RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 TSPY10P0CW01 314 aa14.17□□□□□ -0.14
GABRB3-204ENST00000541819 KDM2AQ9Y2K7 1162 aa14.17□□□□□ -0.14
GABRB3-204ENST00000541819 ANP32EQ9BTT0 268 aa14.16□□□□□ -0.14
GABRB3-204ENST00000541819 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
GABRB3-204ENST00000541819 CASC1Q6TDU7 716 aa14.15□□□□□ -0.14
GABRB3-204ENST00000541819 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
GABRB3-204ENST00000541819 MRS2Q9HD23 443 aa14.15□□□□□ -0.14
GABRB3-204ENST00000541819 PTMAP06454 111 aaKnown RBP14.12□□□□□ -0.15
GABRB3-204ENST00000541819 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
GABRB3-204ENST00000541819 NPHP1O15259 732 aa14.09□□□□□ -0.15
GABRB3-204ENST00000541819 CFAP53Q96M91 514 aa14.08□□□□□ -0.16
GABRB3-204ENST00000541819 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-204ENST00000541819 DNTTIP2Q5QJE6 756 aaKnown RBP14.05□□□□□ -0.16
GABRB3-204ENST00000541819 GOLGA6L6A8MZA4 724 aa14.04□□□□□ -0.16
GABRB3-204ENST00000541819 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.16
GABRB3-204ENST00000541819 ARID4BQ4LE39 1312 aaPredicted RBP14.02□□□□□ -0.16
GABRB3-204ENST00000541819 MTUS2Q5JR59 1369 aa14.01□□□□□ -0.17
GABRB3-204ENST00000541819 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
GABRB3-204ENST00000541819 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
GABRB3-204ENST00000541819 IRX6P78412 446 aaPredicted RBP13.99□□□□□ -0.17
GABRB3-204ENST00000541819 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
GABRB3-204ENST00000541819 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
GABRB3-204ENST00000541819 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
GABRB3-204ENST00000541819 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
GABRB3-204ENST00000541819 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
GABRB3-204ENST00000541819 MAPK8IP3Q9UPT6 1336 aa13.96□□□□□ -0.17
GABRB3-204ENST00000541819 CLSTN1O94985 981 aa13.96□□□□□ -0.17
GABRB3-204ENST00000541819 FGD1P98174 961 aa13.95□□□□□ -0.18
GABRB3-204ENST00000541819 NRDCO43847 1150 aa13.95□□□□□ -0.18
GABRB3-204ENST00000541819 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-204ENST00000541819 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
GABRB3-204ENST00000541819 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
GABRB3-204ENST00000541819 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
GABRB3-204ENST00000541819 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
GABRB3-204ENST00000541819 KCNH8Q96L42 1107 aa13.93□□□□□ -0.18
GABRB3-204ENST00000541819 CHMP4BQ9H444 224 aaKnown RBP13.92□□□□□ -0.18
GABRB3-204ENST00000541819 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
GABRB3-204ENST00000541819 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
GABRB3-204ENST00000541819 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
GABRB3-204ENST00000541819 KCNJ4P48050 445 aa13.9□□□□□ -0.18
GABRB3-204ENST00000541819 RGL3Q3MIN7 710 aa13.88□□□□□ -0.19
GABRB3-204ENST00000541819 RRP7BPQ9NSQ0 103 aa13.88□□□□□ -0.19
GABRB3-204ENST00000541819 POGKQ9P215 609 aa13.87□□□□□ -0.19
GABRB3-204ENST00000541819 PLEKHD1A6NEE1 506 aa13.87□□□□□ -0.19
GABRB3-204ENST00000541819 HSP90AB1P08238 724 aaKnown RBP13.87□□□□□ -0.19
GABRB3-204ENST00000541819 L1TD1Q5T7N2 865 aaKnown RBP13.86□□□□□ -0.19
GABRB3-204ENST00000541819 ERICH6BQ5W0A0 696 aa13.86□□□□□ -0.19
GABRB3-204ENST00000541819 NAP1L5Q96NT1 182 aaPredicted RBP13.86□□□□□ -0.19
GABRB3-204ENST00000541819 GOLGA6L4A6NEF3 574 aa13.85□□□□□ -0.19
GABRB3-204ENST00000541819 MS4A1P11836 297 aa13.85□□□□□ -0.19
GABRB3-204ENST00000541819 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-204ENST00000541819 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
GABRB3-204ENST00000541819 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
GABRB3-204ENST00000541819 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-204ENST00000541819 NEUROD2Q15784 382 aa13.84□□□□□ -0.19
GABRB3-204ENST00000541819 CHAF1AQ13111 956 aaPredicted RBP13.82□□□□□ -0.2
GABRB3-204ENST00000541819 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
GABRB3-204ENST00000541819 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-204ENST00000541819 MCCP23508 829 aa13.79□□□□□ -0.2
GABRB3-204ENST00000541819 CARD11Q9BXL7 1154 aa13.79□□□□□ -0.2
GABRB3-204ENST00000541819 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
GABRB3-204ENST00000541819 GNL2Q13823 731 aaKnown RBP13.77□□□□□ -0.2
GABRB3-204ENST00000541819 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.21
GABRB3-204ENST00000541819 RGS3P49796 1198 aa13.77□□□□□ -0.21
GABRB3-204ENST00000541819 DRC7Q8IY82 874 aa13.75□□□□□ -0.21
GABRB3-204ENST00000541819 HSCBQ8IWL3 235 aa13.75□□□□□ -0.21
GABRB3-204ENST00000541819 MIER1Q8N108 512 aa13.74□□□□□ -0.21
GABRB3-204ENST00000541819 PRM3Q9NNZ6 103 aa13.74□□□□□ -0.21
GABRB3-204ENST00000541819 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-204ENST00000541819 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
GABRB3-204ENST00000541819 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
GABRB3-204ENST00000541819 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
GABRB3-204ENST00000541819 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-204ENST00000541819 NOC3LQ8WTT2 800 aaKnown RBP13.71□□□□□ -0.21
GABRB3-204ENST00000541819 CLIP1P30622 1438 aa13.71□□□□□ -0.21
GABRB3-204ENST00000541819 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.22
GABRB3-204ENST00000541819 MSNP26038 577 aaKnown RBP13.71□□□□□ -0.22
GABRB3-204ENST00000541819 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
GABRB3-204ENST00000541819 RTF1Q92541 710 aaKnown RBP13.68□□□□□ -0.22
GABRB3-204ENST00000541819 SUPT16HQ9Y5B9 1047 aaKnown RBP13.68□□□□□ -0.22
GABRB3-204ENST00000541819 KANK1Q14678 1352 aa13.67□□□□□ -0.22
GABRB3-204ENST00000541819 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
GABRB3-204ENST00000541819 PPP4R2Q9NY27 417 aa13.66□□□□□ -0.22
GABRB3-204ENST00000541819 SOX12O15370 315 aa13.65□□□□□ -0.22
GABRB3-204ENST00000541819 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
GABRB3-204ENST00000541819 NOP58Q9Y2X3 529 aaKnown RBP13.65□□□□□ -0.22
GABRB3-204ENST00000541819 TMF1P82094 1093 aa13.64□□□□□ -0.23
GABRB3-204ENST00000541819 HTATSF1O43719 755 aaKnown RBP13.63□□□□□ -0.23
GABRB3-204ENST00000541819 SRPK2P78362 688 aaKnown RBP13.63□□□□□ -0.23
GABRB3-204ENST00000541819 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
GABRB3-204ENST00000541819 TPM4P67936 248 aa13.62□□□□□ -0.23
GABRB3-204ENST00000541819 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
GABRB3-204ENST00000541819 PTMSP20962 102 aa13.61□□□□□ -0.23
GABRB3-204ENST00000541819 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
GABRB3-204ENST00000541819 CSB-PGBD3P0DP91 1061 aa13.6□□□□□ -0.23
GABRB3-204ENST00000541819 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-204ENST00000541819 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-204ENST00000541819 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
GABRB3-204ENST00000541819 MLECQ14165 292 aa13.58□□□□□ -0.24
GABRB3-204ENST00000541819 G3V3G9 751 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms