RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 RUSC2Q8N2Y8 1516 aa26.48■■□□□ 1.83
UBE3B-211ENST00000539843 IGF1RP08069 1367 aa26.46■■□□□ 1.83
UBE3B-211ENST00000539843 KIAA0586Q9BVV6 1533 aa26.4■■□□□ 1.82
UBE3B-211ENST00000539843 NPM1P06748 294 aaKnown RBP eCLIP26.39■■□□□ 1.82
UBE3B-211ENST00000539843 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
UBE3B-211ENST00000539843 CARMIL2Q6F5E8 1435 aa26.24■■□□□ 1.79
UBE3B-211ENST00000539843 PTPRGP23470 1445 aa26.18■■□□□ 1.78
UBE3B-211ENST00000539843 MAPKBP1O60336 1514 aa26.18■■□□□ 1.78
UBE3B-211ENST00000539843 IQGAP2Q13576 1575 aa26.16■■□□□ 1.78
UBE3B-211ENST00000539843 FAM69CQ0P6D2 419 aa26.16■■□□□ 1.78
UBE3B-211ENST00000539843 ADCY10Q96PN6 1610 aa26.15■■□□□ 1.78
UBE3B-211ENST00000539843 ABCC10Q5T3U5 1492 aa26.15■■□□□ 1.78
UBE3B-211ENST00000539843 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
UBE3B-211ENST00000539843 TNIKQ9UKE5 1360 aa26.14■■□□□ 1.78
UBE3B-211ENST00000539843 RAPGEF2Q9Y4G8 1499 aa26.13■■□□□ 1.77
UBE3B-211ENST00000539843 TTBK1Q5TCY1 1321 aaPredicted RBP26.13■■□□□ 1.77
UBE3B-211ENST00000539843 KIF13AQ9H1H9 1805 aa26.11■■□□□ 1.77
UBE3B-211ENST00000539843 DIP2BQ9P265 1576 aa26.04■■□□□ 1.76
UBE3B-211ENST00000539843 ABCC2Q92887 1545 aa26■■□□□ 1.75
UBE3B-211ENST00000539843 UGGT2Q9NYU1 1516 aa25.98■■□□□ 1.75
UBE3B-211ENST00000539843 UACAQ9BZF9 1416 aa25.97■■□□□ 1.75
UBE3B-211ENST00000539843 DISP1Q96F81 1524 aa25.96■■□□□ 1.75
UBE3B-211ENST00000539843 UHRF1BP1LA0JNW5 1464 aa25.95■■□□□ 1.74
UBE3B-211ENST00000539843 PLB1Q6P1J6 1458 aa25.94■■□□□ 1.74
UBE3B-211ENST00000539843 KIAA0556O60303 1618 aa25.9■■□□□ 1.74
UBE3B-211ENST00000539843 ASXL2Q76L83 1435 aa25.89■■□□□ 1.74
UBE3B-211ENST00000539843 GOLGA3Q08378 1498 aa25.89■■□□□ 1.73
UBE3B-211ENST00000539843 FAM9AQ8IZU1 332 aaPredicted RBP25.87■■□□□ 1.73
UBE3B-211ENST00000539843 KDM6BO15054 1643 aa25.86■■□□□ 1.73
UBE3B-211ENST00000539843 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
UBE3B-211ENST00000539843 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
UBE3B-211ENST00000539843 TSPOAP1O95153 1857 aa25.81■■□□□ 1.72
UBE3B-211ENST00000539843 KDM5BQ9UGL1 1544 aa25.81■■□□□ 1.72
UBE3B-211ENST00000539843 GLI2P10070 1586 aa25.8■■□□□ 1.72
UBE3B-211ENST00000539843 ZCCHC11Q5TAX3 1644 aaKnown RBP25.74■■□□□ 1.71
UBE3B-211ENST00000539843 EPRSP07814 1512 aaKnown RBP25.73■■□□□ 1.71
UBE3B-211ENST00000539843 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
UBE3B-211ENST00000539843 TEX14Q8IWB6 1497 aa25.7■■□□□ 1.7
UBE3B-211ENST00000539843 EEA1Q15075 1411 aa25.69■■□□□ 1.7
UBE3B-211ENST00000539843 WDR7Q9Y4E6 1490 aa25.68■■□□□ 1.7
UBE3B-211ENST00000539843 ABCA8O94911 1581 aa25.63■■□□□ 1.69
UBE3B-211ENST00000539843 MAP3K4Q9Y6R4 1608 aa25.62■■□□□ 1.69
UBE3B-211ENST00000539843 PPRC1Q5VV67 1664 aaKnown RBP25.6■■□□□ 1.69
UBE3B-211ENST00000539843 P3H3Q8IVL6 736 aa25.56■■□□□ 1.68
UBE3B-211ENST00000539843 KCNH8Q96L42 1107 aa25.56■■□□□ 1.68
UBE3B-211ENST00000539843 CD109Q6YHK3 1445 aa25.52■■□□□ 1.68
UBE3B-211ENST00000539843 CFAP43Q8NDM7 1665 aa25.49■■□□□ 1.67
UBE3B-211ENST00000539843 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
UBE3B-211ENST00000539843 MAGI3Q5TCQ9 1506 aa25.47■■□□□ 1.67
UBE3B-211ENST00000539843 ARID3CA6NKF2 412 aa25.47■■□□□ 1.67
UBE3B-211ENST00000539843 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
UBE3B-211ENST00000539843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
UBE3B-211ENST00000539843 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
UBE3B-211ENST00000539843 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
UBE3B-211ENST00000539843 COL17A1Q9UMD9 1497 aaPredicted RBP25.43■■□□□ 1.66
UBE3B-211ENST00000539843 ATP10BO94823 1461 aa25.42■■□□□ 1.66
UBE3B-211ENST00000539843 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
UBE3B-211ENST00000539843 KIF21BO75037 1637 aa25.37■■□□□ 1.65
UBE3B-211ENST00000539843 ADGRL1O94910 1474 aa25.36■■□□□ 1.65
UBE3B-211ENST00000539843 FHOD3Q2V2M9 1422 aa25.35■■□□□ 1.65
UBE3B-211ENST00000539843 EFCAB5A4FU69 1503 aa25.34■■□□□ 1.65
UBE3B-211ENST00000539843 PHLDB1Q86UU1 1377 aa25.32■■□□□ 1.64
UBE3B-211ENST00000539843 ABCA9Q8IUA7 1624 aa25.29■■□□□ 1.64
UBE3B-211ENST00000539843 NUP153P49790 1475 aaKnown RBP25.28■■□□□ 1.64
UBE3B-211ENST00000539843 PLEKHD1A6NEE1 506 aa25.28■■□□□ 1.64
UBE3B-211ENST00000539843 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
UBE3B-211ENST00000539843 ARAP3Q8WWN8 1544 aa25.26■■□□□ 1.63
UBE3B-211ENST00000539843 NEO1Q92859 1461 aa25.22■■□□□ 1.63
UBE3B-211ENST00000539843 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
UBE3B-211ENST00000539843 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
UBE3B-211ENST00000539843 FMN1Q68DA7 1419 aa25.15■■□□□ 1.62
UBE3B-211ENST00000539843 ATP1B4Q9UN42 357 aaPredicted RBP25.12■■□□□ 1.61
UBE3B-211ENST00000539843 RAPGEF3O95398 923 aa25.1■■□□□ 1.61
UBE3B-211ENST00000539843 CFAP74Q9C0B2 1584 aa25.1■■□□□ 1.61
UBE3B-211ENST00000539843 CDK11AQ9UQ88 783 aaPredicted RBP25.09■■□□□ 1.61
UBE3B-211ENST00000539843 HECW1Q76N89 1606 aa25.08■■□□□ 1.6
UBE3B-211ENST00000539843 FANCAO15360 1455 aa25.06■■□□□ 1.6
UBE3B-211ENST00000539843 DENND4BO75064 1496 aaPredicted RBP25.05■■□□□ 1.6
UBE3B-211ENST00000539843 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
UBE3B-211ENST00000539843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.04■■□□□ 1.6
UBE3B-211ENST00000539843 AKNAQ7Z591 1439 aa25.03■■□□□ 1.6
UBE3B-211ENST00000539843 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
UBE3B-211ENST00000539843 ARID4BQ4LE39 1312 aaPredicted RBP25.03■■□□□ 1.6
UBE3B-211ENST00000539843 TTC37Q6PGP7 1564 aa24.98■■□□□ 1.59
UBE3B-211ENST00000539843 FRMPD1Q5SYB0 1578 aa24.97■■□□□ 1.59
UBE3B-211ENST00000539843 HECW2Q9P2P5 1572 aa24.97■■□□□ 1.59
UBE3B-211ENST00000539843 CLIP1P30622 1438 aa24.96■■□□□ 1.59
UBE3B-211ENST00000539843 ARHGEF40Q8TER5 1519 aa24.94■■□□□ 1.58
UBE3B-211ENST00000539843 PLCH2O75038 1416 aa24.94■■□□□ 1.58
UBE3B-211ENST00000539843 EFCAB2Q5VUJ9 269 aa24.91■■□□□ 1.58
UBE3B-211ENST00000539843 KIF14Q15058 1648 aa24.9■■□□□ 1.58
UBE3B-211ENST00000539843 RICTORQ6R327 1708 aa24.9■■□□□ 1.58
UBE3B-211ENST00000539843 POGZQ7Z3K3 1410 aa24.9■■□□□ 1.58
UBE3B-211ENST00000539843 MAGI2Q86UL8 1455 aa24.89■■□□□ 1.58
UBE3B-211ENST00000539843 TROQ12816 1431 aaPredicted RBP24.89■■□□□ 1.58
UBE3B-211ENST00000539843 ZMYM4Q5VZL5 1548 aa24.88■■□□□ 1.57
UBE3B-211ENST00000539843 PTPRMP28827 1452 aa24.88■■□□□ 1.57
UBE3B-211ENST00000539843 SCAPERQ9BY12 1400 aa24.87■■□□□ 1.57
UBE3B-211ENST00000539843 ZFYVE16Q7Z3T8 1539 aa24.87■■□□□ 1.57
UBE3B-211ENST00000539843 ADAMTSL3P82987 1691 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms