■■□□□ 1.2
LMF1-203ENST00000545827 CUX1P39880 1505 aa22.57■■□□□ 1.2
LMF1-203ENST00000545827 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
LMF1-203ENST00000545827 TIAM1Q13009 1591 aa22.54■■□□□ 1.2
LMF1-203ENST00000545827 PHLDB1Q86UU1 1377 aa22.53■■□□□ 1.2
LMF1-203ENST00000545827 MSH5O43196 834 aa22.5■■□□□ 1.19
LMF1-203ENST00000545827 IRX6P78412 446 aaPredicted RBP22.48■■□□□ 1.19
LMF1-203ENST00000545827 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
LMF1-203ENST00000545827 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
LMF1-203ENST00000545827 ERICH6Q7L0X2 663 aa22.46■■□□□ 1.19
LMF1-203ENST00000545827 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
LMF1-203ENST00000545827 HNRNPUQ00839 825 aaKnown RBP eCLIP22.44■■□□□ 1.18
LMF1-203ENST00000545827 CFTRP13569 1480 aa22.42■■□□□ 1.18
LMF1-203ENST00000545827 TONSLQ96HA7 1378 aa22.42■■□□□ 1.18
LMF1-203ENST00000545827 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
LMF1-203ENST00000545827 MAP3K1Q13233 1512 aa22.4■■□□□ 1.18
LMF1-203ENST00000545827 IGF1RP08069 1367 aa22.36■■□□□ 1.17
LMF1-203ENST00000545827 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
LMF1-203ENST00000545827 FANCIQ9NVI1 1328 aa22.33■■□□□ 1.16
LMF1-203ENST00000545827 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
LMF1-203ENST00000545827 FHAD1B1AJZ9 1412 aa22.32■■□□□ 1.16
LMF1-203ENST00000545827 PCF11O94913 1555 aaKnown RBP22.28■■□□□ 1.16
LMF1-203ENST00000545827 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
LMF1-203ENST00000545827 CFAP43Q8NDM7 1665 aa22.25■■□□□ 1.15
LMF1-203ENST00000545827 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
LMF1-203ENST00000545827 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
LMF1-203ENST00000545827 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
LMF1-203ENST00000545827 PPP4R2Q9NY27 417 aa22.16■■□□□ 1.14
LMF1-203ENST00000545827 NCBP3Q53F19 620 aaKnown RBP22.15■■□□□ 1.14
LMF1-203ENST00000545827 NESP48681 1621 aa22.14■■□□□ 1.13
LMF1-203ENST00000545827 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
LMF1-203ENST00000545827 FGD6Q6ZV73 1430 aa22.13■■□□□ 1.13
LMF1-203ENST00000545827 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
LMF1-203ENST00000545827 WASHC2AQ641Q2 1341 aa22.13■■□□□ 1.13
LMF1-203ENST00000545827 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
LMF1-203ENST00000545827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
LMF1-203ENST00000545827 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
LMF1-203ENST00000545827 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
LMF1-203ENST00000545827 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
LMF1-203ENST00000545827 CCDC184Q52MB2 194 aa22.1■■□□□ 1.13
LMF1-203ENST00000545827 PRDM2Q13029 1718 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 ERICH6BQ5W0A0 696 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 HFM1A2PYH4 1435 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 PTPRKQ15262 1439 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
LMF1-203ENST00000545827 CASKIN1Q8WXD9 1431 aa22.07■■□□□ 1.12
LMF1-203ENST00000545827 PTPN23Q9H3S7 1636 aa22.05■■□□□ 1.12
LMF1-203ENST00000545827 DEKP35659 375 aaKnown RBP22.05■■□□□ 1.12
LMF1-203ENST00000545827 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
LMF1-203ENST00000545827 MRS2Q9HD23 443 aa22.03■■□□□ 1.12
LMF1-203ENST00000545827 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
LMF1-203ENST00000545827 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
LMF1-203ENST00000545827 NAIPQ13075 1403 aa22.02■■□□□ 1.11
LMF1-203ENST00000545827 NBR1Q14596 966 aa22.01■■□□□ 1.11
LMF1-203ENST00000545827 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
LMF1-203ENST00000545827 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
LMF1-203ENST00000545827 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
LMF1-203ENST00000545827 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
LMF1-203ENST00000545827 CNTLNQ9NXG0 1405 aa21.98■■□□□ 1.11
LMF1-203ENST00000545827 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
LMF1-203ENST00000545827 EFCAB5A4FU69 1503 aa21.97■■□□□ 1.11
LMF1-203ENST00000545827 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
LMF1-203ENST00000545827 NOP58Q9Y2X3 529 aaKnown RBP21.96■■□□□ 1.11
LMF1-203ENST00000545827 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
LMF1-203ENST00000545827 CNGB1Q14028 1251 aaPredicted RBP21.93■■□□□ 1.1
LMF1-203ENST00000545827 C11orf95C9JLR9 678 aaPredicted RBP21.92■■□□□ 1.1
LMF1-203ENST00000545827 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
LMF1-203ENST00000545827 MYOM3Q5VTT5 1437 aa21.91■■□□□ 1.1
LMF1-203ENST00000545827 PAK3O75914 559 aaPredicted RBP21.9■■□□□ 1.1
LMF1-203ENST00000545827 PRKCSHP14314 528 aaPredicted RBP21.88■■□□□ 1.09
LMF1-203ENST00000545827 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
LMF1-203ENST00000545827 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
LMF1-203ENST00000545827 CCDC7Q96M83 1385 aa21.88■■□□□ 1.09
LMF1-203ENST00000545827 FOXD1Q16676 465 aa21.87■■□□□ 1.09
LMF1-203ENST00000545827 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
LMF1-203ENST00000545827 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
LMF1-203ENST00000545827 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
LMF1-203ENST00000545827 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 NCOA1Q15788 1441 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 SENP3-EIF4A1A0A087X0R7 540 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 CCDC136Q96JN2 1154 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 AKNAQ7Z591 1439 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 ANP32AP39687 249 aaKnown RBP21.81■■□□□ 1.08
LMF1-203ENST00000545827 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
LMF1-203ENST00000545827 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
LMF1-203ENST00000545827 URB2Q14146 1524 aaKnown RBP21.79■■□□□ 1.08
LMF1-203ENST00000545827 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
LMF1-203ENST00000545827 DENND4BO75064 1496 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms