RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	CYB5RL	Q6IPT4	315 aa		33.7	■■■□□ 2.99
RAP1B-223	ENST00000541167	ERCC6L2	Q5T890	1561 aa		33.69	■■■□□ 2.98
RAP1B-223	ENST00000541167	KIAA0586	Q9BVV6	1533 aa		33.69	■■■□□ 2.98
RAP1B-223	ENST00000541167	EEA1	Q15075	1411 aa		33.62	■■■□□ 2.97
RAP1B-223	ENST00000541167	JPH4	Q96JJ6	628 aa		33.62	■■■□□ 2.97
RAP1B-223	ENST00000541167	PRG4	Q92954	1404 aa	Predicted RBP	33.6	■■■□□ 2.97
RAP1B-223	ENST00000541167	PRX	Q9BXM0	1461 aa		33.59	■■■□□ 2.97
RAP1B-223	ENST00000541167	IQGAP2	Q13576	1575 aa		33.55	■■■□□ 2.96
RAP1B-223	ENST00000541167	CSRNP3	Q8WYN3	585 aa		33.54	■■■□□ 2.96
RAP1B-223	ENST00000541167	CTTNBP2	Q8WZ74	1663 aa		33.52	■■■□□ 2.96
RAP1B-223	ENST00000541167	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.49	■■■□□ 2.95
RAP1B-223	ENST00000541167	UGGT2	Q9NYU1	1516 aa		33.34	■■■□□ 2.93
RAP1B-223	ENST00000541167	CARMIL2	Q6F5E8	1435 aa		33.34	■■■□□ 2.93
RAP1B-223	ENST00000541167	KIF21B	O75037	1637 aa		33.32	■■■□□ 2.92
RAP1B-223	ENST00000541167	DISP1	Q96F81	1524 aa		33.28	■■■□□ 2.92
RAP1B-223	ENST00000541167	TRH	P20396	242 aa	Predicted RBP	33.25	■■■□□ 2.91
RAP1B-223	ENST00000541167	KIAA0556	O60303	1618 aa		33.24	■■■□□ 2.91
RAP1B-223	ENST00000541167	TNIK	Q9UKE5	1360 aa		33.21	■■■□□ 2.91
RAP1B-223	ENST00000541167	PTPRG	P23470	1445 aa		33.19	■■■□□ 2.9
RAP1B-223	ENST00000541167	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.18	■■■□□ 2.9
RAP1B-223	ENST00000541167	GOLGA3	Q08378	1498 aa		33.17	■■■□□ 2.9
RAP1B-223	ENST00000541167	ADCY10	Q96PN6	1610 aa		33.14	■■■□□ 2.9
RAP1B-223	ENST00000541167	EHMT2	Q96KQ7	1210 aa		33.08	■■■□□ 2.89
RAP1B-223	ENST00000541167	SAMD9	Q5K651	1589 aa		33.02	■■■□□ 2.88
RAP1B-223	ENST00000541167	UBTF	P17480	764 aa	Known RBP	32.99	■■■□□ 2.87
RAP1B-223	ENST00000541167	NPM1	P06748	294 aa	Known RBP eCLIP	32.98	■■■□□ 2.87
RAP1B-223	ENST00000541167	UACA	Q9BZF9	1416 aa		32.98	■■■□□ 2.87
RAP1B-223	ENST00000541167	RANGAP1	P46060	587 aa	Predicted RBP	32.96	■■■□□ 2.87
RAP1B-223	ENST00000541167	UHRF1BP1L	A0JNW5	1464 aa		32.95	■■■□□ 2.87
RAP1B-223	ENST00000541167	ABCC2	Q92887	1545 aa		32.95	■■■□□ 2.87
RAP1B-223	ENST00000541167	P3H3	Q8IVL6	736 aa		32.93	■■■□□ 2.86
RAP1B-223	ENST00000541167	MAPKBP1	O60336	1514 aa		32.91	■■■□□ 2.86
RAP1B-223	ENST00000541167	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.89	■■■□□ 2.86
RAP1B-223	ENST00000541167	EFCAB5	A4FU69	1503 aa		32.87	■■■□□ 2.85
RAP1B-223	ENST00000541167	PLB1	Q6P1J6	1458 aa		32.87	■■■□□ 2.85
RAP1B-223	ENST00000541167	ABCA8	O94911	1581 aa		32.86	■■■□□ 2.85
RAP1B-223	ENST00000541167	KIF13A	Q9H1H9	1805 aa		32.81	■■■□□ 2.84
RAP1B-223	ENST00000541167	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.8	■■■□□ 2.84
RAP1B-223	ENST00000541167	FHOD3	Q2V2M9	1422 aa		32.8	■■■□□ 2.84
RAP1B-223	ENST00000541167	KDM5B	Q9UGL1	1544 aa		32.79	■■■□□ 2.84
RAP1B-223	ENST00000541167	DIP2B	Q9P265	1576 aa		32.73	■■■□□ 2.83
RAP1B-223	ENST00000541167	ABCC10	Q5T3U5	1492 aa		32.73	■■■□□ 2.83
RAP1B-223	ENST00000541167	RAPGEF6	Q8TEU7	1601 aa		32.73	■■■□□ 2.83
RAP1B-223	ENST00000541167	ASXL2	Q76L83	1435 aa		32.7	■■■□□ 2.83
RAP1B-223	ENST00000541167	ARHGAP35	Q9NRY4	1499 aa		32.68	■■■□□ 2.82
RAP1B-223	ENST00000541167	FAM69C	Q0P6D2	419 aa		32.64	■■■□□ 2.82
RAP1B-223	ENST00000541167	ARID3C	A6NKF2	412 aa		32.58	■■■□□ 2.81
RAP1B-223	ENST00000541167	WDR7	Q9Y4E6	1490 aa		32.55	■■■□□ 2.8
RAP1B-223	ENST00000541167	ATP10B	O94823	1461 aa		32.54	■■■□□ 2.8
RAP1B-223	ENST00000541167	NUP153	P49790	1475 aa	Known RBP	32.54	■■■□□ 2.8
RAP1B-223	ENST00000541167	FMN1	Q68DA7	1419 aa		32.53	■■■□□ 2.8
RAP1B-223	ENST00000541167	GLI2	P10070	1586 aa		32.53	■■■□□ 2.8
RAP1B-223	ENST00000541167	TSPOAP1	O95153	1857 aa		32.52	■■■□□ 2.8
RAP1B-223	ENST00000541167	EPRS	P07814	1512 aa	Known RBP	32.51	■■■□□ 2.8
RAP1B-223	ENST00000541167	CLIP1	P30622	1438 aa		32.49	■■■□□ 2.79
RAP1B-223	ENST00000541167	HECW1	Q76N89	1606 aa		32.44	■■■□□ 2.78
RAP1B-223	ENST00000541167	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.44	■■■□□ 2.78
RAP1B-223	ENST00000541167	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.44	■■■□□ 2.78
RAP1B-223	ENST00000541167	MAP3K4	Q9Y6R4	1608 aa		32.41	■■■□□ 2.78
RAP1B-223	ENST00000541167	LOC105371045	A0A1W2PR82	267 aa		32.38	■■■□□ 2.77
RAP1B-223	ENST00000541167	KCNH8	Q96L42	1107 aa		32.38	■■■□□ 2.77
RAP1B-223	ENST00000541167	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.37	■■■□□ 2.77
RAP1B-223	ENST00000541167	PPRC1	Q5VV67	1664 aa	Known RBP	32.37	■■■□□ 2.77
RAP1B-223	ENST00000541167	PCF11	O94913	1555 aa	Known RBP	32.36	■■■□□ 2.77
RAP1B-223	ENST00000541167	CDK13	Q14004	1512 aa	Known RBP	32.36	■■■□□ 2.77
RAP1B-223	ENST00000541167	CEP162	Q5TB80	1403 aa		32.35	■■■□□ 2.77
RAP1B-223	ENST00000541167	CFAP43	Q8NDM7	1665 aa		32.34	■■■□□ 2.77
RAP1B-223	ENST00000541167	LRRIQ1	Q96JM4	1722 aa		32.3	■■■□□ 2.76
RAP1B-223	ENST00000541167	CASKIN1	Q8WXD9	1431 aa		32.27	■■■□□ 2.76
RAP1B-223	ENST00000541167	PLEKHD1	A6NEE1	506 aa		32.25	■■■□□ 2.75
RAP1B-223	ENST00000541167	ABCA9	Q8IUA7	1624 aa		32.24	■■■□□ 2.75
RAP1B-223	ENST00000541167	TEX14	Q8IWB6	1497 aa		32.23	■■■□□ 2.75
RAP1B-223	ENST00000541167	CD109	Q6YHK3	1445 aa		32.23	■■■□□ 2.75
RAP1B-223	ENST00000541167	FYCO1	Q9BQS8	1478 aa		32.23	■■■□□ 2.75
RAP1B-223	ENST00000541167	KDM6B	O15054	1643 aa		32.22	■■■□□ 2.75
RAP1B-223	ENST00000541167	CCDC18	Q5T9S5	1454 aa		32.18	■■■□□ 2.74
RAP1B-223	ENST00000541167	MAGI3	Q5TCQ9	1506 aa		32.17	■■■□□ 2.74
RAP1B-223	ENST00000541167	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.13	■■■□□ 2.73
RAP1B-223	ENST00000541167	TTC37	Q6PGP7	1564 aa		32.09	■■■□□ 2.73
RAP1B-223	ENST00000541167	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.09	■■■□□ 2.73	8e-7	■■□□□ 12.8
RAP1B-223	ENST00000541167	TRO	Q12816	1431 aa	Predicted RBP	32.07	■■■□□ 2.72
RAP1B-223	ENST00000541167	KIF14	Q15058	1648 aa		32.06	■■■□□ 2.72
RAP1B-223	ENST00000541167	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.97	■■■□□ 2.71
RAP1B-223	ENST00000541167	MYO5C	Q9NQX4	1742 aa		31.97	■■■□□ 2.71
RAP1B-223	ENST00000541167	VPS8	Q8N3P4	1428 aa		31.96	■■■□□ 2.71
RAP1B-223	ENST00000541167	NEO1	Q92859	1461 aa		31.94	■■■□□ 2.7
RAP1B-223	ENST00000541167	CFAP74	Q9C0B2	1584 aa		31.94	■■■□□ 2.7
RAP1B-223	ENST00000541167	PHLDB1	Q86UU1	1377 aa		31.9	■■■□□ 2.7
RAP1B-223	ENST00000541167	FANCA	O15360	1455 aa		31.89	■■■□□ 2.7
RAP1B-223	ENST00000541167	ARAP3	Q8WWN8	1544 aa		31.89	■■■□□ 2.7
RAP1B-223	ENST00000541167	PLCH2	O75038	1416 aa		31.86	■■■□□ 2.69
RAP1B-223	ENST00000541167	MTUS2	Q5JR59	1369 aa		31.83	■■■□□ 2.69
RAP1B-223	ENST00000541167	AKNA	Q7Z591	1439 aa		31.82	■■■□□ 2.68
RAP1B-223	ENST00000541167	EHBP1L1	Q8N3D4	1523 aa		31.81	■■■□□ 2.68
RAP1B-223	ENST00000541167	TIAM1	Q13009	1591 aa		31.81	■■■□□ 2.68
RAP1B-223	ENST00000541167	PREX2	Q70Z35	1606 aa		31.8	■■■□□ 2.68
RAP1B-223	ENST00000541167	ARHGAP5	Q13017	1502 aa		31.8	■■■□□ 2.68
RAP1B-223	ENST00000541167	CDC42BPB	Q9Y5S2	1711 aa		31.79	■■■□□ 2.68
RAP1B-223	ENST00000541167	CDC42BPA	Q5VT25	1732 aa		31.78	■■■□□ 2.68
RAP1B-223	ENST00000541167	FRMPD1	Q5SYB0	1578 aa		31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms