RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-210ENST00000539303 CHADLQ6NUI6 762 aa7.48□□□□□ -1.21
SNHG1-210ENST00000539303 KDM2AQ9Y2K7 1162 aa7.47□□□□□ -1.21
SNHG1-210ENST00000539303 TRIM41Q8WV44 630 aa7.46□□□□□ -1.22
SNHG1-210ENST00000539303 FAM212AQ96EL1 285 aa7.46□□□□□ -1.22
SNHG1-210ENST00000539303 TSHZ2Q9NRE2 1034 aa7.45□□□□□ -1.22
SNHG1-210ENST00000539303 HS6ST3Q8IZP7 471 aa7.44□□□□□ -1.22
SNHG1-210ENST00000539303 VSIG10Q8N0Z9 540 aa7.44□□□□□ -1.22
SNHG1-210ENST00000539303 PYGBP11216 843 aa7.43□□□□□ -1.22
SNHG1-210ENST00000539303 SPRYD3Q8NCJ5 442 aa7.43□□□□□ -1.22
SNHG1-210ENST00000539303 RIOK3O14730 519 aaKnown RBP7.42□□□□□ -1.22
SNHG1-210ENST00000539303 NKX1-1Q15270 411 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-210ENST00000539303 FXR2P51116 673 aaKnown RBP eCLIP7.38□□□□□ -1.23
SNHG1-210ENST00000539303 STK25O00506 426 aa7.37□□□□□ -1.23
SNHG1-210ENST00000539303 TSPYL2Q9H2G4 693 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-210ENST00000539303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-210ENST00000539303 VGFO15240 615 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-210ENST00000539303 CHRM1P11229 460 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-210ENST00000539303 PRKAR2AP13861 404 aaKnown RBP7.36□□□□□ -1.23
SNHG1-210ENST00000539303 ZFP91Q96JP5 570 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-210ENST00000539303 FARP1Q9Y4F1 1045 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-210ENST00000539303 CHRDL2Q6WN34 429 aa7.35□□□□□ -1.23
SNHG1-210ENST00000539303 DNAJC5Q9H3Z4 198 aa7.35□□□□□ -1.23
SNHG1-210ENST00000539303 GTPBP6O43824 516 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-210ENST00000539303 BCL11BQ9C0K0 894 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-210ENST00000539303 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
SNHG1-210ENST00000539303 BCANQ96GW7 911 aa7.32□□□□□ -1.24
SNHG1-210ENST00000539303 PRKCSHP14314 528 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-210ENST00000539303 TAOK2Q9UL54 1235 aa7.3□□□□□ -1.24
SNHG1-210ENST00000539303 PCDHB8Q9UN66 801 aa7.3□□□□□ -1.24
SNHG1-210ENST00000539303 PCDHB13Q9Y5F0 798 aa7.3□□□□□ -1.24
SNHG1-210ENST00000539303 PIP4P2Q8N4L2 257 aa7.29□□□□□ -1.24
SNHG1-210ENST00000539303 SGIP1Q9BQI5 828 aa7.29□□□□□ -1.24
SNHG1-210ENST00000539303 CCDC61Q9Y6R9 512 aa7.29□□□□□ -1.24
SNHG1-210ENST00000539303 ZNF467Q7Z7K2 595 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-210ENST00000539303 PDAP1Q13442 181 aaKnown RBP7.22□□□□□ -1.25
SNHG1-210ENST00000539303 IFNL1Q8IU54 200 aa7.22□□□□□ -1.25
SNHG1-210ENST00000539303 MAP3K13O43283 966 aa7.21□□□□□ -1.26
SNHG1-210ENST00000539303 PSEN1P49768 467 aa7.2□□□□□ -1.26
SNHG1-210ENST00000539303 ZNF579Q8NAF0 562 aaKnown RBP7.19□□□□□ -1.26
SNHG1-210ENST00000539303 TPRNQ4KMQ1 711 aa7.18□□□□□ -1.26
SNHG1-210ENST00000539303 CADPS2Q86UW7 1296 aa7.18□□□□□ -1.26
SNHG1-210ENST00000539303 KIF12Q96FN5 646 aa7.18□□□□□ -1.26
SNHG1-210ENST00000539303 PHF12Q96QT6 1004 aa7.17□□□□□ -1.26
SNHG1-210ENST00000539303 MFRPQ9BY79 579 aa7.17□□□□□ -1.26
SNHG1-210ENST00000539303 PAK3O75914 559 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-210ENST00000539303 ZRANB1Q9UGI0 708 aa7.16□□□□□ -1.26
SNHG1-210ENST00000539303 CD44P16070 742 aaKnown RBP7.15□□□□□ -1.26
SNHG1-210ENST00000539303 EFCAB3Q8N7B9 438 aa7.14□□□□□ -1.27
SNHG1-210ENST00000539303 CABP2Q9NPB3 220 aa7.14□□□□□ -1.27
SNHG1-210ENST00000539303 PPP1R37O75864 691 aa7.13□□□□□ -1.27
SNHG1-210ENST00000539303 RYDENQ9NUL5 291 aaKnown RBP7.13□□□□□ -1.27
SNHG1-210ENST00000539303 NBR1Q14596 966 aa7.12□□□□□ -1.27
SNHG1-210ENST00000539303 TRPC6Q9Y210 931 aa7.12□□□□□ -1.27
SNHG1-210ENST00000539303 C19orf67A6NJJ6 358 aa7.11□□□□□ -1.27
SNHG1-210ENST00000539303 PHF8Q9UPP1 1060 aa7.11□□□□□ -1.27
SNHG1-210ENST00000539303 FBXO22Q8NEZ5 403 aa7.1□□□□□ -1.27
SNHG1-210ENST00000539303 MS4A3Q96HJ5 214 aa7.08□□□□□ -1.28
SNHG1-210ENST00000539303 KCNV2Q8TDN2 545 aa7.06□□□□□ -1.28
SNHG1-210ENST00000539303 MS4A4AQ96JQ5 239 aa7.06□□□□□ -1.28
SNHG1-210ENST00000539303 NLRP6P59044 892 aa7.05□□□□□ -1.28
SNHG1-210ENST00000539303 TMEM106CQ9BVX2 250 aa7.04□□□□□ -1.28
SNHG1-210ENST00000539303 SOX12O15370 315 aa7.03□□□□□ -1.28
SNHG1-210ENST00000539303 WDR70Q9NW82 654 aa7.01□□□□□ -1.29
SNHG1-210ENST00000539303 CLCN6P51797 869 aa7□□□□□ -1.29
SNHG1-210ENST00000539303 EVX2Q03828 476 aa7□□□□□ -1.29
SNHG1-210ENST00000539303 POTEHQ6S545 545 aa7□□□□□ -1.29
SNHG1-210ENST00000539303 NCKAP5LQ9HCH0 1330 aa7□□□□□ -1.29
SNHG1-210ENST00000539303 TTLL13PA6NNM8 815 aa6.99□□□□□ -1.29
SNHG1-210ENST00000539303 GALR2O43603 387 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-210ENST00000539303 P3H3Q8IVL6 736 aa6.99□□□□□ -1.29
SNHG1-210ENST00000539303 GOLGA2Q08379 1002 aa6.98□□□□□ -1.29
SNHG1-210ENST00000539303 HAX1O00165 279 aa6.97□□□□□ -1.29
SNHG1-210ENST00000539303 BMP2KQ9NSY1 1161 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-210ENST00000539303 TIE1P35590 1138 aa6.95□□□□□ -1.3
SNHG1-210ENST00000539303 MKRN3Q13064 507 aaKnown RBP6.94□□□□□ -1.3
SNHG1-210ENST00000539303 LARP6Q9BRS8 491 aaKnown RBP6.94□□□□□ -1.3
SNHG1-210ENST00000539303 E2F4Q16254 413 aa6.93□□□□□ -1.3
SNHG1-210ENST00000539303 DPY19L2Q6NUT2 758 aa6.93□□□□□ -1.3
SNHG1-210ENST00000539303 CRISPLD2Q9H0B8 497 aa6.93□□□□□ -1.3
SNHG1-210ENST00000539303 TRIM35Q9UPQ4 493 aa6.93□□□□□ -1.3
SNHG1-210ENST00000539303 SEMA3EO15041 775 aa6.91□□□□□ -1.3
SNHG1-210ENST00000539303 LMOD2Q6P5Q4 547 aa6.91□□□□□ -1.3
SNHG1-210ENST00000539303 ILDR1Q86SU0 546 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-210ENST00000539303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNHG1-210ENST00000539303 ATN1P54259 1190 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-210ENST00000539303 MFSD10Q14728 455 aa6.9□□□□□ -1.3
SNHG1-210ENST00000539303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.9□□□□□ -1.3
SNHG1-210ENST00000539303 ARHGEF1Q92888 912 aaKnown RBP6.9□□□□□ -1.3
SNHG1-210ENST00000539303 PDE4AP27815 886 aa6.89□□□□□ -1.31
SNHG1-210ENST00000539303 DDX27Q96GQ7 796 aaKnown RBP6.89□□□□□ -1.31
SNHG1-210ENST00000539303 PDCD7Q8N8D1 485 aaKnown RBP6.87□□□□□ -1.31
SNHG1-210ENST00000539303 ATMINO43313 823 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-210ENST00000539303 TESPA1A2RU30 521 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-210ENST00000539303 GABBR2O75899 941 aa6.85□□□□□ -1.31
SNHG1-210ENST00000539303 MICALL2Q8IY33 904 aa6.85□□□□□ -1.31
SNHG1-210ENST00000539303 IRX5P78411 483 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-210ENST00000539303 CAMK2BQ13554 666 aa6.84□□□□□ -1.31
SNHG1-210ENST00000539303 DSG2Q14126 1118 aa6.83□□□□□ -1.32
SNHG1-210ENST00000539303 PPP1R15BQ5SWA1 713 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms