RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 CECR2Q9BXF3 1484 aa10.28□□□□□ -0.76
PPME1-206ENST00000541340 TRIM52Q96A61 297 aa10.28□□□□□ -0.76
PPME1-206ENST00000541340 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
PPME1-206ENST00000541340 HMGXB3Q12766 1538 aa10.27□□□□□ -0.76
PPME1-206ENST00000541340 TAF7LQ5H9L4 462 aa10.27□□□□□ -0.77
PPME1-206ENST00000541340 WASHC2AQ641Q2 1341 aa10.26□□□□□ -0.77
PPME1-206ENST00000541340 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
PPME1-206ENST00000541340 WASHC2CQ9Y4E1 1318 aa10.25□□□□□ -0.77
PPME1-206ENST00000541340 PRDM2Q13029 1718 aa10.22□□□□□ -0.77
PPME1-206ENST00000541340 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
PPME1-206ENST00000541340 ARXQ96QS3 562 aa10.22□□□□□ -0.77
PPME1-206ENST00000541340 HSP90AA2PQ14568 343 aaPredicted RBP10.15□□□□□ -0.78
PPME1-206ENST00000541340 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.79
PPME1-206ENST00000541340 RRP9O43818 475 aaKnown RBP10.14□□□□□ -0.79
PPME1-206ENST00000541340 NEFMP07197 916 aa10.14□□□□□ -0.79
PPME1-206ENST00000541340 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
PPME1-206ENST00000541340 CEP162Q5TB80 1403 aa10.14□□□□□ -0.79
PPME1-206ENST00000541340 DDX10Q13206 875 aaKnown RBP10.13□□□□□ -0.79
PPME1-206ENST00000541340 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
PPME1-206ENST00000541340 LAMC3Q9Y6N6 1575 aa10.12□□□□□ -0.79
PPME1-206ENST00000541340 IPO9Q96P70 1041 aaKnown RBP10.11□□□□□ -0.79
PPME1-206ENST00000541340 WDR62O43379 1518 aa10.11□□□□□ -0.79
PPME1-206ENST00000541340 HIRIP3Q9BW71 556 aaPredicted RBP10.11□□□□□ -0.79
PPME1-206ENST00000541340 USP35Q9P2H5 1018 aa10.11□□□□□ -0.79
PPME1-206ENST00000541340 RSF1Q96T23 1441 aaPredicted RBP10.1□□□□□ -0.79
PPME1-206ENST00000541340 PRDM4Q9UKN5 801 aa10.09□□□□□ -0.79
PPME1-206ENST00000541340 NAP1L2Q9ULW6 460 aaPredicted RBP10.09□□□□□ -0.79
PPME1-206ENST00000541340 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
PPME1-206ENST00000541340 RSPH4AQ5TD94 716 aa10.08□□□□□ -0.8
PPME1-206ENST00000541340 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
PPME1-206ENST00000541340 NCAPD3P42695 1498 aa10.06□□□□□ -0.8
PPME1-206ENST00000541340 CHMP4BQ9H444 224 aaKnown RBP10.06□□□□□ -0.8
PPME1-206ENST00000541340 KIF21AQ7Z4S6 1674 aa10.05□□□□□ -0.8
PPME1-206ENST00000541340 BBXQ8WY36 941 aaPredicted RBP10.05□□□□□ -0.8
PPME1-206ENST00000541340 GSE1Q14687 1217 aa10.05□□□□□ -0.8
PPME1-206ENST00000541340 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
PPME1-206ENST00000541340 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
PPME1-206ENST00000541340 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
PPME1-206ENST00000541340 RGS3P49796 1198 aa10.03□□□□□ -0.8
PPME1-206ENST00000541340 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
PPME1-206ENST00000541340 GTF2E1P29083 439 aaPredicted RBP10.03□□□□□ -0.8
PPME1-206ENST00000541340 HSP90AA1P07900 732 aaKnown RBP10.03□□□□□ -0.8
PPME1-206ENST00000541340 NAP1L5Q96NT1 182 aaPredicted RBP10.02□□□□□ -0.81
PPME1-206ENST00000541340 CALD1Q05682 793 aaKnown RBP10.01□□□□□ -0.81
PPME1-206ENST00000541340 LAS1LQ9Y4W2 734 aaKnown RBP10.01□□□□□ -0.81
PPME1-206ENST00000541340 CHMP4AQ9BY43 222 aa10□□□□□ -0.81
PPME1-206ENST00000541340 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
PPME1-206ENST00000541340 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
PPME1-206ENST00000541340 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
PPME1-206ENST00000541340 PABPN1Q86U42 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
PPME1-206ENST00000541340 WDR97A6NE52 1622 aa9.98□□□□□ -0.81
PPME1-206ENST00000541340 RRAGDQ9NQL2 400 aaPredicted RBP9.98□□□□□ -0.81
PPME1-206ENST00000541340 ZNF326Q5BKZ1 582 aaKnown RBP9.97□□□□□ -0.81
PPME1-206ENST00000541340 DCAF11Q8TEB1 546 aa9.97□□□□□ -0.81
PPME1-206ENST00000541340 IPO4Q8TEX9 1081 aaKnown RBP9.97□□□□□ -0.81
PPME1-206ENST00000541340 FRAT1Q92837 279 aaPredicted RBP9.97□□□□□ -0.81
PPME1-206ENST00000541340 PPP4R2Q9NY27 417 aa9.97□□□□□ -0.81
PPME1-206ENST00000541340 BAZ1BQ9UIG0 1483 aaKnown RBP9.97□□□□□ -0.81
PPME1-206ENST00000541340 STAC3Q96MF2 364 aa9.97□□□□□ -0.81
PPME1-206ENST00000541340 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
PPME1-206ENST00000541340 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.81
PPME1-206ENST00000541340 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.81
PPME1-206ENST00000541340 SOGA1O94964 1423 aa9.95□□□□□ -0.82
PPME1-206ENST00000541340 CENPJQ9HC77 1338 aaPredicted RBP9.94□□□□□ -0.82
PPME1-206ENST00000541340 CCDC88BA6NC98 1476 aa9.93□□□□□ -0.82
PPME1-206ENST00000541340 PPP1R15AO75807 674 aaPredicted RBP9.93□□□□□ -0.82
PPME1-206ENST00000541340 PPM1GO15355 546 aaPredicted RBP9.93□□□□□ -0.82
PPME1-206ENST00000541340 CANXP27824 592 aaKnown RBP9.93□□□□□ -0.82
PPME1-206ENST00000541340 FOXD1Q16676 465 aa9.93□□□□□ -0.82
PPME1-206ENST00000541340 RUSC2Q8N2Y8 1516 aa9.92□□□□□ -0.82
PPME1-206ENST00000541340 NPM2Q86SE8 214 aaKnown RBP9.92□□□□□ -0.82
PPME1-206ENST00000541340 TNIKQ9UKE5 1360 aa9.91□□□□□ -0.82
PPME1-206ENST00000541340 RIMBP3CA6NJZ7 1639 aa9.91□□□□□ -0.82
PPME1-206ENST00000541340 RIMBP3BA6NNM3 1639 aa9.91□□□□□ -0.82
PPME1-206ENST00000541340 RIMBP3Q9UFD9 1639 aa9.91□□□□□ -0.82
PPME1-206ENST00000541340 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.83
PPME1-206ENST00000541340 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
PPME1-206ENST00000541340 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
PPME1-206ENST00000541340 ANP32CO43423 234 aa9.88□□□□□ -0.83
PPME1-206ENST00000541340 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
PPME1-206ENST00000541340 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
PPME1-206ENST00000541340 PNNQ9H307 717 aaKnown RBP9.88□□□□□ -0.83
PPME1-206ENST00000541340 PLPPR3Q6T4P5 718 aa9.87□□□□□ -0.83
PPME1-206ENST00000541340 CNGB1Q14028 1251 aaPredicted RBP9.87□□□□□ -0.83
PPME1-206ENST00000541340 WIZO95785 1651 aa9.86□□□□□ -0.83
PPME1-206ENST00000541340 NFKBIBQ15653 356 aa9.85□□□□□ -0.83
PPME1-206ENST00000541340 CCDC184Q52MB2 194 aa9.85□□□□□ -0.83
PPME1-206ENST00000541340 CCER2I3L3R5 266 aa9.84□□□□□ -0.83
PPME1-206ENST00000541340 HAP1P54257 671 aaPredicted RBP9.84□□□□□ -0.83
PPME1-206ENST00000541340 FTSJ3Q8IY81 847 aaKnown RBP9.83□□□□□ -0.84
PPME1-206ENST00000541340 TULP1O00294 542 aaPredicted RBP9.83□□□□□ -0.84
PPME1-206ENST00000541340 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
PPME1-206ENST00000541340 CLCN1P35523 988 aa9.82□□□□□ -0.84
PPME1-206ENST00000541340 SECISBP2LQ93073 1101 aaKnown RBP9.82□□□□□ -0.84
PPME1-206ENST00000541340 HOMEZQ8IX15 550 aa9.82□□□□□ -0.84
PPME1-206ENST00000541340 ZNF830Q96NB3 372 aaPredicted RBP9.82□□□□□ -0.84
PPME1-206ENST00000541340 CLIP1P30622 1438 aa9.82□□□□□ -0.84
PPME1-206ENST00000541340 TEX2Q8IWB9 1127 aa9.82□□□□□ -0.84
PPME1-206ENST00000541340 ARID4BQ4LE39 1312 aaPredicted RBP9.81□□□□□ -0.84
PPME1-206ENST00000541340 SMARCA4P51532 1647 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms