RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 WDR62O43379 1518 aa15.63■□□□□ 0.09
SPARC-209ENST00000539687 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
SPARC-209ENST00000539687 EFCAB5A4FU69 1503 aa15.61■□□□□ 0.09
SPARC-209ENST00000539687 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
SPARC-209ENST00000539687 ARHGAP35Q9NRY4 1499 aa15.59■□□□□ 0.09
SPARC-209ENST00000539687 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
SPARC-209ENST00000539687 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
SPARC-209ENST00000539687 MAP3K1Q13233 1512 aa15.55■□□□□ 0.08
SPARC-209ENST00000539687 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
SPARC-209ENST00000539687 PPARGC1BQ86YN6 1023 aaKnown RBP15.52■□□□□ 0.08
SPARC-209ENST00000539687 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
SPARC-209ENST00000539687 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
SPARC-209ENST00000539687 RANGAP1P46060 587 aaPredicted RBP15.51■□□□□ 0.07
SPARC-209ENST00000539687 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.07
SPARC-209ENST00000539687 ADAMTS12P58397 1594 aa15.47■□□□□ 0.07
SPARC-209ENST00000539687 FMN1Q68DA7 1419 aa15.45■□□□□ 0.06
SPARC-209ENST00000539687 FYCO1Q9BQS8 1478 aa15.43■□□□□ 0.06
SPARC-209ENST00000539687 TIAM1Q13009 1591 aa15.41■□□□□ 0.06
SPARC-209ENST00000539687 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
SPARC-209ENST00000539687 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
SPARC-209ENST00000539687 CASKIN1Q8WXD9 1431 aa15.4■□□□□ 0.06
SPARC-209ENST00000539687 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
SPARC-209ENST00000539687 CFAP43Q8NDM7 1665 aa15.38■□□□□ 0.05
SPARC-209ENST00000539687 TTBK1Q5TCY1 1321 aaPredicted RBP15.38■□□□□ 0.05
SPARC-209ENST00000539687 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
SPARC-209ENST00000539687 IQGAP2Q13576 1575 aa15.36■□□□□ 0.05
SPARC-209ENST00000539687 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
SPARC-209ENST00000539687 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
SPARC-209ENST00000539687 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
SPARC-209ENST00000539687 LRRC9Q6ZRR7 1453 aa15.33■□□□□ 0.05
SPARC-209ENST00000539687 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
SPARC-209ENST00000539687 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
SPARC-209ENST00000539687 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
SPARC-209ENST00000539687 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
SPARC-209ENST00000539687 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
SPARC-209ENST00000539687 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
SPARC-209ENST00000539687 UGGT2Q9NYU1 1516 aa15.31■□□□□ 0.04
SPARC-209ENST00000539687 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
SPARC-209ENST00000539687 KIAA0586Q9BVV6 1533 aa15.3■□□□□ 0.04
SPARC-209ENST00000539687 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
SPARC-209ENST00000539687 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
SPARC-209ENST00000539687 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
SPARC-209ENST00000539687 CCNB3Q8WWL7 1395 aa15.28■□□□□ 0.04
SPARC-209ENST00000539687 P3H3Q8IVL6 736 aa15.25■□□□□ 0.03
SPARC-209ENST00000539687 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
SPARC-209ENST00000539687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.23■□□□□ 0.03
SPARC-209ENST00000539687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
SPARC-209ENST00000539687 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
SPARC-209ENST00000539687 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
SPARC-209ENST00000539687 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
SPARC-209ENST00000539687 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
SPARC-209ENST00000539687 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
SPARC-209ENST00000539687 KIAA0556O60303 1618 aa15.19■□□□□ 0.02
SPARC-209ENST00000539687 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
SPARC-209ENST00000539687 NUP160Q12769 1436 aa15.18■□□□□ 0.02
SPARC-209ENST00000539687 MTUS2Q5JR59 1369 aa15.18■□□□□ 0.02
SPARC-209ENST00000539687 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
SPARC-209ENST00000539687 SUPT6HQ7KZ85 1726 aaKnown RBP15.15■□□□□ 0.02
SPARC-209ENST00000539687 CEP170Q5SW79 1584 aa15.14■□□□□ 0.01
SPARC-209ENST00000539687 DISP1Q96F81 1524 aa15.13■□□□□ 0.01
SPARC-209ENST00000539687 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
SPARC-209ENST00000539687 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
SPARC-209ENST00000539687 EPRSP07814 1512 aaKnown RBP15.11■□□□□ 0.01
SPARC-209ENST00000539687 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
SPARC-209ENST00000539687 FGD6Q6ZV73 1430 aa15.09■□□□□ 0.01
SPARC-209ENST00000539687 RAPGEF6Q8TEU7 1601 aa15.08■□□□□ 0
SPARC-209ENST00000539687 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0
SPARC-209ENST00000539687 MYOM3Q5VTT5 1437 aa15.08■□□□□ 0
SPARC-209ENST00000539687 NCOA2Q15596 1464 aa15.08■□□□□ 0
SPARC-209ENST00000539687 CDK11AQ9UQ88 783 aaPredicted RBP15.07■□□□□ 0
SPARC-209ENST00000539687 FBLN2P98095 1184 aa15.05■□□□□ -0
SPARC-209ENST00000539687 MIA2Q96PC5 1412 aa15.04■□□□□ -0
SPARC-209ENST00000539687 JPH4Q96JJ6 628 aa15.04■□□□□ -0
SPARC-209ENST00000539687 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
SPARC-209ENST00000539687 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
SPARC-209ENST00000539687 POTEDQ86YR6 584 aa15.03■□□□□ -0
SPARC-209ENST00000539687 ACIN1Q9UKV3 1341 aaKnown RBP15.02■□□□□ -0
SPARC-209ENST00000539687 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
SPARC-209ENST00000539687 CHD1O14646 1710 aa15.01□□□□□ -0.01
SPARC-209ENST00000539687 NUP153P49790 1475 aaKnown RBP15.01□□□□□ -0.01
SPARC-209ENST00000539687 TCOF1Q13428 1488 aaKnown RBP15□□□□□ -0.01
SPARC-209ENST00000539687 PTPN23Q9H3S7 1636 aa14.98□□□□□ -0.01
SPARC-209ENST00000539687 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
SPARC-209ENST00000539687 CDK13Q14004 1512 aaKnown RBP14.97□□□□□ -0.01
SPARC-209ENST00000539687 MAGI3Q5TCQ9 1506 aa14.97□□□□□ -0.01
SPARC-209ENST00000539687 ITGAEP38570 1179 aa14.96□□□□□ -0.01
SPARC-209ENST00000539687 TROQ12816 1431 aaPredicted RBP14.95□□□□□ -0.02
SPARC-209ENST00000539687 AKNAQ7Z591 1439 aa14.95□□□□□ -0.02
SPARC-209ENST00000539687 ABCA8O94911 1581 aa14.94□□□□□ -0.02
SPARC-209ENST00000539687 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
SPARC-209ENST00000539687 HFM1A2PYH4 1435 aa14.93□□□□□ -0.02
SPARC-209ENST00000539687 ADCY10Q96PN6 1610 aa14.93□□□□□ -0.02
SPARC-209ENST00000539687 PRG4Q92954 1404 aaPredicted RBP14.92□□□□□ -0.02
SPARC-209ENST00000539687 ITSN2Q9NZM3 1697 aa14.91□□□□□ -0.02
SPARC-209ENST00000539687 PLB1Q6P1J6 1458 aa14.9□□□□□ -0.02
SPARC-209ENST00000539687 PTPRGP23470 1445 aa14.9□□□□□ -0.02
SPARC-209ENST00000539687 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
SPARC-209ENST00000539687 KIF14Q15058 1648 aa14.86□□□□□ -0.03
SPARC-209ENST00000539687 PLEKHD1A6NEE1 506 aa14.85□□□□□ -0.03
SPARC-209ENST00000539687 ROCK1Q13464 1354 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms