RNA–Protein interactions for RNA: ENST00000543382.6

BECN1-203, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 2,504 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-203ENST00000543382 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
BECN1-203ENST00000543382 PCF11O94913 1555 aaKnown RBP24.19■■□□□ 1.46
BECN1-203ENST00000543382 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
BECN1-203ENST00000543382 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
BECN1-203ENST00000543382 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
BECN1-203ENST00000543382 LRRC9Q6ZRR7 1453 aa24.17■■□□□ 1.46
BECN1-203ENST00000543382 CTTNBP2Q8WZ74 1663 aa24.17■■□□□ 1.46
BECN1-203ENST00000543382 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
BECN1-203ENST00000543382 CFAP43Q8NDM7 1665 aa24.12■■□□□ 1.45
BECN1-203ENST00000543382 ITGAEP38570 1179 aa24.12■■□□□ 1.45
BECN1-203ENST00000543382 EFCAB5A4FU69 1503 aa24.11■■□□□ 1.45
BECN1-203ENST00000543382 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
BECN1-203ENST00000543382 PHLDB1Q86UU1 1377 aa24.09■■□□□ 1.45
BECN1-203ENST00000543382 CLSPNQ9HAW4 1339 aa24.08■■□□□ 1.44
BECN1-203ENST00000543382 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.44
BECN1-203ENST00000543382 FYCO1Q9BQS8 1478 aa24.05■■□□□ 1.44
BECN1-203ENST00000543382 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
BECN1-203ENST00000543382 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
BECN1-203ENST00000543382 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
BECN1-203ENST00000543382 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.433e-9■■■■□ 25.8
BECN1-203ENST00000543382 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
BECN1-203ENST00000543382 RAB3GAP2Q9H2M9 1393 aa23.96■■□□□ 1.43
BECN1-203ENST00000543382 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
BECN1-203ENST00000543382 FMN1Q68DA7 1419 aa23.95■■□□□ 1.42
BECN1-203ENST00000543382 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
BECN1-203ENST00000543382 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
BECN1-203ENST00000543382 PBRM1Q86U86 1689 aa23.89■■□□□ 1.42
BECN1-203ENST00000543382 ACIN1Q9UKV3 1341 aaKnown RBP23.89■■□□□ 1.42
BECN1-203ENST00000543382 LRRIQ1Q96JM4 1722 aa23.89■■□□□ 1.41
BECN1-203ENST00000543382 SETD5Q9C0A6 1442 aa23.88■■□□□ 1.41
BECN1-203ENST00000543382 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
BECN1-203ENST00000543382 MAPKBP1O60336 1514 aa23.86■■□□□ 1.41
BECN1-203ENST00000543382 MIER1Q8N108 512 aa23.84■■□□□ 1.41
BECN1-203ENST00000543382 GRIN2BQ13224 1484 aa23.83■■□□□ 1.4
BECN1-203ENST00000543382 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
BECN1-203ENST00000543382 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
BECN1-203ENST00000543382 FGD6Q6ZV73 1430 aa23.77■■□□□ 1.4
BECN1-203ENST00000543382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.76■■□□□ 1.39
BECN1-203ENST00000543382 CENPBP07199 599 aaPredicted RBP23.75■■□□□ 1.39
BECN1-203ENST00000543382 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
BECN1-203ENST00000543382 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
BECN1-203ENST00000543382 IQGAP2Q13576 1575 aa23.73■■□□□ 1.39
BECN1-203ENST00000543382 NCOA2Q15596 1464 aa23.71■■□□□ 1.39
BECN1-203ENST00000543382 WDR62O43379 1518 aa23.7■■□□□ 1.38
BECN1-203ENST00000543382 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
BECN1-203ENST00000543382 MAGI3Q5TCQ9 1506 aa23.68■■□□□ 1.38
BECN1-203ENST00000543382 YTHDC1Q96MU7 727 aaKnown RBP23.68■■□□□ 1.38
BECN1-203ENST00000543382 PTPRKQ15262 1439 aa23.67■■□□□ 1.38
BECN1-203ENST00000543382 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
BECN1-203ENST00000543382 SUPT6HQ7KZ85 1726 aaKnown RBP23.66■■□□□ 1.38
BECN1-203ENST00000543382 SIN3AQ96ST3 1273 aa23.65■■□□□ 1.38
BECN1-203ENST00000543382 MYOM3Q5VTT5 1437 aa23.65■■□□□ 1.38
BECN1-203ENST00000543382 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
BECN1-203ENST00000543382 CCDC18Q5T9S5 1454 aa23.61■■□□□ 1.37
BECN1-203ENST00000543382 HECW1Q76N89 1606 aa23.61■■□□□ 1.37
BECN1-203ENST00000543382 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
BECN1-203ENST00000543382 GTF3C3Q9Y5Q9 886 aa23.6■■□□□ 1.37
BECN1-203ENST00000543382 EPRSP07814 1512 aaKnown RBP23.58■■□□□ 1.37
BECN1-203ENST00000543382 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
BECN1-203ENST00000543382 PTPN23Q9H3S7 1636 aa23.56■■□□□ 1.36
BECN1-203ENST00000543382 CDK13Q14004 1512 aaKnown RBP23.56■■□□□ 1.36
BECN1-203ENST00000543382 HFM1A2PYH4 1435 aa23.56■■□□□ 1.36
BECN1-203ENST00000543382 ARID3CA6NKF2 412 aa23.53■■□□□ 1.36
BECN1-203ENST00000543382 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
BECN1-203ENST00000543382 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.35
BECN1-203ENST00000543382 NAIPQ13075 1403 aa23.51■■□□□ 1.35
BECN1-203ENST00000543382 DISP1Q96F81 1524 aa23.51■■□□□ 1.35
BECN1-203ENST00000543382 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
BECN1-203ENST00000543382 KIAA0556O60303 1618 aa23.49■■□□□ 1.35
BECN1-203ENST00000543382 TCOF1Q13428 1488 aaKnown RBP23.47■■□□□ 1.35
BECN1-203ENST00000543382 UACAQ9BZF9 1416 aa23.46■■□□□ 1.35
BECN1-203ENST00000543382 TIMELESSQ9UNS1 1208 aa23.43■■□□□ 1.34
BECN1-203ENST00000543382 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
BECN1-203ENST00000543382 PPP1R15AO75807 674 aaPredicted RBP23.39■■□□□ 1.34
BECN1-203ENST00000543382 RRP7BPQ9NSQ0 103 aa23.39■■□□□ 1.34
BECN1-203ENST00000543382 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.34
BECN1-203ENST00000543382 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.33
BECN1-203ENST00000543382 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
BECN1-203ENST00000543382 MIA2Q96PC5 1412 aa23.37■■□□□ 1.33
BECN1-203ENST00000543382 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
BECN1-203ENST00000543382 GCC2Q8IWJ2 1684 aa23.35■■□□□ 1.33
BECN1-203ENST00000543382 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
BECN1-203ENST00000543382 SYNJ2O15056 1496 aa23.35■■□□□ 1.33
BECN1-203ENST00000543382 KDM6BO15054 1643 aa23.34■■□□□ 1.33
BECN1-203ENST00000543382 TONSLQ96HA7 1378 aa23.31■■□□□ 1.32
BECN1-203ENST00000543382 FBLN2P98095 1184 aa23.31■■□□□ 1.32
BECN1-203ENST00000543382 HIRIP3Q9BW71 556 aaPredicted RBP23.29■■□□□ 1.32
BECN1-203ENST00000543382 DENND4BO75064 1496 aaPredicted RBP23.29■■□□□ 1.32
BECN1-203ENST00000543382 AKNAQ7Z591 1439 aa23.29■■□□□ 1.32
BECN1-203ENST00000543382 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
BECN1-203ENST00000543382 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
BECN1-203ENST00000543382 ZNF644Q9H582 1327 aaPredicted RBP23.25■■□□□ 1.31
BECN1-203ENST00000543382 NUP160Q12769 1436 aa23.24■■□□□ 1.31
BECN1-203ENST00000543382 KDM5BQ9UGL1 1544 aa23.24■■□□□ 1.31
BECN1-203ENST00000543382 DAPK1P53355 1430 aa23.23■■□□□ 1.31
BECN1-203ENST00000543382 PRG4Q92954 1404 aaPredicted RBP23.23■■□□□ 1.31
BECN1-203ENST00000543382 TRIM52Q96A61 297 aa23.22■■□□□ 1.31
BECN1-203ENST00000543382 KCNH8Q96L42 1107 aa23.21■■□□□ 1.31
BECN1-203ENST00000543382 ABCC5O15440 1437 aa23.2■■□□□ 1.31
BECN1-203ENST00000543382 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms