RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 IGF1RP08069 1367 aa21.74■■□□□ 1.07
ACTN1-206ENST00000544964 KIF13AQ9H1H9 1805 aa21.72■■□□□ 1.07
ACTN1-206ENST00000544964 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
ACTN1-206ENST00000544964 KIAA0586Q9BVV6 1533 aa21.69■■□□□ 1.06
ACTN1-206ENST00000544964 ADCY10Q96PN6 1610 aa21.66■■□□□ 1.06
ACTN1-206ENST00000544964 MAPKBP1O60336 1514 aa21.6■■□□□ 1.05
ACTN1-206ENST00000544964 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
ACTN1-206ENST00000544964 DIP2BQ9P265 1576 aa21.55■■□□□ 1.04
ACTN1-206ENST00000544964 ABCC10Q5T3U5 1492 aa21.54■■□□□ 1.04
ACTN1-206ENST00000544964 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
ACTN1-206ENST00000544964 PTPRGP23470 1445 aa21.43■■□□□ 1.02
ACTN1-206ENST00000544964 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
ACTN1-206ENST00000544964 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
ACTN1-206ENST00000544964 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
ACTN1-206ENST00000544964 CARMIL2Q6F5E8 1435 aa21.41■■□□□ 1.02
ACTN1-206ENST00000544964 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
ACTN1-206ENST00000544964 FAM69CQ0P6D2 419 aa21.41■■□□□ 1.02
ACTN1-206ENST00000544964 ABCC2Q92887 1545 aa21.39■■□□□ 1.01
ACTN1-206ENST00000544964 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.01
ACTN1-206ENST00000544964 TSPOAP1O95153 1857 aa21.37■■□□□ 1.01
ACTN1-206ENST00000544964 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
ACTN1-206ENST00000544964 UHRF1BP1LA0JNW5 1464 aa21.35■■□□□ 1.01
ACTN1-206ENST00000544964 CTTNBP2Q8WZ74 1663 aa21.34■■□□□ 1.01
ACTN1-206ENST00000544964 KDM6BO15054 1643 aa21.32■■□□□ 1
ACTN1-206ENST00000544964 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
ACTN1-206ENST00000544964 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
ACTN1-206ENST00000544964 UACAQ9BZF9 1416 aa21.3■■□□□ 1
ACTN1-206ENST00000544964 PPRC1Q5VV67 1664 aaKnown RBP21.3■■□□□ 1
ACTN1-206ENST00000544964 ASXL2Q76L83 1435 aa21.29■■□□□ 1
ACTN1-206ENST00000544964 GLI2P10070 1586 aa21.28■■□□□ 1
ACTN1-206ENST00000544964 KDM5BQ9UGL1 1544 aa21.27■■□□□ 1
ACTN1-206ENST00000544964 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
ACTN1-206ENST00000544964 ZCCHC11Q5TAX3 1644 aaKnown RBP21.26■□□□□ 0.99
ACTN1-206ENST00000544964 PRXQ9BXM0 1461 aa21.24■□□□□ 0.99
ACTN1-206ENST00000544964 MAP3K4Q9Y6R4 1608 aa21.2■□□□□ 0.98
ACTN1-206ENST00000544964 EPRSP07814 1512 aaKnown RBP21.19■□□□□ 0.98
ACTN1-206ENST00000544964 ABCA8O94911 1581 aa21.15■□□□□ 0.98
ACTN1-206ENST00000544964 GOLGA3Q08378 1498 aa21.14■□□□□ 0.98
ACTN1-206ENST00000544964 WDR7Q9Y4E6 1490 aa21.11■□□□□ 0.97
ACTN1-206ENST00000544964 COL17A1Q9UMD9 1497 aaPredicted RBP21.07■□□□□ 0.96
ACTN1-206ENST00000544964 TEX14Q8IWB6 1497 aa21.05■□□□□ 0.96
ACTN1-206ENST00000544964 SAMD9Q5K651 1589 aa21.03■□□□□ 0.96
ACTN1-206ENST00000544964 KDM4FA0A1W2PPD8 638 aa21.02■□□□□ 0.96
ACTN1-206ENST00000544964 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.95
ACTN1-206ENST00000544964 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
ACTN1-206ENST00000544964 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
ACTN1-206ENST00000544964 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
ACTN1-206ENST00000544964 EEA1Q15075 1411 aa20.93■□□□□ 0.94
ACTN1-206ENST00000544964 ADGRL1O94910 1474 aa20.93■□□□□ 0.94
ACTN1-206ENST00000544964 CD109Q6YHK3 1445 aa20.92■□□□□ 0.94
ACTN1-206ENST00000544964 ATP10BO94823 1461 aa20.91■□□□□ 0.94
ACTN1-206ENST00000544964 RAPGEF6Q8TEU7 1601 aa20.91■□□□□ 0.94
ACTN1-206ENST00000544964 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
ACTN1-206ENST00000544964 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
ACTN1-206ENST00000544964 KIF21BO75037 1637 aa20.86■□□□□ 0.93
ACTN1-206ENST00000544964 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
ACTN1-206ENST00000544964 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.93
ACTN1-206ENST00000544964 ARID3CA6NKF2 412 aa20.83■□□□□ 0.93
ACTN1-206ENST00000544964 FHOD3Q2V2M9 1422 aa20.81■□□□□ 0.92
ACTN1-206ENST00000544964 ARAP3Q8WWN8 1544 aa20.79■□□□□ 0.92
ACTN1-206ENST00000544964 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
ACTN1-206ENST00000544964 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
ACTN1-206ENST00000544964 FRMPD1Q5SYB0 1578 aa20.72■□□□□ 0.91
ACTN1-206ENST00000544964 NEO1Q92859 1461 aa20.7■□□□□ 0.9
ACTN1-206ENST00000544964 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
ACTN1-206ENST00000544964 PHLDB1Q86UU1 1377 aa20.68■□□□□ 0.9
ACTN1-206ENST00000544964 HECW2Q9P2P5 1572 aa20.67■□□□□ 0.9
ACTN1-206ENST00000544964 TTC37Q6PGP7 1564 aa20.65■□□□□ 0.9
ACTN1-206ENST00000544964 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
ACTN1-206ENST00000544964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
ACTN1-206ENST00000544964 RICTORQ6R327 1708 aa20.62■□□□□ 0.89
ACTN1-206ENST00000544964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
ACTN1-206ENST00000544964 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
ACTN1-206ENST00000544964 CFAP74Q9C0B2 1584 aa20.6■□□□□ 0.89
ACTN1-206ENST00000544964 ADAMTSL3P82987 1691 aa20.6■□□□□ 0.89
ACTN1-206ENST00000544964 ARHGEF40Q8TER5 1519 aa20.59■□□□□ 0.89
ACTN1-206ENST00000544964 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
ACTN1-206ENST00000544964 ARHGAP35Q9NRY4 1499 aa20.58■□□□□ 0.89
ACTN1-206ENST00000544964 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
ACTN1-206ENST00000544964 FANCAO15360 1455 aa20.56■□□□□ 0.88
ACTN1-206ENST00000544964 BCORL1Q5H9F3 1711 aa20.56■□□□□ 0.88
ACTN1-206ENST00000544964 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
ACTN1-206ENST00000544964 ZMYM4Q5VZL5 1548 aa20.53■□□□□ 0.88
ACTN1-206ENST00000544964 LRRIQ1Q96JM4 1722 aa20.53■□□□□ 0.88
ACTN1-206ENST00000544964 DENND4BO75064 1496 aaPredicted RBP20.53■□□□□ 0.88
ACTN1-206ENST00000544964 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
ACTN1-206ENST00000544964 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
ACTN1-206ENST00000544964 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
ACTN1-206ENST00000544964 SIGLEC1Q9BZZ2 1709 aa20.5■□□□□ 0.87
ACTN1-206ENST00000544964 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
ACTN1-206ENST00000544964 PTPRMP28827 1452 aa20.5■□□□□ 0.87
ACTN1-206ENST00000544964 UBTFP17480 764 aaKnown RBP20.49■□□□□ 0.87
ACTN1-206ENST00000544964 KIF14Q15058 1648 aa20.49■□□□□ 0.87
ACTN1-206ENST00000544964 MYO5CQ9NQX4 1742 aa20.48■□□□□ 0.87
ACTN1-206ENST00000544964 ZFYVE16Q7Z3T8 1539 aa20.45■□□□□ 0.86
ACTN1-206ENST00000544964 PLCH2O75038 1416 aa20.44■□□□□ 0.86
ACTN1-206ENST00000544964 POGZQ7Z3K3 1410 aa20.44■□□□□ 0.86
ACTN1-206ENST00000544964 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
ACTN1-206ENST00000544964 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
ACTN1-206ENST00000544964 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms