RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
AC087235.1-201ENST00000538297 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
AC087235.1-201ENST00000538297 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
AC087235.1-201ENST00000538297 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
AC087235.1-201ENST00000538297 EEA1Q15075 1411 aa18.42■□□□□ 0.54
AC087235.1-201ENST00000538297 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
AC087235.1-201ENST00000538297 IGF1RP08069 1367 aa18.4■□□□□ 0.54
AC087235.1-201ENST00000538297 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
AC087235.1-201ENST00000538297 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
AC087235.1-201ENST00000538297 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
AC087235.1-201ENST00000538297 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
AC087235.1-201ENST00000538297 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
AC087235.1-201ENST00000538297 APLP2Q06481 763 aa18.34■□□□□ 0.53
AC087235.1-201ENST00000538297 CUL7Q14999 1698 aa18.33■□□□□ 0.53
AC087235.1-201ENST00000538297 SLC4A2P04920 1241 aa18.33■□□□□ 0.53
AC087235.1-201ENST00000538297 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
AC087235.1-201ENST00000538297 KCNA4P22459 653 aa18.31■□□□□ 0.52
AC087235.1-201ENST00000538297 FBLN2P98095 1184 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
AC087235.1-201ENST00000538297 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.52
AC087235.1-201ENST00000538297 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
AC087235.1-201ENST00000538297 ABCB7O75027 752 aa18.24■□□□□ 0.51
AC087235.1-201ENST00000538297 CHD1O14646 1710 aa18.24■□□□□ 0.51
AC087235.1-201ENST00000538297 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
AC087235.1-201ENST00000538297 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
AC087235.1-201ENST00000538297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
AC087235.1-201ENST00000538297 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
AC087235.1-201ENST00000538297 NUP160Q12769 1436 aa18.18■□□□□ 0.5
AC087235.1-201ENST00000538297 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
AC087235.1-201ENST00000538297 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
AC087235.1-201ENST00000538297 KIAA0586Q9BVV6 1533 aa18.12■□□□□ 0.49
AC087235.1-201ENST00000538297 CLASP1Q7Z460 1538 aa18.1■□□□□ 0.49
AC087235.1-201ENST00000538297 KIF21BO75037 1637 aa18.1■□□□□ 0.49
AC087235.1-201ENST00000538297 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
AC087235.1-201ENST00000538297 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
AC087235.1-201ENST00000538297 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
AC087235.1-201ENST00000538297 GOLGA3Q08378 1498 aa18.02■□□□□ 0.47
AC087235.1-201ENST00000538297 IQGAP2Q13576 1575 aa17.99■□□□□ 0.47
AC087235.1-201ENST00000538297 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
AC087235.1-201ENST00000538297 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
AC087235.1-201ENST00000538297 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
AC087235.1-201ENST00000538297 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
AC087235.1-201ENST00000538297 UGGT2Q9NYU1 1516 aa17.94■□□□□ 0.46
AC087235.1-201ENST00000538297 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
AC087235.1-201ENST00000538297 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
AC087235.1-201ENST00000538297 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
AC087235.1-201ENST00000538297 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
AC087235.1-201ENST00000538297 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
AC087235.1-201ENST00000538297 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
AC087235.1-201ENST00000538297 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
AC087235.1-201ENST00000538297 DISP1Q96F81 1524 aa17.83■□□□□ 0.44
AC087235.1-201ENST00000538297 EFCAB5A4FU69 1503 aa17.8■□□□□ 0.44
AC087235.1-201ENST00000538297 PTPRGP23470 1445 aa17.79■□□□□ 0.44
AC087235.1-201ENST00000538297 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
AC087235.1-201ENST00000538297 KIAA0556O60303 1618 aa17.78■□□□□ 0.44
AC087235.1-201ENST00000538297 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
AC087235.1-201ENST00000538297 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
AC087235.1-201ENST00000538297 SAMD9Q5K651 1589 aa17.77■□□□□ 0.43
AC087235.1-201ENST00000538297 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.43
AC087235.1-201ENST00000538297 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
AC087235.1-201ENST00000538297 MYCNP04198 464 aaPredicted RBP17.71■□□□□ 0.42
AC087235.1-201ENST00000538297 POLA2Q14181 598 aa17.71■□□□□ 0.42
AC087235.1-201ENST00000538297 CLIP1P30622 1438 aa17.69■□□□□ 0.42
AC087235.1-201ENST00000538297 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 FMN1Q68DA7 1419 aa17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 UHRF1BP1LA0JNW5 1464 aa17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
AC087235.1-201ENST00000538297 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
AC087235.1-201ENST00000538297 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
AC087235.1-201ENST00000538297 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
AC087235.1-201ENST00000538297 CEP162Q5TB80 1403 aa17.65■□□□□ 0.42
AC087235.1-201ENST00000538297 FHOD3Q2V2M9 1422 aa17.62■□□□□ 0.41
AC087235.1-201ENST00000538297 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
AC087235.1-201ENST00000538297 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
AC087235.1-201ENST00000538297 ABCA8O94911 1581 aa17.6■□□□□ 0.41
AC087235.1-201ENST00000538297 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.4
AC087235.1-201ENST00000538297 KDM5BQ9UGL1 1544 aa17.56■□□□□ 0.4
AC087235.1-201ENST00000538297 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
AC087235.1-201ENST00000538297 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
AC087235.1-201ENST00000538297 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
AC087235.1-201ENST00000538297 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
AC087235.1-201ENST00000538297 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
AC087235.1-201ENST00000538297 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
AC087235.1-201ENST00000538297 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
AC087235.1-201ENST00000538297 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
AC087235.1-201ENST00000538297 ATP10BO94823 1461 aa17.47■□□□□ 0.39
AC087235.1-201ENST00000538297 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
AC087235.1-201ENST00000538297 CCDC18Q5T9S5 1454 aa17.45■□□□□ 0.38
AC087235.1-201ENST00000538297 ZCCHC11Q5TAX3 1644 aaKnown RBP17.44■□□□□ 0.38
AC087235.1-201ENST00000538297 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
AC087235.1-201ENST00000538297 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
AC087235.1-201ENST00000538297 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
AC087235.1-201ENST00000538297 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
AC087235.1-201ENST00000538297 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.38
AC087235.1-201ENST00000538297 WDR7Q9Y4E6 1490 aa17.39■□□□□ 0.37
AC087235.1-201ENST00000538297 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms