RNA–Protein interactions for RNA: ENST00000544218.5

HPS5-209, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 3

Gene HPS5, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-209ENST00000544218 C7P10643 843 aa12.72□□□□□ -0.37
HPS5-209ENST00000544218 SLC39A7Q92504 469 aa12.72□□□□□ -0.37
HPS5-209ENST00000544218 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
HPS5-209ENST00000544218 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
HPS5-209ENST00000544218 ATMINO43313 823 aaPredicted RBP12.67□□□□□ -0.38
HPS5-209ENST00000544218 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
HPS5-209ENST00000544218 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
HPS5-209ENST00000544218 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
HPS5-209ENST00000544218 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
HPS5-209ENST00000544218 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
HPS5-209ENST00000544218 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
HPS5-209ENST00000544218 POTEFA5A3E0 1075 aa12.46□□□□□ -0.41
HPS5-209ENST00000544218 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
HPS5-209ENST00000544218 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
HPS5-209ENST00000544218 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
HPS5-209ENST00000544218 ST18O60284 1047 aa12.34□□□□□ -0.43
HPS5-209ENST00000544218 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
HPS5-209ENST00000544218 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
HPS5-209ENST00000544218 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
HPS5-209ENST00000544218 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
HPS5-209ENST00000544218 SEC24BO95487 1268 aa12.26□□□□□ -0.45
HPS5-209ENST00000544218 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
HPS5-209ENST00000544218 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
HPS5-209ENST00000544218 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
HPS5-209ENST00000544218 TIE1P35590 1138 aa12.2□□□□□ -0.46
HPS5-209ENST00000544218 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
HPS5-209ENST00000544218 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
HPS5-209ENST00000544218 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
HPS5-209ENST00000544218 MAP3K13O43283 966 aa12.12□□□□□ -0.47
HPS5-209ENST00000544218 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
HPS5-209ENST00000544218 IER5LQ5T953 404 aa12.08□□□□□ -0.48
HPS5-209ENST00000544218 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
HPS5-209ENST00000544218 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
HPS5-209ENST00000544218 UNC13AQ9UPW8 1703 aa12.02□□□□□ -0.49
HPS5-209ENST00000544218 NACADO15069 1562 aa11.96□□□□□ -0.5
HPS5-209ENST00000544218 SNPHO15079 494 aa11.95□□□□□ -0.5
HPS5-209ENST00000544218 PLCG2P16885 1265 aa11.93□□□□□ -0.5
HPS5-209ENST00000544218 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
HPS5-209ENST00000544218 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
HPS5-209ENST00000544218 KRTAP3-2Q9BYR7 98 aa11.9□□□□□ -0.5
HPS5-209ENST00000544218 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
HPS5-209ENST00000544218 EMP3P54852 163 aa11.86□□□□□ -0.51
HPS5-209ENST00000544218 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
HPS5-209ENST00000544218 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
HPS5-209ENST00000544218 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
HPS5-209ENST00000544218 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
HPS5-209ENST00000544218 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
HPS5-209ENST00000544218 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
HPS5-209ENST00000544218 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
HPS5-209ENST00000544218 DCAF8L2P0C7V8 631 aa11.8□□□□□ -0.52
HPS5-209ENST00000544218 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
HPS5-209ENST00000544218 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
HPS5-209ENST00000544218 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
HPS5-209ENST00000544218 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
HPS5-209ENST00000544218 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
HPS5-209ENST00000544218 MIER1Q8N108 512 aa11.69□□□□□ -0.54
HPS5-209ENST00000544218 PROM2Q8N271 834 aa11.65□□□□□ -0.54
HPS5-209ENST00000544218 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
HPS5-209ENST00000544218 MYO15BQ96JP2 1530 aa11.64□□□□□ -0.55
HPS5-209ENST00000544218 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
HPS5-209ENST00000544218 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
HPS5-209ENST00000544218 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
HPS5-209ENST00000544218 CECR2Q9BXF3 1484 aa11.56□□□□□ -0.56
HPS5-209ENST00000544218 NUBP1P53384 320 aa11.55□□□□□ -0.56
HPS5-209ENST00000544218 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
HPS5-209ENST00000544218 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
HPS5-209ENST00000544218 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
HPS5-209ENST00000544218 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
HPS5-209ENST00000544218 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
HPS5-209ENST00000544218 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
HPS5-209ENST00000544218 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
HPS5-209ENST00000544218 ZCCHC6Q5VYS8 1495 aaKnown RBP11.47□□□□□ -0.57
HPS5-209ENST00000544218 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
HPS5-209ENST00000544218 ERBB3P21860 1342 aa11.43□□□□□ -0.58
HPS5-209ENST00000544218 DCAF1Q9Y4B6 1507 aa11.43□□□□□ -0.58
HPS5-209ENST00000544218 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
HPS5-209ENST00000544218 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
HPS5-209ENST00000544218 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
HPS5-209ENST00000544218 HOXB1P14653 301 aaPredicted RBP11.4□□□□□ -0.58
HPS5-209ENST00000544218 PYGBP11216 843 aa11.38□□□□□ -0.59
HPS5-209ENST00000544218 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
HPS5-209ENST00000544218 ZNF710Q8N1W2 664 aa11.36□□□□□ -0.59
HPS5-209ENST00000544218 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
HPS5-209ENST00000544218 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
HPS5-209ENST00000544218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
HPS5-209ENST00000544218 PTGER2P43116 358 aa11.29□□□□□ -0.6
HPS5-209ENST00000544218 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
HPS5-209ENST00000544218 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
HPS5-209ENST00000544218 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
HPS5-209ENST00000544218 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
HPS5-209ENST00000544218 ZNF687Q8N1G0 1237 aa11.25□□□□□ -0.61
HPS5-209ENST00000544218 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
HPS5-209ENST00000544218 ILDR1Q86SU0 546 aaPredicted RBP11.2□□□□□ -0.62
HPS5-209ENST00000544218 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
HPS5-209ENST00000544218 G3V3G9 751 aa11.18□□□□□ -0.62
HPS5-209ENST00000544218 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
HPS5-209ENST00000544218 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
HPS5-209ENST00000544218 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
HPS5-209ENST00000544218 CUX2O14529 1486 aa11.13□□□□□ -0.63
HPS5-209ENST00000544218 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms