RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.37
AFF1-211ENST00000544085 VPS8Q8N3P4 1428 aa12.69□□□□□ -0.38
AFF1-211ENST00000544085 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
AFF1-211ENST00000544085 MAGI1Q96QZ7 1491 aaPredicted RBP12.68□□□□□ -0.38
AFF1-211ENST00000544085 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
AFF1-211ENST00000544085 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
AFF1-211ENST00000544085 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
AFF1-211ENST00000544085 EFCAB5A4FU69 1503 aa12.66□□□□□ -0.38
AFF1-211ENST00000544085 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
AFF1-211ENST00000544085 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
AFF1-211ENST00000544085 ARAP1Q96P48 1450 aa12.64□□□□□ -0.39
AFF1-211ENST00000544085 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
AFF1-211ENST00000544085 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
AFF1-211ENST00000544085 GRIN2AQ12879 1464 aa12.6□□□□□ -0.39
AFF1-211ENST00000544085 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
AFF1-211ENST00000544085 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
AFF1-211ENST00000544085 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
AFF1-211ENST00000544085 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
AFF1-211ENST00000544085 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
AFF1-211ENST00000544085 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
AFF1-211ENST00000544085 UGGT2Q9NYU1 1516 aa12.53□□□□□ -0.4
AFF1-211ENST00000544085 NUP160Q12769 1436 aa12.52□□□□□ -0.41
AFF1-211ENST00000544085 FBLN2P98095 1184 aa12.51□□□□□ -0.41
AFF1-211ENST00000544085 FHOD3Q2V2M9 1422 aa12.51□□□□□ -0.41
AFF1-211ENST00000544085 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
AFF1-211ENST00000544085 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
AFF1-211ENST00000544085 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
AFF1-211ENST00000544085 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
AFF1-211ENST00000544085 PPARGC1BQ86YN6 1023 aaKnown RBP12.49□□□□□ -0.41
AFF1-211ENST00000544085 CEP170Q5SW79 1584 aa12.49□□□□□ -0.41
AFF1-211ENST00000544085 PCF11O94913 1555 aaKnown RBP12.46□□□□□ -0.42
AFF1-211ENST00000544085 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
AFF1-211ENST00000544085 TIAM1Q13009 1591 aa12.44□□□□□ -0.42
AFF1-211ENST00000544085 KIAA0556O60303 1618 aa12.44□□□□□ -0.42
AFF1-211ENST00000544085 CHD1O14646 1710 aa12.43□□□□□ -0.42
AFF1-211ENST00000544085 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
AFF1-211ENST00000544085 DISP1Q96F81 1524 aa12.41□□□□□ -0.42
AFF1-211ENST00000544085 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
AFF1-211ENST00000544085 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
AFF1-211ENST00000544085 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
AFF1-211ENST00000544085 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
AFF1-211ENST00000544085 LRRC9Q6ZRR7 1453 aa12.38□□□□□ -0.43
AFF1-211ENST00000544085 KANK4Q5T7N3 995 aaPredicted RBP12.37□□□□□ -0.43
AFF1-211ENST00000544085 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
AFF1-211ENST00000544085 SHROOM2Q13796 1616 aa12.33□□□□□ -0.44
AFF1-211ENST00000544085 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
AFF1-211ENST00000544085 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.44
AFF1-211ENST00000544085 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
AFF1-211ENST00000544085 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
AFF1-211ENST00000544085 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
AFF1-211ENST00000544085 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
AFF1-211ENST00000544085 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
AFF1-211ENST00000544085 HRCP23327 699 aa12.3□□□□□ -0.44
AFF1-211ENST00000544085 CDK11AQ9UQ88 783 aaPredicted RBP12.3□□□□□ -0.44
AFF1-211ENST00000544085 PTPRGP23470 1445 aa12.28□□□□□ -0.44
AFF1-211ENST00000544085 CCNB3Q8WWL7 1395 aa12.27□□□□□ -0.44
AFF1-211ENST00000544085 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.44
AFF1-211ENST00000544085 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.45
AFF1-211ENST00000544085 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.45
AFF1-211ENST00000544085 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
AFF1-211ENST00000544085 ABCA8O94911 1581 aa12.26□□□□□ -0.45
AFF1-211ENST00000544085 PLEKHG5O94827 1062 aa12.24□□□□□ -0.45
AFF1-211ENST00000544085 PLB1Q6P1J6 1458 aa12.24□□□□□ -0.45
AFF1-211ENST00000544085 CDK13Q14004 1512 aaKnown RBP12.24□□□□□ -0.45
AFF1-211ENST00000544085 PHLDB1Q86UU1 1377 aa12.23□□□□□ -0.45
AFF1-211ENST00000544085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.23□□□□□ -0.45
AFF1-211ENST00000544085 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
AFF1-211ENST00000544085 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
AFF1-211ENST00000544085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.22□□□□□ -0.45
AFF1-211ENST00000544085 ZEB1P37275 1124 aaPredicted RBP12.22□□□□□ -0.45
AFF1-211ENST00000544085 HNRNPUL2Q1KMD3 747 aaKnown RBP12.22□□□□□ -0.45
AFF1-211ENST00000544085 UACAQ9BZF9 1416 aa12.21□□□□□ -0.45
AFF1-211ENST00000544085 MYOM3Q5VTT5 1437 aa12.2□□□□□ -0.46
AFF1-211ENST00000544085 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
AFF1-211ENST00000544085 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
AFF1-211ENST00000544085 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
AFF1-211ENST00000544085 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
AFF1-211ENST00000544085 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
AFF1-211ENST00000544085 ABCC2Q92887 1545 aa12.17□□□□□ -0.46
AFF1-211ENST00000544085 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
AFF1-211ENST00000544085 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
AFF1-211ENST00000544085 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
AFF1-211ENST00000544085 ATP10BO94823 1461 aa12.16□□□□□ -0.46
AFF1-211ENST00000544085 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
AFF1-211ENST00000544085 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
AFF1-211ENST00000544085 ADCY10Q96PN6 1610 aa12.15□□□□□ -0.46
AFF1-211ENST00000544085 TCOF1Q13428 1488 aaKnown RBP12.13□□□□□ -0.47
AFF1-211ENST00000544085 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
AFF1-211ENST00000544085 KIF14Q15058 1648 aa12.12□□□□□ -0.47
AFF1-211ENST00000544085 PTPN23Q9H3S7 1636 aa12.12□□□□□ -0.47
AFF1-211ENST00000544085 ITSN2Q9NZM3 1697 aa12.11□□□□□ -0.47
AFF1-211ENST00000544085 ITGAEP38570 1179 aa12.1□□□□□ -0.47
AFF1-211ENST00000544085 KDM5BQ9UGL1 1544 aa12.08□□□□□ -0.48
AFF1-211ENST00000544085 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
AFF1-211ENST00000544085 ABCC10Q5T3U5 1492 aa12.05□□□□□ -0.48
AFF1-211ENST00000544085 ZCCHC11Q5TAX3 1644 aaKnown RBP12.05□□□□□ -0.48
AFF1-211ENST00000544085 GPATCH8Q9UKJ3 1502 aaKnown RBP12.05□□□□□ -0.48
AFF1-211ENST00000544085 CFDP1Q9UEE9 299 aaPredicted RBP12.05□□□□□ -0.48
AFF1-211ENST00000544085 ACIN1Q9UKV3 1341 aaKnown RBP12.04□□□□□ -0.48
AFF1-211ENST00000544085 CLSPNQ9HAW4 1339 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms