RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
CLPB-210ENST00000539148 IQGAP2Q13576 1575 aa16.48■□□□□ 0.23
CLPB-210ENST00000539148 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
CLPB-210ENST00000539148 TNIKQ9UKE5 1360 aa16.46■□□□□ 0.23
CLPB-210ENST00000539148 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
CLPB-210ENST00000539148 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
CLPB-210ENST00000539148 CARMIL2Q6F5E8 1435 aa16.38■□□□□ 0.21
CLPB-210ENST00000539148 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
CLPB-210ENST00000539148 EFCAB5A4FU69 1503 aa16.37■□□□□ 0.21
CLPB-210ENST00000539148 UGGT2Q9NYU1 1516 aa16.37■□□□□ 0.21
CLPB-210ENST00000539148 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
CLPB-210ENST00000539148 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
CLPB-210ENST00000539148 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
CLPB-210ENST00000539148 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
CLPB-210ENST00000539148 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
CLPB-210ENST00000539148 CLIP1P30622 1438 aa16.3■□□□□ 0.2
CLPB-210ENST00000539148 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
CLPB-210ENST00000539148 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
CLPB-210ENST00000539148 CEP162Q5TB80 1403 aa16.29■□□□□ 0.2
CLPB-210ENST00000539148 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
CLPB-210ENST00000539148 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
CLPB-210ENST00000539148 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
CLPB-210ENST00000539148 DISP1Q96F81 1524 aa16.23■□□□□ 0.19
CLPB-210ENST00000539148 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
CLPB-210ENST00000539148 ARHGAP35Q9NRY4 1499 aa16.21■□□□□ 0.19
CLPB-210ENST00000539148 PTPRGP23470 1445 aa16.19■□□□□ 0.18
CLPB-210ENST00000539148 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
CLPB-210ENST00000539148 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
CLPB-210ENST00000539148 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
CLPB-210ENST00000539148 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
CLPB-210ENST00000539148 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
CLPB-210ENST00000539148 VPS8Q8N3P4 1428 aa16.11■□□□□ 0.17
CLPB-210ENST00000539148 RAPGEF6Q8TEU7 1601 aa16.1■□□□□ 0.17
CLPB-210ENST00000539148 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
CLPB-210ENST00000539148 HECW1Q76N89 1606 aa16.09■□□□□ 0.17
CLPB-210ENST00000539148 FYCO1Q9BQS8 1478 aa16.09■□□□□ 0.17
CLPB-210ENST00000539148 APLP2Q06481 763 aa16.08■□□□□ 0.16
CLPB-210ENST00000539148 UACAQ9BZF9 1416 aa16.08■□□□□ 0.16
CLPB-210ENST00000539148 CASKIN1Q8WXD9 1431 aa16.07■□□□□ 0.16
CLPB-210ENST00000539148 UHRF1BP1LA0JNW5 1464 aa16.06■□□□□ 0.16
CLPB-210ENST00000539148 ABCA8O94911 1581 aa16.05■□□□□ 0.16
CLPB-210ENST00000539148 ABCC2Q92887 1545 aa16.05■□□□□ 0.16
CLPB-210ENST00000539148 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLPB-210ENST00000539148 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
CLPB-210ENST00000539148 ATP1B4Q9UN42 357 aaPredicted RBP16.04■□□□□ 0.16
CLPB-210ENST00000539148 PCF11O94913 1555 aaKnown RBP16.03■□□□□ 0.16
CLPB-210ENST00000539148 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
CLPB-210ENST00000539148 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
CLPB-210ENST00000539148 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
CLPB-210ENST00000539148 ADCY10Q96PN6 1610 aa15.98■□□□□ 0.15
CLPB-210ENST00000539148 MAP3K1Q13233 1512 aa15.98■□□□□ 0.15
CLPB-210ENST00000539148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
CLPB-210ENST00000539148 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
CLPB-210ENST00000539148 NUP153P49790 1475 aaKnown RBP15.96■□□□□ 0.14
CLPB-210ENST00000539148 EPRSP07814 1512 aaKnown RBP15.95■□□□□ 0.14
CLPB-210ENST00000539148 KDM5BQ9UGL1 1544 aa15.95■□□□□ 0.14
CLPB-210ENST00000539148 CFAP43Q8NDM7 1665 aa15.95■□□□□ 0.14
CLPB-210ENST00000539148 ZCCHC11Q5TAX3 1644 aaKnown RBP15.94■□□□□ 0.14
CLPB-210ENST00000539148 PLEKHD1A6NEE1 506 aa15.92■□□□□ 0.14
CLPB-210ENST00000539148 TIAM1Q13009 1591 aa15.92■□□□□ 0.14
CLPB-210ENST00000539148 LRRIQ1Q96JM4 1722 aa15.91■□□□□ 0.14
CLPB-210ENST00000539148 ATP10BO94823 1461 aa15.91■□□□□ 0.14
CLPB-210ENST00000539148 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
CLPB-210ENST00000539148 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
CLPB-210ENST00000539148 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
CLPB-210ENST00000539148 EHBP1L1Q8N3D4 1523 aa15.86■□□□□ 0.13
CLPB-210ENST00000539148 ARID3CA6NKF2 412 aa15.84■□□□□ 0.13
CLPB-210ENST00000539148 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
CLPB-210ENST00000539148 TROQ12816 1431 aaPredicted RBP15.83■□□□□ 0.12
CLPB-210ENST00000539148 WDR7Q9Y4E6 1490 aa15.83■□□□□ 0.12
CLPB-210ENST00000539148 KIF14Q15058 1648 aa15.83■□□□□ 0.12
CLPB-210ENST00000539148 ASXL2Q76L83 1435 aa15.82■□□□□ 0.12
CLPB-210ENST00000539148 LRRC9Q6ZRR7 1453 aa15.82■□□□□ 0.12
CLPB-210ENST00000539148 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
CLPB-210ENST00000539148 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
CLPB-210ENST00000539148 MYO5CQ9NQX4 1742 aa15.74■□□□□ 0.11
CLPB-210ENST00000539148 GLI2P10070 1586 aa15.73■□□□□ 0.11
CLPB-210ENST00000539148 ABCA9Q8IUA7 1624 aa15.72■□□□□ 0.11
CLPB-210ENST00000539148 MAGI3Q5TCQ9 1506 aa15.72■□□□□ 0.11
CLPB-210ENST00000539148 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.11
CLPB-210ENST00000539148 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
CLPB-210ENST00000539148 NCOA2Q15596 1464 aa15.71■□□□□ 0.1
CLPB-210ENST00000539148 KANK4Q5T7N3 995 aaPredicted RBP15.7■□□□□ 0.1
CLPB-210ENST00000539148 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
CLPB-210ENST00000539148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.1
CLPB-210ENST00000539148 KIF13AQ9H1H9 1805 aa15.68■□□□□ 0.1
CLPB-210ENST00000539148 CFAP74Q9C0B2 1584 aa15.68■□□□□ 0.1
CLPB-210ENST00000539148 ARAP3Q8WWN8 1544 aa15.68■□□□□ 0.1
CLPB-210ENST00000539148 FAM69CQ0P6D2 419 aa15.67■□□□□ 0.1
CLPB-210ENST00000539148 CDC42BPAQ5VT25 1732 aa15.67■□□□□ 0.1
CLPB-210ENST00000539148 PREX2Q70Z35 1606 aa15.66■□□□□ 0.1
CLPB-210ENST00000539148 MAP3K4Q9Y6R4 1608 aa15.66■□□□□ 0.1
CLPB-210ENST00000539148 CD109Q6YHK3 1445 aa15.65■□□□□ 0.1
CLPB-210ENST00000539148 TTC37Q6PGP7 1564 aa15.65■□□□□ 0.1
CLPB-210ENST00000539148 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
CLPB-210ENST00000539148 MYOM3Q5VTT5 1437 aa15.64■□□□□ 0.09
CLPB-210ENST00000539148 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
CLPB-210ENST00000539148 MIA2Q96PC5 1412 aa15.64■□□□□ 0.09
CLPB-210ENST00000539148 CFDP1Q9UEE9 299 aaPredicted RBP15.63■□□□□ 0.09
CLPB-210ENST00000539148 ARHGAP5Q13017 1502 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms