RNA–Protein interactions for RNA: ENST00000538013.5

RAD9A-205, Transcript of RAD9 checkpoint clamp component A, human

TSL 5

Gene RAD9A, Length 924 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD9A-205	ENST00000538013	IGF1R	P08069	1367 aa		33.07	■■■□□ 2.88
RAD9A-205	ENST00000538013	CUL7	Q14999	1698 aa		33.05	■■■□□ 2.88
RAD9A-205	ENST00000538013	KIAA0586	Q9BVV6	1533 aa		32.95	■■■□□ 2.87
RAD9A-205	ENST00000538013	CARMIL1	Q5VZK9	1371 aa		32.83	■■■□□ 2.85
RAD9A-205	ENST00000538013	KIF13A	Q9H1H9	1805 aa		32.81	■■■□□ 2.84
RAD9A-205	ENST00000538013	ADCY10	Q96PN6	1610 aa		32.77	■■■□□ 2.84
RAD9A-205	ENST00000538013	MAPKBP1	O60336	1514 aa		32.72	■■■□□ 2.83
RAD9A-205	ENST00000538013	NPM1	P06748	294 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
RAD9A-205	ENST00000538013	ABCC10	Q5T3U5	1492 aa		32.66	■■■□□ 2.82
RAD9A-205	ENST00000538013	IQGAP2	Q13576	1575 aa		32.65	■■■□□ 2.82
RAD9A-205	ENST00000538013	DIP2B	Q9P265	1576 aa		32.6	■■■□□ 2.81
RAD9A-205	ENST00000538013	CARMIL2	Q6F5E8	1435 aa		32.6	■■■□□ 2.81
RAD9A-205	ENST00000538013	PTPRG	P23470	1445 aa		32.59	■■■□□ 2.81
RAD9A-205	ENST00000538013	RAPGEF2	Q9Y4G8	1499 aa		32.57	■■■□□ 2.8
RAD9A-205	ENST00000538013	TNIK	Q9UKE5	1360 aa		32.56	■■■□□ 2.8
RAD9A-205	ENST00000538013	FAM69C	Q0P6D2	419 aa		32.55	■■■□□ 2.8
RAD9A-205	ENST00000538013	DISP1	Q96F81	1524 aa		32.49	■■■□□ 2.79
RAD9A-205	ENST00000538013	UGGT2	Q9NYU1	1516 aa		32.46	■■■□□ 2.79
RAD9A-205	ENST00000538013	ABCC2	Q92887	1545 aa		32.44	■■■□□ 2.78
RAD9A-205	ENST00000538013	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.43	■■■□□ 2.78
RAD9A-205	ENST00000538013	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.43	■■■□□ 2.78
RAD9A-205	ENST00000538013	UHRF1BP1L	A0JNW5	1464 aa		32.42	■■■□□ 2.78
RAD9A-205	ENST00000538013	KIAA0556	O60303	1618 aa		32.37	■■■□□ 2.77
RAD9A-205	ENST00000538013	UACA	Q9BZF9	1416 aa		32.36	■■■□□ 2.77
RAD9A-205	ENST00000538013	CTTNBP2	Q8WZ74	1663 aa		32.35	■■■□□ 2.77
RAD9A-205	ENST00000538013	TSPOAP1	O95153	1857 aa		32.33	■■■□□ 2.77
RAD9A-205	ENST00000538013	ASXL2	Q76L83	1435 aa		32.31	■■■□□ 2.76
RAD9A-205	ENST00000538013	PLB1	Q6P1J6	1458 aa		32.29	■■■□□ 2.76
RAD9A-205	ENST00000538013	PRX	Q9BXM0	1461 aa		32.29	■■■□□ 2.76
RAD9A-205	ENST00000538013	KDM5B	Q9UGL1	1544 aa		32.26	■■■□□ 2.76
RAD9A-205	ENST00000538013	KDM6B	O15054	1643 aa		32.26	■■■□□ 2.76
RAD9A-205	ENST00000538013	GLI2	P10070	1586 aa		32.25	■■■□□ 2.75
RAD9A-205	ENST00000538013	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.2	■■■□□ 2.75
RAD9A-205	ENST00000538013	PPRC1	Q5VV67	1664 aa	Known RBP	32.18	■■■□□ 2.74
RAD9A-205	ENST00000538013	GOLGA3	Q08378	1498 aa		32.17	■■■□□ 2.74
RAD9A-205	ENST00000538013	EPRS	P07814	1512 aa	Known RBP	32.13	■■■□□ 2.73
RAD9A-205	ENST00000538013	MAP3K4	Q9Y6R4	1608 aa		32.09	■■■□□ 2.73
RAD9A-205	ENST00000538013	ABCA8	O94911	1581 aa		32.07	■■■□□ 2.72
RAD9A-205	ENST00000538013	WDR7	Q9Y4E6	1490 aa		32.02	■■■□□ 2.72
RAD9A-205	ENST00000538013	CSRNP3	Q8WYN3	585 aa		31.99	■■■□□ 2.71
RAD9A-205	ENST00000538013	TEX14	Q8IWB6	1497 aa		31.95	■■■□□ 2.7
RAD9A-205	ENST00000538013	EEA1	Q15075	1411 aa		31.92	■■■□□ 2.7
RAD9A-205	ENST00000538013	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.91	■■■□□ 2.7
RAD9A-205	ENST00000538013	SAMD9	Q5K651	1589 aa		31.9	■■■□□ 2.7
RAD9A-205	ENST00000538013	KDM4F	A0A1W2PPD8	638 aa		31.88	■■■□□ 2.69
RAD9A-205	ENST00000538013	CFAP43	Q8NDM7	1665 aa		31.86	■■■□□ 2.69
RAD9A-205	ENST00000538013	P3H3	Q8IVL6	736 aa		31.82	■■■□□ 2.68
RAD9A-205	ENST00000538013	MAGI3	Q5TCQ9	1506 aa		31.8	■■■□□ 2.68
RAD9A-205	ENST00000538013	CD109	Q6YHK3	1445 aa		31.79	■■■□□ 2.68
RAD9A-205	ENST00000538013	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.79	■■■□□ 2.68
RAD9A-205	ENST00000538013	KCNH8	Q96L42	1107 aa		31.78	■■■□□ 2.68
RAD9A-205	ENST00000538013	ATP10B	O94823	1461 aa		31.78	■■■□□ 2.68
RAD9A-205	ENST00000538013	RAPGEF6	Q8TEU7	1601 aa		31.73	■■■□□ 2.67
RAD9A-205	ENST00000538013	KIF21B	O75037	1637 aa		31.69	■■■□□ 2.66
RAD9A-205	ENST00000538013	ARID3C	A6NKF2	412 aa		31.68	■■■□□ 2.66
RAD9A-205	ENST00000538013	ADGRL1	O94910	1474 aa		31.66	■■■□□ 2.66
RAD9A-205	ENST00000538013	ABCA9	Q8IUA7	1624 aa		31.63	■■■□□ 2.65
RAD9A-205	ENST00000538013	NUP153	P49790	1475 aa	Known RBP	31.61	■■■□□ 2.65
RAD9A-205	ENST00000538013	FHOD3	Q2V2M9	1422 aa		31.61	■■■□□ 2.65
RAD9A-205	ENST00000538013	EFCAB5	A4FU69	1503 aa		31.58	■■■□□ 2.65
RAD9A-205	ENST00000538013	RANGAP1	P46060	587 aa	Predicted RBP	31.57	■■■□□ 2.64
RAD9A-205	ENST00000538013	ARAP3	Q8WWN8	1544 aa		31.56	■■■□□ 2.64
RAD9A-205	ENST00000538013	PHLDB1	Q86UU1	1377 aa		31.49	■■■□□ 2.63
RAD9A-205	ENST00000538013	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.49	■■■□□ 2.63
RAD9A-205	ENST00000538013	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.49	■■■□□ 2.63
RAD9A-205	ENST00000538013	CHIC1	Q5VXU3	224 aa		31.46	■■■□□ 2.63
RAD9A-205	ENST00000538013	NEO1	Q92859	1461 aa		31.44	■■■□□ 2.62
RAD9A-205	ENST00000538013	PLEKHD1	A6NEE1	506 aa		31.37	■■■□□ 2.61
RAD9A-205	ENST00000538013	UBTF	P17480	764 aa	Known RBP	31.33	■■■□□ 2.61
RAD9A-205	ENST00000538013	FRMPD1	Q5SYB0	1578 aa		31.32	■■■□□ 2.6
RAD9A-205	ENST00000538013	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.31	■■■□□ 2.6
RAD9A-205	ENST00000538013	RAPGEF3	O95398	923 aa		31.3	■■■□□ 2.6
RAD9A-205	ENST00000538013	CDK13	Q14004	1512 aa	Known RBP	31.29	■■■□□ 2.6
RAD9A-205	ENST00000538013	EHMT2	Q96KQ7	1210 aa		31.29	■■■□□ 2.6
RAD9A-205	ENST00000538013	ARHGAP35	Q9NRY4	1499 aa		31.28	■■■□□ 2.6
RAD9A-205	ENST00000538013	TTC37	Q6PGP7	1564 aa		31.27	■■■□□ 2.6
RAD9A-205	ENST00000538013	FMN1	Q68DA7	1419 aa		31.26	■■■□□ 2.6
RAD9A-205	ENST00000538013	CFAP74	Q9C0B2	1584 aa		31.25	■■■□□ 2.59
RAD9A-205	ENST00000538013	HECW1	Q76N89	1606 aa		31.23	■■■□□ 2.59
RAD9A-205	ENST00000538013	FANCA	O15360	1455 aa		31.22	■■■□□ 2.59
RAD9A-205	ENST00000538013	HECW2	Q9P2P5	1572 aa		31.22	■■■□□ 2.59
RAD9A-205	ENST00000538013	RICTOR	Q6R327	1708 aa		31.21	■■■□□ 2.59
RAD9A-205	ENST00000538013	AKNA	Q7Z591	1439 aa		31.21	■■■□□ 2.59
RAD9A-205	ENST00000538013	DENND4B	O75064	1496 aa	Predicted RBP	31.19	■■■□□ 2.58
RAD9A-205	ENST00000538013	ADAMTSL3	P82987	1691 aa		31.17	■■■□□ 2.58
RAD9A-205	ENST00000538013	ARHGEF40	Q8TER5	1519 aa		31.14	■■■□□ 2.58
RAD9A-205	ENST00000538013	BCORL1	Q5H9F3	1711 aa		31.11	■■■□□ 2.57
RAD9A-205	ENST00000538013	ZMYM4	Q5VZL5	1548 aa		31.1	■■■□□ 2.57
RAD9A-205	ENST00000538013	PLCH2	O75038	1416 aa		31.1	■■■□□ 2.57
RAD9A-205	ENST00000538013	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.1	■■■□□ 2.57
RAD9A-205	ENST00000538013	LRRIQ1	Q96JM4	1722 aa		31.07	■■■□□ 2.56
RAD9A-205	ENST00000538013	PTPRM	P28827	1452 aa		31.06	■■■□□ 2.56
RAD9A-205	ENST00000538013	MYO5C	Q9NQX4	1742 aa		31.05	■■■□□ 2.56
RAD9A-205	ENST00000538013	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.05	■■■□□ 2.56
RAD9A-205	ENST00000538013	KIF14	Q15058	1648 aa		31.04	■■■□□ 2.56
RAD9A-205	ENST00000538013	MADD	Q8WXG6	1647 aa		31.02	■■■□□ 2.56
RAD9A-205	ENST00000538013	TRO	Q12816	1431 aa	Predicted RBP	31.01	■■■□□ 2.55
RAD9A-205	ENST00000538013	MAGI2	Q86UL8	1455 aa		31.01	■■■□□ 2.55
RAD9A-205	ENST00000538013	ARID4B	Q4LE39	1312 aa	Predicted RBP	31	■■■□□ 2.55
RAD9A-205	ENST00000538013	ZFYVE16	Q7Z3T8	1539 aa		31	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms