RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 YTHDC1Q96MU7 727 aaKnown RBP23.15■■□□□ 1.3
CDH20-203ENST00000538374 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.3
CDH20-203ENST00000538374 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
CDH20-203ENST00000538374 PBRM1Q86U86 1689 aa23.14■■□□□ 1.29
CDH20-203ENST00000538374 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
CDH20-203ENST00000538374 ZNF316A6NFI3 1004 aaPredicted RBP23.1■■□□□ 1.29
CDH20-203ENST00000538374 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
CDH20-203ENST00000538374 APLP2Q06481 763 aa23.06■■□□□ 1.28
CDH20-203ENST00000538374 IFT140Q96RY7 1462 aa23■■□□□ 1.27
CDH20-203ENST00000538374 ADAMTS12P58397 1594 aa23■■□□□ 1.27
CDH20-203ENST00000538374 EFCAB5A4FU69 1503 aa22.99■■□□□ 1.27
CDH20-203ENST00000538374 CENPBP07199 599 aaPredicted RBP22.98■■□□□ 1.27
CDH20-203ENST00000538374 MIER1Q8N108 512 aa22.98■■□□□ 1.27
CDH20-203ENST00000538374 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDH20-203ENST00000538374 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
CDH20-203ENST00000538374 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
CDH20-203ENST00000538374 ZNF608Q9ULD9 1512 aaPredicted RBP22.93■■□□□ 1.26
CDH20-203ENST00000538374 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
CDH20-203ENST00000538374 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
CDH20-203ENST00000538374 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
CDH20-203ENST00000538374 PCF11O94913 1555 aaKnown RBP22.9■■□□□ 1.26
CDH20-203ENST00000538374 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
CDH20-203ENST00000538374 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.25
CDH20-203ENST00000538374 FHAD1B1AJZ9 1412 aa22.89■■□□□ 1.25
CDH20-203ENST00000538374 TIAM1Q13009 1591 aa22.88■■□□□ 1.25
CDH20-203ENST00000538374 FHOD3Q2V2M9 1422 aa22.83■■□□□ 1.25
CDH20-203ENST00000538374 PELP1Q8IZL8 1130 aaKnown RBP22.83■■□□□ 1.25
CDH20-203ENST00000538374 ITGAEP38570 1179 aa22.8■■□□□ 1.24
CDH20-203ENST00000538374 FYCO1Q9BQS8 1478 aa22.78■■□□□ 1.24
CDH20-203ENST00000538374 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
CDH20-203ENST00000538374 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
CDH20-203ENST00000538374 LRRIQ1Q96JM4 1722 aa22.76■■□□□ 1.23
CDH20-203ENST00000538374 CASKIN1Q8WXD9 1431 aa22.75■■□□□ 1.23
CDH20-203ENST00000538374 RRBP1Q9P2E9 1410 aaKnown RBP22.73■■□□□ 1.23
CDH20-203ENST00000538374 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
CDH20-203ENST00000538374 P3H3Q8IVL6 736 aa22.7■■□□□ 1.22
CDH20-203ENST00000538374 FMN1Q68DA7 1419 aa22.69■■□□□ 1.22
CDH20-203ENST00000538374 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
CDH20-203ENST00000538374 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
CDH20-203ENST00000538374 UGGT2Q9NYU1 1516 aa22.67■■□□□ 1.22
CDH20-203ENST00000538374 DHX57Q6P158 1386 aaKnown RBP22.64■■□□□ 1.22
CDH20-203ENST00000538374 KIAA0586Q9BVV6 1533 aa22.6■■□□□ 1.21
CDH20-203ENST00000538374 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
CDH20-203ENST00000538374 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
CDH20-203ENST00000538374 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
CDH20-203ENST00000538374 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
CDH20-203ENST00000538374 DISP1Q96F81 1524 aa22.54■■□□□ 1.2
CDH20-203ENST00000538374 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
CDH20-203ENST00000538374 HECW1Q76N89 1606 aa22.52■■□□□ 1.2
CDH20-203ENST00000538374 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
CDH20-203ENST00000538374 NUP160Q12769 1436 aa22.5■■□□□ 1.19
CDH20-203ENST00000538374 MAGI3Q5TCQ9 1506 aa22.46■■□□□ 1.19
CDH20-203ENST00000538374 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.19
CDH20-203ENST00000538374 EHBP1L1Q8N3D4 1523 aa22.45■■□□□ 1.18
CDH20-203ENST00000538374 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
CDH20-203ENST00000538374 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
CDH20-203ENST00000538374 EPRSP07814 1512 aaKnown RBP22.4■■□□□ 1.18
CDH20-203ENST00000538374 KCNH8Q96L42 1107 aa22.39■■□□□ 1.18
CDH20-203ENST00000538374 FAM50AQ14320 339 aaKnown RBP22.38■■□□□ 1.17
CDH20-203ENST00000538374 RAPGEF6Q8TEU7 1601 aa22.38■■□□□ 1.17
CDH20-203ENST00000538374 CHD1O14646 1710 aa22.37■■□□□ 1.17
CDH20-203ENST00000538374 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
CDH20-203ENST00000538374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.36■■□□□ 1.17
CDH20-203ENST00000538374 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
CDH20-203ENST00000538374 NCOA2Q15596 1464 aa22.36■■□□□ 1.17
CDH20-203ENST00000538374 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
CDH20-203ENST00000538374 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
CDH20-203ENST00000538374 RAB3GAP2Q9H2M9 1393 aa22.34■■□□□ 1.17
CDH20-203ENST00000538374 CLSPNQ9HAW4 1339 aa22.34■■□□□ 1.17
CDH20-203ENST00000538374 FGD6Q6ZV73 1430 aa22.33■■□□□ 1.17
CDH20-203ENST00000538374 NUP153P49790 1475 aaKnown RBP22.32■■□□□ 1.16
CDH20-203ENST00000538374 HIRIP3Q9BW71 556 aaPredicted RBP22.31■■□□□ 1.16
CDH20-203ENST00000538374 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
CDH20-203ENST00000538374 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
CDH20-203ENST00000538374 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
CDH20-203ENST00000538374 FBLN2P98095 1184 aa22.24■■□□□ 1.15
CDH20-203ENST00000538374 ABCA8O94911 1581 aa22.21■■□□□ 1.15
CDH20-203ENST00000538374 TCOF1Q13428 1488 aaKnown RBP22.21■■□□□ 1.15
CDH20-203ENST00000538374 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
CDH20-203ENST00000538374 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
CDH20-203ENST00000538374 PLB1Q6P1J6 1458 aa22.2■■□□□ 1.14
CDH20-203ENST00000538374 DDX10Q13206 875 aaKnown RBP22.19■■□□□ 1.14
CDH20-203ENST00000538374 SETD5Q9C0A6 1442 aa22.19■■□□□ 1.14
CDH20-203ENST00000538374 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
CDH20-203ENST00000538374 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
CDH20-203ENST00000538374 SUPT16HQ9Y5B9 1047 aaKnown RBP22.17■■□□□ 1.14
CDH20-203ENST00000538374 PTPRKQ15262 1439 aa22.16■■□□□ 1.14
CDH20-203ENST00000538374 MIA2Q96PC5 1412 aa22.11■■□□□ 1.13
CDH20-203ENST00000538374 PRG4Q92954 1404 aaPredicted RBP22.1■■□□□ 1.13
CDH20-203ENST00000538374 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
CDH20-203ENST00000538374 KIF14Q15058 1648 aa22.07■■□□□ 1.12
CDH20-203ENST00000538374 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
CDH20-203ENST00000538374 TROQ12816 1431 aaPredicted RBP22.07■■□□□ 1.12
CDH20-203ENST00000538374 HFM1A2PYH4 1435 aa22.07■■□□□ 1.12
CDH20-203ENST00000538374 ARID3CA6NKF2 412 aa22.06■■□□□ 1.12
CDH20-203ENST00000538374 BCANQ96GW7 911 aa22.06■■□□□ 1.12
CDH20-203ENST00000538374 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
CDH20-203ENST00000538374 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
CDH20-203ENST00000538374 ATP10BO94823 1461 aa22.01■■□□□ 1.11
CDH20-203ENST00000538374 NAIPQ13075 1403 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms