RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
RAP1B-230ENST00000543697 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
RAP1B-230ENST00000543697 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
RAP1B-230ENST00000543697 MYO15BQ96JP2 1530 aa14.75□□□□□ -0.05
RAP1B-230ENST00000543697 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
RAP1B-230ENST00000543697 RGL2O15211 777 aa14.7□□□□□ -0.06
RAP1B-230ENST00000543697 NUBP1P53384 320 aa14.66□□□□□ -0.06
RAP1B-230ENST00000543697 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
RAP1B-230ENST00000543697 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
RAP1B-230ENST00000543697 CREBZFQ9NS37 354 aa14.64□□□□□ -0.07
RAP1B-230ENST00000543697 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
RAP1B-230ENST00000543697 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
RAP1B-230ENST00000543697 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
RAP1B-230ENST00000543697 DCAF8Q5TAQ9 597 aa14.57□□□□□ -0.08
RAP1B-230ENST00000543697 CHRM1P11229 460 aaPredicted RBP14.56□□□□□ -0.08
RAP1B-230ENST00000543697 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
RAP1B-230ENST00000543697 HS6ST3Q8IZP7 471 aa14.56□□□□□ -0.08
RAP1B-230ENST00000543697 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
RAP1B-230ENST00000543697 SPRYD3Q8NCJ5 442 aa14.55□□□□□ -0.08
RAP1B-230ENST00000543697 CHGAP10645 457 aaKnown RBP14.53□□□□□ -0.08
RAP1B-230ENST00000543697 RIOK3O14730 519 aaKnown RBP14.51□□□□□ -0.09
RAP1B-230ENST00000543697 PAXIP1Q6ZW49 1069 aaPredicted RBP14.51□□□□□ -0.09
RAP1B-230ENST00000543697 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
RAP1B-230ENST00000543697 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
RAP1B-230ENST00000543697 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
RAP1B-230ENST00000543697 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.09
RAP1B-230ENST00000543697 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
RAP1B-230ENST00000543697 ILDR1Q86SU0 546 aaPredicted RBP14.44□□□□□ -0.1
RAP1B-230ENST00000543697 SGIP1Q9BQI5 828 aa14.43□□□□□ -0.1
RAP1B-230ENST00000543697 RNF25Q96BH1 459 aaPredicted RBP14.42□□□□□ -0.1
RAP1B-230ENST00000543697 RASEFQ8IZ41 740 aa14.4□□□□□ -0.1
RAP1B-230ENST00000543697 BCANQ96GW7 911 aa14.4□□□□□ -0.1
RAP1B-230ENST00000543697 RYDENQ9NUL5 291 aaKnown RBP14.4□□□□□ -0.1
RAP1B-230ENST00000543697 NESP48681 1621 aa14.39□□□□□ -0.11
RAP1B-230ENST00000543697 RIMBP3CA6NJZ7 1639 aa14.32□□□□□ -0.12
RAP1B-230ENST00000543697 RIMBP3BA6NNM3 1639 aa14.32□□□□□ -0.12
RAP1B-230ENST00000543697 RIMBP3Q9UFD9 1639 aa14.32□□□□□ -0.12
RAP1B-230ENST00000543697 STK25O00506 426 aa14.3□□□□□ -0.12
RAP1B-230ENST00000543697 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
RAP1B-230ENST00000543697 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
RAP1B-230ENST00000543697 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
RAP1B-230ENST00000543697 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
RAP1B-230ENST00000543697 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
RAP1B-230ENST00000543697 PYGBP11216 843 aa14.23□□□□□ -0.13
RAP1B-230ENST00000543697 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
RAP1B-230ENST00000543697 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
RAP1B-230ENST00000543697 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
RAP1B-230ENST00000543697 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
RAP1B-230ENST00000543697 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
RAP1B-230ENST00000543697 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
RAP1B-230ENST00000543697 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
RAP1B-230ENST00000543697 TSHZ2Q9NRE2 1034 aa14.19□□□□□ -0.14
RAP1B-230ENST00000543697 BCL11BQ9C0K0 894 aaPredicted RBP14.18□□□□□ -0.14
RAP1B-230ENST00000543697 STK24Q9Y6E0 443 aa14.18□□□□□ -0.14
RAP1B-230ENST00000543697 GTPBP6O43824 516 aaPredicted RBP14.16□□□□□ -0.14
RAP1B-230ENST00000543697 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
RAP1B-230ENST00000543697 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
RAP1B-230ENST00000543697 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
RAP1B-230ENST00000543697 PDAP1Q13442 181 aaKnown RBP14.14□□□□□ -0.15
RAP1B-230ENST00000543697 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
RAP1B-230ENST00000543697 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
RAP1B-230ENST00000543697 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
RAP1B-230ENST00000543697 CCDC61Q9Y6R9 512 aa14.12□□□□□ -0.15
RAP1B-230ENST00000543697 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
RAP1B-230ENST00000543697 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
RAP1B-230ENST00000543697 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
RAP1B-230ENST00000543697 PSEN1P49768 467 aa13.99□□□□□ -0.17
RAP1B-230ENST00000543697 WDR62O43379 1518 aa13.99□□□□□ -0.17
RAP1B-230ENST00000543697 ATAD2BQ9ULI0 1458 aa13.99□□□□□ -0.17
RAP1B-230ENST00000543697 NBR1Q14596 966 aa13.98□□□□□ -0.17
RAP1B-230ENST00000543697 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
RAP1B-230ENST00000543697 HMGXB3Q12766 1538 aa13.96□□□□□ -0.17
RAP1B-230ENST00000543697 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
RAP1B-230ENST00000543697 MRC2Q9UBG0 1479 aa13.95□□□□□ -0.18
RAP1B-230ENST00000543697 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
RAP1B-230ENST00000543697 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
RAP1B-230ENST00000543697 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
RAP1B-230ENST00000543697 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
RAP1B-230ENST00000543697 SOX12O15370 315 aa13.9□□□□□ -0.18
RAP1B-230ENST00000543697 IFNL1Q8IU54 200 aa13.88□□□□□ -0.19
RAP1B-230ENST00000543697 MAP3K13O43283 966 aa13.87□□□□□ -0.19
RAP1B-230ENST00000543697 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
RAP1B-230ENST00000543697 NLRP6P59044 892 aa13.85□□□□□ -0.19
RAP1B-230ENST00000543697 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
RAP1B-230ENST00000543697 MFRPQ9BY79 579 aa13.81□□□□□ -0.2
RAP1B-230ENST00000543697 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
RAP1B-230ENST00000543697 CLCN6P51797 869 aa13.79□□□□□ -0.2
RAP1B-230ENST00000543697 CABP2Q9NPB3 220 aa13.76□□□□□ -0.21
RAP1B-230ENST00000543697 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
RAP1B-230ENST00000543697 EFCAB3Q8N7B9 438 aa13.74□□□□□ -0.21
RAP1B-230ENST00000543697 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
RAP1B-230ENST00000543697 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
RAP1B-230ENST00000543697 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
RAP1B-230ENST00000543697 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
RAP1B-230ENST00000543697 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
RAP1B-230ENST00000543697 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
RAP1B-230ENST00000543697 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
RAP1B-230ENST00000543697 TIE1P35590 1138 aa13.66□□□□□ -0.22
RAP1B-230ENST00000543697 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
RAP1B-230ENST00000543697 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms