RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 LHX8Q68G74 356 aa10.87□□□□□ -0.67
KNTC1-210ENST00000539013 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
KNTC1-210ENST00000539013 RASEFQ8IZ41 740 aa10.81□□□□□ -0.68
KNTC1-210ENST00000539013 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
KNTC1-210ENST00000539013 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
KNTC1-210ENST00000539013 NUBP1P53384 320 aa10.78□□□□□ -0.68
KNTC1-210ENST00000539013 ASTLQ6HA08 431 aaPredicted RBP10.76□□□□□ -0.69
KNTC1-210ENST00000539013 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
KNTC1-210ENST00000539013 SGIP1Q9BQI5 828 aa10.74□□□□□ -0.69
KNTC1-210ENST00000539013 MAP3K13O43283 966 aa10.71□□□□□ -0.69
KNTC1-210ENST00000539013 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
KNTC1-210ENST00000539013 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
KNTC1-210ENST00000539013 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
KNTC1-210ENST00000539013 TIE1P35590 1138 aa10.68□□□□□ -0.7
KNTC1-210ENST00000539013 C7P10643 843 aa10.67□□□□□ -0.7
KNTC1-210ENST00000539013 PELP1Q8IZL8 1130 aaKnown RBP10.67□□□□□ -0.7
KNTC1-210ENST00000539013 PCDHB13Q9Y5F0 798 aa10.64□□□□□ -0.71
KNTC1-210ENST00000539013 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
KNTC1-210ENST00000539013 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
KNTC1-210ENST00000539013 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
KNTC1-210ENST00000539013 DCAF8Q5TAQ9 597 aa10.62□□□□□ -0.71
KNTC1-210ENST00000539013 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
KNTC1-210ENST00000539013 GSE1Q14687 1217 aa10.59□□□□□ -0.71
KNTC1-210ENST00000539013 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
KNTC1-210ENST00000539013 TTLL13PA6NNM8 815 aa10.57□□□□□ -0.72
KNTC1-210ENST00000539013 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
KNTC1-210ENST00000539013 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
KNTC1-210ENST00000539013 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
KNTC1-210ENST00000539013 MAMSTRQ6ZN01 415 aa10.53□□□□□ -0.72
KNTC1-210ENST00000539013 OTUD5Q96G74 571 aa10.53□□□□□ -0.72
KNTC1-210ENST00000539013 PYGBP11216 843 aa10.52□□□□□ -0.73
KNTC1-210ENST00000539013 IER5LQ5T953 404 aa10.52□□□□□ -0.73
KNTC1-210ENST00000539013 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
KNTC1-210ENST00000539013 IFNLR1Q8IU57 520 aaPredicted RBP10.5□□□□□ -0.73
KNTC1-210ENST00000539013 SPOCK2Q92563 424 aa10.5□□□□□ -0.73
KNTC1-210ENST00000539013 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
KNTC1-210ENST00000539013 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
KNTC1-210ENST00000539013 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
KNTC1-210ENST00000539013 SEC24BO95487 1268 aa10.46□□□□□ -0.73
KNTC1-210ENST00000539013 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
KNTC1-210ENST00000539013 SCUBE2Q9NQ36 999 aa10.44□□□□□ -0.74
KNTC1-210ENST00000539013 POTEJP0CG39 1038 aa10.43□□□□□ -0.74
KNTC1-210ENST00000539013 PCDHB8Q9UN66 801 aa10.42□□□□□ -0.74
KNTC1-210ENST00000539013 COLQQ9Y215 455 aaPredicted RBP10.4□□□□□ -0.74
KNTC1-210ENST00000539013 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
KNTC1-210ENST00000539013 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
KNTC1-210ENST00000539013 PLCG2P16885 1265 aa10.36□□□□□ -0.75
KNTC1-210ENST00000539013 ZCCHC6Q5VYS8 1495 aaKnown RBP10.36□□□□□ -0.75
KNTC1-210ENST00000539013 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
KNTC1-210ENST00000539013 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
KNTC1-210ENST00000539013 PSEN1P49768 467 aa10.31□□□□□ -0.76
KNTC1-210ENST00000539013 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
KNTC1-210ENST00000539013 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
KNTC1-210ENST00000539013 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
KNTC1-210ENST00000539013 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.77
KNTC1-210ENST00000539013 POTEMA6NI47 508 aa10.2□□□□□ -0.78
KNTC1-210ENST00000539013 SLAIN1Q8ND83 568 aa10.2□□□□□ -0.78
KNTC1-210ENST00000539013 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
KNTC1-210ENST00000539013 ILDR1Q86SU0 546 aaPredicted RBP10.19□□□□□ -0.78
KNTC1-210ENST00000539013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.787e-7■■■■□ 24.8
KNTC1-210ENST00000539013 DCAF1Q9Y4B6 1507 aa10.18□□□□□ -0.78
KNTC1-210ENST00000539013 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
KNTC1-210ENST00000539013 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.18□□□□□ -0.78
KNTC1-210ENST00000539013 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
KNTC1-210ENST00000539013 CABP2Q9NPB3 220 aa10.17□□□□□ -0.78
KNTC1-210ENST00000539013 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
KNTC1-210ENST00000539013 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
KNTC1-210ENST00000539013 LCE2DQ5TA82 110 aaPredicted RBP10.14□□□□□ -0.79
KNTC1-210ENST00000539013 SNPHO15079 494 aa10.12□□□□□ -0.79
KNTC1-210ENST00000539013 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
KNTC1-210ENST00000539013 SHROOM4Q9ULL8 1493 aa10.11□□□□□ -0.79
KNTC1-210ENST00000539013 VGFO15240 615 aaPredicted RBP10.11□□□□□ -0.79
KNTC1-210ENST00000539013 TAOK2Q9UL54 1235 aa10.11□□□□□ -0.79
KNTC1-210ENST00000539013 G3V3G9 751 aa10.08□□□□□ -0.8
KNTC1-210ENST00000539013 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
KNTC1-210ENST00000539013 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
KNTC1-210ENST00000539013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.05□□□□□ -0.8
KNTC1-210ENST00000539013 SOX12O15370 315 aa10.05□□□□□ -0.8
KNTC1-210ENST00000539013 ZFP91Q96JP5 570 aaPredicted RBP10.05□□□□□ -0.8
KNTC1-210ENST00000539013 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
KNTC1-210ENST00000539013 ST18O60284 1047 aa10.04□□□□□ -0.8
KNTC1-210ENST00000539013 DPY19L2Q6NUT2 758 aa10.04□□□□□ -0.8
KNTC1-210ENST00000539013 TMEM121BQ9BXQ6 578 aaPredicted RBP10.04□□□□□ -0.8
KNTC1-210ENST00000539013 ECM2O94769 699 aaPredicted RBP10□□□□□ -0.81
KNTC1-210ENST00000539013 PLSCR2Q9NRY7 297 aa9.99□□□□□ -0.81
KNTC1-210ENST00000539013 MYO15BQ96JP2 1530 aa9.96□□□□□ -0.82
KNTC1-210ENST00000539013 PKD2Q13563 968 aa9.95□□□□□ -0.82
KNTC1-210ENST00000539013 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
KNTC1-210ENST00000539013 NLRP6P59044 892 aa9.93□□□□□ -0.82
KNTC1-210ENST00000539013 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
KNTC1-210ENST00000539013 CDAN1Q8IWY9 1227 aa9.92□□□□□ -0.82
KNTC1-210ENST00000539013 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
KNTC1-210ENST00000539013 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
KNTC1-210ENST00000539013 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
KNTC1-210ENST00000539013 MICALL2Q8IY33 904 aa9.91□□□□□ -0.82
KNTC1-210ENST00000539013 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
KNTC1-210ENST00000539013 STK25O00506 426 aa9.9□□□□□ -0.82
KNTC1-210ENST00000539013 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
KNTC1-210ENST00000539013 RGL2O15211 777 aa9.88□□□□□ -0.83
KNTC1-210ENST00000539013 FBXO22Q8NEZ5 403 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms