RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-218ENST00000540708 ADAMTS12P58397 1594 aa38.74■■■■□ 3.79
ARL6IP4-218ENST00000540708 PPARGC1BQ86YN6 1023 aaKnown RBP38.7■■■■□ 3.79
ARL6IP4-218ENST00000540708 SNAPC4Q5SXM2 1469 aa38.58■■■■□ 3.77
ARL6IP4-218ENST00000540708 EFCAB5A4FU69 1503 aa38.55■■■■□ 3.76
ARL6IP4-218ENST00000540708 APLP2Q06481 763 aa38.54■■■■□ 3.76
ARL6IP4-218ENST00000540708 MAGI1Q96QZ7 1491 aaPredicted RBP38.52■■■■□ 3.76
ARL6IP4-218ENST00000540708 GRIN2AQ12879 1464 aa38.38■■■■□ 3.74
ARL6IP4-218ENST00000540708 TTBK1Q5TCY1 1321 aaPredicted RBP38.38■■■■□ 3.73
ARL6IP4-218ENST00000540708 SYNJ2O15056 1496 aa38.37■■■■□ 3.73
ARL6IP4-218ENST00000540708 IQGAP2Q13576 1575 aa38.35■■■■□ 3.73
ARL6IP4-218ENST00000540708 SAMD9Q5K651 1589 aa38.35■■■■□ 3.73
ARL6IP4-218ENST00000540708 P3H3Q8IVL6 736 aa38.34■■■■□ 3.73
ARL6IP4-218ENST00000540708 FHOD3Q2V2M9 1422 aa38.33■■■■□ 3.73
ARL6IP4-218ENST00000540708 CHMP7Q8WUX9 453 aaPredicted RBP38.29■■■■□ 3.72
ARL6IP4-218ENST00000540708 KIAA0586Q9BVV6 1533 aa38.25■■■■□ 3.71
ARL6IP4-218ENST00000540708 FMN1Q68DA7 1419 aa38.21■■■■□ 3.71
ARL6IP4-218ENST00000540708 MAP3K1Q13233 1512 aa38.18■■■■□ 3.7
ARL6IP4-218ENST00000540708 PCF11O94913 1555 aaKnown RBP38.18■■■■□ 3.7
ARL6IP4-218ENST00000540708 UGGT2Q9NYU1 1516 aa38.17■■■■□ 3.7
ARL6IP4-218ENST00000540708 FBLN2P98095 1184 aa38.16■■■■□ 3.7
ARL6IP4-218ENST00000540708 FYCO1Q9BQS8 1478 aa38.14■■■■□ 3.7
ARL6IP4-218ENST00000540708 CASKIN1Q8WXD9 1431 aa38.14■■■■□ 3.7
ARL6IP4-218ENST00000540708 CEP170Q5SW79 1584 aa38.12■■■■□ 3.69
ARL6IP4-218ENST00000540708 TIAM1Q13009 1591 aa38.11■■■■□ 3.69
ARL6IP4-218ENST00000540708 NUP160Q12769 1436 aa38.09■■■■□ 3.69
ARL6IP4-218ENST00000540708 KANK4Q5T7N3 995 aaPredicted RBP38.09■■■■□ 3.69
ARL6IP4-218ENST00000540708 CFAP43Q8NDM7 1665 aa38.01■■■■□ 3.68
ARL6IP4-218ENST00000540708 ATP1B4Q9UN42 357 aaPredicted RBP37.99■■■■□ 3.67
ARL6IP4-218ENST00000540708 KIAA0556O60303 1618 aa37.95■■■■□ 3.67
ARL6IP4-218ENST00000540708 DISP1Q96F81 1524 aa37.94■■■■□ 3.66
ARL6IP4-218ENST00000540708 LRRC9Q6ZRR7 1453 aa37.93■■■■□ 3.66
ARL6IP4-218ENST00000540708 HRCP23327 699 aa37.91■■■■□ 3.66
ARL6IP4-218ENST00000540708 CHD1O14646 1710 aa37.88■■■■□ 3.65
ARL6IP4-218ENST00000540708 JPH4Q96JJ6 628 aa37.83■■■■□ 3.65
ARL6IP4-218ENST00000540708 CARMIL2Q6F5E8 1435 aa37.79■■■■□ 3.64
ARL6IP4-218ENST00000540708 HECW1Q76N89 1606 aa37.79■■■■□ 3.64
ARL6IP4-218ENST00000540708 LRRIQ1Q96JM4 1722 aa37.76■■■■□ 3.64
ARL6IP4-218ENST00000540708 CCDC18Q5T9S5 1454 aa37.74■■■■□ 3.63
ARL6IP4-218ENST00000540708 RRBP1Q9P2E9 1410 aaKnown RBP37.73■■■■□ 3.63
ARL6IP4-218ENST00000540708 MTUS2Q5JR59 1369 aa37.65■■■■□ 3.62
ARL6IP4-218ENST00000540708 EPRSP07814 1512 aaKnown RBP37.62■■■■□ 3.61
ARL6IP4-218ENST00000540708 CCNB3Q8WWL7 1395 aa37.61■■■■□ 3.61
ARL6IP4-218ENST00000540708 RAPGEF6Q8TEU7 1601 aa37.61■■■■□ 3.61
ARL6IP4-218ENST00000540708 HNRNPUL2Q1KMD3 747 aaKnown RBP37.59■■■■□ 3.61
ARL6IP4-218ENST00000540708 PHLDB1Q86UU1 1377 aa37.58■■■■□ 3.61
ARL6IP4-218ENST00000540708 EHBP1L1Q8N3D4 1523 aa37.58■■■■□ 3.61
ARL6IP4-218ENST00000540708 PRG4Q92954 1404 aaPredicted RBP37.56■■■■□ 3.6
ARL6IP4-218ENST00000540708 SHROOM2Q13796 1616 aa37.54■■■■□ 3.6
ARL6IP4-218ENST00000540708 NUP153P49790 1475 aaKnown RBP37.51■■■■□ 3.6
ARL6IP4-218ENST00000540708 CDK13Q14004 1512 aaKnown RBP37.5■■■■□ 3.59
ARL6IP4-218ENST00000540708 SUPT6HQ7KZ85 1726 aaKnown RBP37.48■■■■□ 3.59
ARL6IP4-218ENST00000540708 MAGI3Q5TCQ9 1506 aa37.46■■■■□ 3.59
ARL6IP4-218ENST00000540708 ZEB1P37275 1124 aaPredicted RBP37.46■■■■□ 3.59
ARL6IP4-218ENST00000540708 PLB1Q6P1J6 1458 aa37.45■■■■□ 3.59
ARL6IP4-218ENST00000540708 CLASP1Q7Z460 1538 aa37.45■■■■□ 3.59
ARL6IP4-218ENST00000540708 NCOA2Q15596 1464 aa37.42■■■■□ 3.58
ARL6IP4-218ENST00000540708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.42■■■■□ 3.58
ARL6IP4-218ENST00000540708 ARID3CA6NKF2 412 aa37.39■■■■□ 3.58
ARL6IP4-218ENST00000540708 ABCA8O94911 1581 aa37.38■■■■□ 3.58
ARL6IP4-218ENST00000540708 PTPRGP23470 1445 aa37.37■■■■□ 3.57
ARL6IP4-218ENST00000540708 CCER1Q8TC90 406 aaPredicted RBP37.36■■■■□ 3.57
ARL6IP4-218ENST00000540708 ARHGEF11O15085 1522 aa37.35■■■■□ 3.57
ARL6IP4-218ENST00000540708 CDK11AQ9UQ88 783 aaPredicted RBP37.34■■■■□ 3.57
ARL6IP4-218ENST00000540708 FGD6Q6ZV73 1430 aa37.32■■■■□ 3.57
ARL6IP4-218ENST00000540708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.32■■■■□ 3.56
ARL6IP4-218ENST00000540708 MYOM3Q5VTT5 1437 aa37.3■■■■□ 3.56
ARL6IP4-218ENST00000540708 FAM50AQ14320 339 aaKnown RBP37.29■■■■□ 3.56
ARL6IP4-218ENST00000540708 ERCC6L2Q5T890 1561 aa37.23■■■■□ 3.55
ARL6IP4-218ENST00000540708 ITGAEP38570 1179 aa37.22■■■■□ 3.55
ARL6IP4-218ENST00000540708 TROQ12816 1431 aaPredicted RBP37.18■■■■□ 3.54
ARL6IP4-218ENST00000540708 ATP10BO94823 1461 aa37.16■■■■□ 3.54
ARL6IP4-218ENST00000540708 UACAQ9BZF9 1416 aa37.15■■■■□ 3.54
ARL6IP4-218ENST00000540708 PTPN23Q9H3S7 1636 aa37.11■■■■□ 3.53
ARL6IP4-218ENST00000540708 MIA2Q96PC5 1412 aa37.09■■■■□ 3.53
ARL6IP4-218ENST00000540708 ADCY10Q96PN6 1610 aa37.07■■■■□ 3.53
ARL6IP4-218ENST00000540708 PLEKHD1A6NEE1 506 aa37.06■■■■□ 3.52
ARL6IP4-218ENST00000540708 TCOF1Q13428 1488 aaKnown RBP37.06■■■■□ 3.52
ARL6IP4-218ENST00000540708 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
ARL6IP4-218ENST00000540708 ABCC2Q92887 1545 aa37.03■■■■□ 3.52
ARL6IP4-218ENST00000540708 SETD5Q9C0A6 1442 aa36.96■■■■□ 3.51
ARL6IP4-218ENST00000540708 KIF14Q15058 1648 aa36.96■■■■□ 3.51
ARL6IP4-218ENST00000540708 UHRF1BP1LA0JNW5 1464 aa36.94■■■■□ 3.5
ARL6IP4-218ENST00000540708 ITSN2Q9NZM3 1697 aa36.92■■■■□ 3.5
ARL6IP4-218ENST00000540708 RAB3GAP2Q9H2M9 1393 aa36.91■■■■□ 3.5
ARL6IP4-218ENST00000540708 PTPRKQ15262 1439 aa36.87■■■■□ 3.49
ARL6IP4-218ENST00000540708 GPATCH8Q9UKJ3 1502 aaKnown RBP36.86■■■■□ 3.49
ARL6IP4-218ENST00000540708 DHX57Q6P158 1386 aaKnown RBP36.85■■■■□ 3.49
ARL6IP4-218ENST00000540708 ABCC10Q5T3U5 1492 aa36.83■■■■□ 3.49
ARL6IP4-218ENST00000540708 CLSPNQ9HAW4 1339 aa36.8■■■■□ 3.48
ARL6IP4-218ENST00000540708 CFDP1Q9UEE9 299 aaPredicted RBP36.79■■■■□ 3.48
ARL6IP4-218ENST00000540708 KDM5BQ9UGL1 1544 aa36.78■■■■□ 3.48
ARL6IP4-218ENST00000540708 HFM1A2PYH4 1435 aa36.77■■■■□ 3.48
ARL6IP4-218ENST00000540708 ZCCHC11Q5TAX3 1644 aaKnown RBP36.76■■■■□ 3.47
ARL6IP4-218ENST00000540708 CDC42BPAQ5VT25 1732 aa36.73■■■■□ 3.47
ARL6IP4-218ENST00000540708 CAMSAP2Q08AD1 1489 aa36.71■■■■□ 3.47
ARL6IP4-218ENST00000540708 DNMT1P26358 1616 aaKnown RBP36.71■■■■□ 3.47
ARL6IP4-218ENST00000540708 ZNF644Q9H582 1327 aaPredicted RBP36.7■■■■□ 3.47
ARL6IP4-218ENST00000540708 DAPK1P53355 1430 aa36.69■■■■□ 3.46
ARL6IP4-218ENST00000540708 AKNAQ7Z591 1439 aa36.68■■■■□ 3.46
ARL6IP4-218ENST00000540708 NAIPQ13075 1403 aa36.67■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms