RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 JPH4Q96JJ6 628 aa36.18■■■■□ 3.38
CHFR-217ENST00000540537 PRG4Q92954 1404 aaPredicted RBP36.17■■■■□ 3.38
CHFR-217ENST00000540537 CARMIL1Q5VZK9 1371 aa36.1■■■■□ 3.37
CHFR-217ENST00000540537 KIAA0586Q9BVV6 1533 aa36.09■■■■□ 3.37
CHFR-217ENST00000540537 RAPGEF2Q9Y4G8 1499 aa35.82■■■■□ 3.32
CHFR-217ENST00000540537 IQGAP2Q13576 1575 aa35.81■■■■□ 3.32
CHFR-217ENST00000540537 ADCY10Q96PN6 1610 aa35.72■■■■□ 3.31
CHFR-217ENST00000540537 CARMIL2Q6F5E8 1435 aa35.72■■■■□ 3.31
CHFR-217ENST00000540537 PTPRGP23470 1445 aa35.66■■■■□ 3.3
CHFR-217ENST00000540537 NPM1P06748 294 aaKnown RBP eCLIP35.66■■■■□ 3.3
CHFR-217ENST00000540537 TNIKQ9UKE5 1360 aa35.65■■■■□ 3.3
CHFR-217ENST00000540537 MAPKBP1O60336 1514 aa35.63■■■■□ 3.29
CHFR-217ENST00000540537 KIF13AQ9H1H9 1805 aa35.62■■■■□ 3.29
CHFR-217ENST00000540537 UGGT2Q9NYU1 1516 aa35.6■■■■□ 3.29
CHFR-217ENST00000540537 DISP1Q96F81 1524 aa35.59■■■■□ 3.29
CHFR-217ENST00000540537 PRXQ9BXM0 1461 aa35.56■■■■□ 3.28
CHFR-217ENST00000540537 ABCC10Q5T3U5 1492 aa35.53■■■■□ 3.28
CHFR-217ENST00000540537 CTTNBP2Q8WZ74 1663 aa35.52■■■■□ 3.28
CHFR-217ENST00000540537 TTBK1Q5TCY1 1321 aaPredicted RBP35.51■■■■□ 3.27
CHFR-217ENST00000540537 KIAA0556O60303 1618 aa35.47■■■■□ 3.27
CHFR-217ENST00000540537 DIP2BQ9P265 1576 aa35.46■■■■□ 3.27
CHFR-217ENST00000540537 UHRF1BP1LA0JNW5 1464 aa35.45■■■■□ 3.27
CHFR-217ENST00000540537 ABCC2Q92887 1545 aa35.45■■■■□ 3.27
CHFR-217ENST00000540537 FAM69CQ0P6D2 419 aa35.44■■■■□ 3.26
CHFR-217ENST00000540537 UACAQ9BZF9 1416 aa35.42■■■■□ 3.26
CHFR-217ENST00000540537 CSRNP3Q8WYN3 585 aa35.35■■■■□ 3.25
CHFR-217ENST00000540537 GOLGA3Q08378 1498 aa35.35■■■■□ 3.25
CHFR-217ENST00000540537 EEA1Q15075 1411 aa35.33■■■■□ 3.25
CHFR-217ENST00000540537 ASXL2Q76L83 1435 aa35.27■■■■□ 3.24
CHFR-217ENST00000540537 PLB1Q6P1J6 1458 aa35.27■■■■□ 3.24
CHFR-217ENST00000540537 KDM5BQ9UGL1 1544 aa35.27■■■■□ 3.24
CHFR-217ENST00000540537 ZCCHC11Q5TAX3 1644 aaKnown RBP35.18■■■■□ 3.22
CHFR-217ENST00000540537 GLI2P10070 1586 aa35.16■■■■□ 3.22
CHFR-217ENST00000540537 TSPOAP1O95153 1857 aa35.16■■■■□ 3.22
CHFR-217ENST00000540537 ABCA8O94911 1581 aa35.13■■■■□ 3.21
CHFR-217ENST00000540537 EPRSP07814 1512 aaKnown RBP35.06■■■■□ 3.2
CHFR-217ENST00000540537 FAM9AQ8IZU1 332 aaPredicted RBP35.05■■■■□ 3.2
CHFR-217ENST00000540537 SAMD9Q5K651 1589 aa35.04■■■■□ 3.2
CHFR-217ENST00000540537 KDM6BO15054 1643 aa35.03■■■■□ 3.2
CHFR-217ENST00000540537 CHIC1Q5VXU3 224 aa35.02■■■■□ 3.2
CHFR-217ENST00000540537 KIF21BO75037 1637 aa35.01■■■■□ 3.19
CHFR-217ENST00000540537 WDR7Q9Y4E6 1490 aa35.01■■■■□ 3.19
CHFR-217ENST00000540537 PPRC1Q5VV67 1664 aaKnown RBP35■■■■□ 3.19
CHFR-217ENST00000540537 P3H3Q8IVL6 736 aa34.98■■■■□ 3.19
CHFR-217ENST00000540537 MAP3K4Q9Y6R4 1608 aa34.96■■■■□ 3.19
CHFR-217ENST00000540537 AEBP2Q6ZN18 517 aaPredicted RBP34.86■■■■□ 3.17
CHFR-217ENST00000540537 TEX14Q8IWB6 1497 aa34.85■■■■□ 3.17
CHFR-217ENST00000540537 RAPGEF6Q8TEU7 1601 aa34.82■■■■□ 3.16
CHFR-217ENST00000540537 ATP10BO94823 1461 aa34.81■■■■□ 3.16
CHFR-217ENST00000540537 RANGAP1P46060 587 aaPredicted RBP34.79■■■■□ 3.16
CHFR-217ENST00000540537 CFAP43Q8NDM7 1665 aa34.79■■■■□ 3.16
CHFR-217ENST00000540537 EFCAB5A4FU69 1503 aa34.78■■■■□ 3.16
CHFR-217ENST00000540537 FHOD3Q2V2M9 1422 aa34.78■■■■□ 3.16
CHFR-217ENST00000540537 KCNH8Q96L42 1107 aa34.76■■■■□ 3.16
CHFR-217ENST00000540537 ARID3CA6NKF2 412 aa34.74■■■■□ 3.15
CHFR-217ENST00000540537 CD109Q6YHK3 1445 aa34.73■■■■□ 3.15
CHFR-217ENST00000540537 MAGI3Q5TCQ9 1506 aa34.72■■■■□ 3.15
CHFR-217ENST00000540537 COL17A1Q9UMD9 1497 aaPredicted RBP34.7■■■■□ 3.15
CHFR-217ENST00000540537 NUP153P49790 1475 aaKnown RBP34.69■■■■□ 3.14
CHFR-217ENST00000540537 UBTFP17480 764 aaKnown RBP34.66■■■■□ 3.14
CHFR-217ENST00000540537 EHMT2Q96KQ7 1210 aa34.61■■■■□ 3.13
CHFR-217ENST00000540537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.58■■■■□ 3.13
CHFR-217ENST00000540537 HNRNPUL2Q1KMD3 747 aaKnown RBP34.58■■■■□ 3.13
CHFR-217ENST00000540537 ABCA9Q8IUA7 1624 aa34.58■■■■□ 3.13
CHFR-217ENST00000540537 ARHGAP35Q9NRY4 1499 aa34.5■■■■□ 3.11
CHFR-217ENST00000540537 KDM4FA0A1W2PPD8 638 aa34.48■■■■□ 3.11
CHFR-217ENST00000540537 FMN1Q68DA7 1419 aa34.46■■■■□ 3.11
CHFR-217ENST00000540537 PLEKHD1A6NEE1 506 aa34.45■■■■□ 3.11
CHFR-217ENST00000540537 ARAP3Q8WWN8 1544 aa34.44■■■■□ 3.1
CHFR-217ENST00000540537 PHLDB1Q86UU1 1377 aa34.43■■■■□ 3.1
CHFR-217ENST00000540537 NEO1Q92859 1461 aa34.38■■■■□ 3.09
CHFR-217ENST00000540537 HECW1Q76N89 1606 aa34.37■■■■□ 3.09
CHFR-217ENST00000540537 CDK13Q14004 1512 aaKnown RBP34.37■■■■□ 3.09
CHFR-217ENST00000540537 ADGRL1O94910 1474 aa34.33■■■■□ 3.09
CHFR-217ENST00000540537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.3■■■■□ 3.08
CHFR-217ENST00000540537 ATP1B4Q9UN42 357 aaPredicted RBP34.26■■■■□ 3.08
CHFR-217ENST00000540537 TTC37Q6PGP7 1564 aa34.24■■■■□ 3.07
CHFR-217ENST00000540537 CFAP74Q9C0B2 1584 aa34.2■■■■□ 3.07
CHFR-217ENST00000540537 CDK11AQ9UQ88 783 aaPredicted RBP34.19■■■■□ 3.06
CHFR-217ENST00000540537 FANCAO15360 1455 aa34.18■■■■□ 3.06
CHFR-217ENST00000540537 RAPGEF3O95398 923 aa34.17■■■■□ 3.06
CHFR-217ENST00000540537 FRMPD1Q5SYB0 1578 aa34.16■■■■□ 3.06
CHFR-217ENST00000540537 AKNAQ7Z591 1439 aa34.15■■■■□ 3.06
CHFR-217ENST00000540537 LRRIQ1Q96JM4 1722 aa34.13■■■■□ 3.05
CHFR-217ENST00000540537 CASKIN1Q8WXD9 1431 aa34.13■■■■□ 3.05
CHFR-217ENST00000540537 DENND4BO75064 1496 aaPredicted RBP34.11■■■■□ 3.05
CHFR-217ENST00000540537 PCF11O94913 1555 aaKnown RBP34.11■■■■□ 3.05
CHFR-217ENST00000540537 PLCH2O75038 1416 aa34.1■■■■□ 3.05
CHFR-217ENST00000540537 TROQ12816 1431 aaPredicted RBP34.1■■■■□ 3.05
CHFR-217ENST00000540537 CLIP1P30622 1438 aa34.09■■■■□ 3.05
CHFR-217ENST00000540537 RICTORQ6R327 1708 aa34.07■■■■□ 3.05
CHFR-217ENST00000540537 KIF14Q15058 1648 aa34.07■■■■□ 3.04
CHFR-217ENST00000540537 CCDC18Q5T9S5 1454 aa34.06■■■■□ 3.04
CHFR-217ENST00000540537 MYO5CQ9NQX4 1742 aa34.04■■■■□ 3.04
CHFR-217ENST00000540537 FYCO1Q9BQS8 1478 aa34.01■■■■□ 3.04
CHFR-217ENST00000540537 ARHGEF40Q8TER5 1519 aa33.98■■■■□ 3.03
CHFR-217ENST00000540537 ZMYM4Q5VZL5 1548 aa33.97■■■■□ 3.03
CHFR-217ENST00000540537 EFCAB2Q5VUJ9 269 aa33.94■■■■□ 3.02
CHFR-217ENST00000540537 SCAPERQ9BY12 1400 aa33.93■■■■□ 3.02
CHFR-217ENST00000540537 POGZQ7Z3K3 1410 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms