RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ERCC6L2Q5T890 1561 aa36.71■■■■□ 3.47
OTUB1-212ENST00000543988 RAPGEF2Q9Y4G8 1499 aa36.7■■■■□ 3.47
OTUB1-212ENST00000543988 KIAA0586Q9BVV6 1533 aa36.69■■■■□ 3.46
OTUB1-212ENST00000543988 JPH4Q96JJ6 628 aa36.64■■■■□ 3.46
OTUB1-212ENST00000543988 PRG4Q92954 1404 aaPredicted RBP36.62■■■■□ 3.45
OTUB1-212ENST00000543988 PRXQ9BXM0 1461 aa36.61■■■■□ 3.45
OTUB1-212ENST00000543988 EEA1Q15075 1411 aa36.56■■■■□ 3.44
OTUB1-212ENST00000543988 CSRNP3Q8WYN3 585 aa36.51■■■■□ 3.44
OTUB1-212ENST00000543988 IQGAP2Q13576 1575 aa36.49■■■■□ 3.43
OTUB1-212ENST00000543988 FAM9AQ8IZU1 332 aaPredicted RBP36.43■■■■□ 3.42
OTUB1-212ENST00000543988 UGGT2Q9NYU1 1516 aa36.3■■■■□ 3.4
OTUB1-212ENST00000543988 CTTNBP2Q8WZ74 1663 aa36.29■■■■□ 3.4
OTUB1-212ENST00000543988 CARMIL2Q6F5E8 1435 aa36.28■■■■□ 3.4
OTUB1-212ENST00000543988 DISP1Q96F81 1524 aa36.26■■■■□ 3.4
OTUB1-212ENST00000543988 KIF21BO75037 1637 aa36.19■■■■□ 3.38
OTUB1-212ENST00000543988 TNIKQ9UKE5 1360 aa36.19■■■■□ 3.38
OTUB1-212ENST00000543988 PTPRGP23470 1445 aa36.17■■■■□ 3.38
OTUB1-212ENST00000543988 KIAA0556O60303 1618 aa36.16■■■■□ 3.38
OTUB1-212ENST00000543988 TTBK1Q5TCY1 1321 aaPredicted RBP36.11■■■■□ 3.37
OTUB1-212ENST00000543988 GOLGA3Q08378 1498 aa36.07■■■■□ 3.37
OTUB1-212ENST00000543988 ADCY10Q96PN6 1610 aa36.06■■■■□ 3.36
OTUB1-212ENST00000543988 TRHP20396 242 aaPredicted RBP35.99■■■■□ 3.35
OTUB1-212ENST00000543988 EHMT2Q96KQ7 1210 aa35.97■■■■□ 3.35
OTUB1-212ENST00000543988 UACAQ9BZF9 1416 aa35.92■■■■□ 3.34
OTUB1-212ENST00000543988 SAMD9Q5K651 1589 aa35.9■■■■□ 3.34
OTUB1-212ENST00000543988 UHRF1BP1LA0JNW5 1464 aa35.9■■■■□ 3.34
OTUB1-212ENST00000543988 NPM1P06748 294 aaKnown RBP eCLIP35.88■■■■□ 3.33
OTUB1-212ENST00000543988 ABCC2Q92887 1545 aa35.88■■■■□ 3.33
OTUB1-212ENST00000543988 UBTFP17480 764 aaKnown RBP35.86■■■■□ 3.33
OTUB1-212ENST00000543988 RANGAP1P46060 587 aaPredicted RBP35.85■■■■□ 3.33
OTUB1-212ENST00000543988 P3H3Q8IVL6 736 aa35.85■■■■□ 3.33
OTUB1-212ENST00000543988 MAPKBP1O60336 1514 aa35.83■■■■□ 3.33
OTUB1-212ENST00000543988 PLB1Q6P1J6 1458 aa35.82■■■■□ 3.32
OTUB1-212ENST00000543988 ABCA8O94911 1581 aa35.76■■■■□ 3.32
OTUB1-212ENST00000543988 EFCAB5A4FU69 1503 aa35.74■■■■□ 3.31
OTUB1-212ENST00000543988 FHOD3Q2V2M9 1422 aa35.74■■■■□ 3.31
OTUB1-212ENST00000543988 KDM5BQ9UGL1 1544 aa35.73■■■■□ 3.31
OTUB1-212ENST00000543988 ABCC10Q5T3U5 1492 aa35.67■■■■□ 3.3
OTUB1-212ENST00000543988 ASXL2Q76L83 1435 aa35.65■■■■□ 3.3
OTUB1-212ENST00000543988 ZCCHC11Q5TAX3 1644 aaKnown RBP35.64■■■■□ 3.3
OTUB1-212ENST00000543988 DIP2BQ9P265 1576 aa35.63■■■■□ 3.29
OTUB1-212ENST00000543988 KIF13AQ9H1H9 1805 aa35.6■■■■□ 3.29
OTUB1-212ENST00000543988 ARHGAP35Q9NRY4 1499 aa35.59■■■■□ 3.29
OTUB1-212ENST00000543988 FAM69CQ0P6D2 419 aa35.58■■■■□ 3.29
OTUB1-212ENST00000543988 RAPGEF6Q8TEU7 1601 aa35.54■■■■□ 3.28
OTUB1-212ENST00000543988 ARID3CA6NKF2 412 aa35.5■■■■□ 3.27
OTUB1-212ENST00000543988 NUP153P49790 1475 aaKnown RBP35.48■■■■□ 3.27
OTUB1-212ENST00000543988 WDR7Q9Y4E6 1490 aa35.47■■■■□ 3.27
OTUB1-212ENST00000543988 ATP10BO94823 1461 aa35.46■■■■□ 3.27
OTUB1-212ENST00000543988 EPRSP07814 1512 aaKnown RBP35.43■■■■□ 3.26
OTUB1-212ENST00000543988 GLI2P10070 1586 aa35.4■■■■□ 3.26
OTUB1-212ENST00000543988 FMN1Q68DA7 1419 aa35.4■■■■□ 3.26
OTUB1-212ENST00000543988 CLIP1P30622 1438 aa35.36■■■■□ 3.25
OTUB1-212ENST00000543988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.27■■■■□ 3.24
OTUB1-212ENST00000543988 HNRNPUL2Q1KMD3 747 aaKnown RBP35.27■■■■□ 3.24
OTUB1-212ENST00000543988 KCNH8Q96L42 1107 aa35.25■■■■□ 3.23
OTUB1-212ENST00000543988 LOC105371045A0A1W2PR82 267 aa35.23■■■■□ 3.23
OTUB1-212ENST00000543988 HECW1Q76N89 1606 aa35.23■■■■□ 3.23
OTUB1-212ENST00000543988 MAP3K4Q9Y6R4 1608 aa35.23■■■■□ 3.23
OTUB1-212ENST00000543988 CDK13Q14004 1512 aaKnown RBP35.22■■■■□ 3.23
OTUB1-212ENST00000543988 TSPOAP1O95153 1857 aa35.21■■■■□ 3.23
OTUB1-212ENST00000543988 CEP162Q5TB80 1403 aa35.21■■■■□ 3.23
OTUB1-212ENST00000543988 PPRC1Q5VV67 1664 aaKnown RBP35.18■■■■□ 3.22
OTUB1-212ENST00000543988 ATP1B4Q9UN42 357 aaPredicted RBP35.18■■■■□ 3.22
OTUB1-212ENST00000543988 PCF11O94913 1555 aaKnown RBP35.16■■■■□ 3.22
OTUB1-212ENST00000543988 CASKIN1Q8WXD9 1431 aa35.15■■■■□ 3.22
OTUB1-212ENST00000543988 CD109Q6YHK3 1445 aa35.11■■■■□ 3.21
OTUB1-212ENST00000543988 PLEKHD1A6NEE1 506 aa35.1■■■■□ 3.21
OTUB1-212ENST00000543988 CFAP43Q8NDM7 1665 aa35.09■■■■□ 3.21
OTUB1-212ENST00000543988 TEX14Q8IWB6 1497 aa35.07■■■■□ 3.2
OTUB1-212ENST00000543988 FYCO1Q9BQS8 1478 aa35.06■■■■□ 3.2
OTUB1-212ENST00000543988 ABCA9Q8IUA7 1624 aa35.06■■■■□ 3.2
OTUB1-212ENST00000543988 MAGI3Q5TCQ9 1506 aa35.05■■■■□ 3.2
OTUB1-212ENST00000543988 KDM6BO15054 1643 aa35.03■■■■□ 3.2
OTUB1-212ENST00000543988 LRRIQ1Q96JM4 1722 aa35.01■■■■□ 3.19
OTUB1-212ENST00000543988 CCDC18Q5T9S5 1454 aa34.99■■■■□ 3.19
OTUB1-212ENST00000543988 CDK11AQ9UQ88 783 aaPredicted RBP34.94■■■■□ 3.18
OTUB1-212ENST00000543988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.92■■■■□ 3.18
OTUB1-212ENST00000543988 COL17A1Q9UMD9 1497 aaPredicted RBP34.92■■■■□ 3.18
OTUB1-212ENST00000543988 TROQ12816 1431 aaPredicted RBP34.91■■■■□ 3.18
OTUB1-212ENST00000543988 TTC37Q6PGP7 1564 aa34.91■■■■□ 3.18
OTUB1-212ENST00000543988 KIF14Q15058 1648 aa34.84■■■■□ 3.17
OTUB1-212ENST00000543988 NEO1Q92859 1461 aa34.78■■■■□ 3.16
OTUB1-212ENST00000543988 VPS8Q8N3P4 1428 aa34.77■■■■□ 3.16
OTUB1-212ENST00000543988 ARAP3Q8WWN8 1544 aa34.75■■■■□ 3.15
OTUB1-212ENST00000543988 PHLDB1Q86UU1 1377 aa34.74■■■■□ 3.15
OTUB1-212ENST00000543988 FANCAO15360 1455 aa34.72■■■■□ 3.15
OTUB1-212ENST00000543988 PLCH2O75038 1416 aa34.71■■■■□ 3.15
OTUB1-212ENST00000543988 CFAP74Q9C0B2 1584 aa34.65■■■■□ 3.14
OTUB1-212ENST00000543988 AKNAQ7Z591 1439 aa34.64■■■■□ 3.14
OTUB1-212ENST00000543988 MTUS2Q5JR59 1369 aa34.63■■■■□ 3.13
OTUB1-212ENST00000543988 MYO5CQ9NQX4 1742 aa34.63■■■■□ 3.13
OTUB1-212ENST00000543988 RAPGEF3O95398 923 aa34.58■■■■□ 3.13
OTUB1-212ENST00000543988 EHBP1L1Q8N3D4 1523 aa34.58■■■■□ 3.13
OTUB1-212ENST00000543988 ARHGAP5Q13017 1502 aa34.57■■■■□ 3.12
OTUB1-212ENST00000543988 FRMPD1Q5SYB0 1578 aa34.57■■■■□ 3.12
OTUB1-212ENST00000543988 TIAM1Q13009 1591 aa34.56■■■■□ 3.12
OTUB1-212ENST00000543988 EFCAB2Q5VUJ9 269 aa34.55■■■■□ 3.12
OTUB1-212ENST00000543988 DENND4BO75064 1496 aaPredicted RBP34.54■■■■□ 3.12
OTUB1-212ENST00000543988 ADGRL1O94910 1474 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms