RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 CHMP7Q8WUX9 453 aaPredicted RBP19.7■□□□□ 0.74
DDB1-209ENST00000537877 CHD1O14646 1710 aa19.69■□□□□ 0.74
DDB1-209ENST00000537877 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
DDB1-209ENST00000537877 NUP160Q12769 1436 aa19.68■□□□□ 0.74
DDB1-209ENST00000537877 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
DDB1-209ENST00000537877 EFCAB5A4FU69 1503 aa19.67■□□□□ 0.74
DDB1-209ENST00000537877 KIAA0586Q9BVV6 1533 aa19.67■□□□□ 0.74
DDB1-209ENST00000537877 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
DDB1-209ENST00000537877 FBLN2P98095 1184 aa19.62■□□□□ 0.73
DDB1-209ENST00000537877 SAMD9Q5K651 1589 aa19.61■□□□□ 0.73
DDB1-209ENST00000537877 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
DDB1-209ENST00000537877 UGGT2Q9NYU1 1516 aa19.59■□□□□ 0.73
DDB1-209ENST00000537877 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
DDB1-209ENST00000537877 VPS8Q8N3P4 1428 aa19.56■□□□□ 0.72
DDB1-209ENST00000537877 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
DDB1-209ENST00000537877 CLASP1Q7Z460 1538 aa19.49■□□□□ 0.71
DDB1-209ENST00000537877 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
DDB1-209ENST00000537877 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
DDB1-209ENST00000537877 DISP1Q96F81 1524 aa19.46■□□□□ 0.71
DDB1-209ENST00000537877 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
DDB1-209ENST00000537877 CARMIL2Q6F5E8 1435 aa19.43■□□□□ 0.7
DDB1-209ENST00000537877 JPH4Q96JJ6 628 aa19.42■□□□□ 0.7
DDB1-209ENST00000537877 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
DDB1-209ENST00000537877 PCF11O94913 1555 aaKnown RBP19.4■□□□□ 0.7
DDB1-209ENST00000537877 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
DDB1-209ENST00000537877 CASKIN1Q8WXD9 1431 aa19.36■□□□□ 0.69
DDB1-209ENST00000537877 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
DDB1-209ENST00000537877 MAP3K1Q13233 1512 aa19.32■□□□□ 0.68
DDB1-209ENST00000537877 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
DDB1-209ENST00000537877 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
DDB1-209ENST00000537877 CFAP43Q8NDM7 1665 aa19.3■□□□□ 0.68
DDB1-209ENST00000537877 APLP2Q06481 763 aa19.3■□□□□ 0.68
DDB1-209ENST00000537877 TIAM1Q13009 1591 aa19.28■□□□□ 0.68
DDB1-209ENST00000537877 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
DDB1-209ENST00000537877 ERCC6L2Q5T890 1561 aa19.25■□□□□ 0.67
DDB1-209ENST00000537877 CCDC18Q5T9S5 1454 aa19.24■□□□□ 0.67
DDB1-209ENST00000537877 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
DDB1-209ENST00000537877 ABCA8O94911 1581 aa19.22■□□□□ 0.67
DDB1-209ENST00000537877 PTPRGP23470 1445 aa19.21■□□□□ 0.67
DDB1-209ENST00000537877 NUP153P49790 1475 aaKnown RBP19.18■□□□□ 0.66
DDB1-209ENST00000537877 PLB1Q6P1J6 1458 aa19.18■□□□□ 0.66
DDB1-209ENST00000537877 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
DDB1-209ENST00000537877 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
DDB1-209ENST00000537877 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
DDB1-209ENST00000537877 TTBK1Q5TCY1 1321 aaPredicted RBP19.14■□□□□ 0.65
DDB1-209ENST00000537877 UACAQ9BZF9 1416 aa19.12■□□□□ 0.65
DDB1-209ENST00000537877 PPARGC1BQ86YN6 1023 aaKnown RBP19.12■□□□□ 0.65
DDB1-209ENST00000537877 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
DDB1-209ENST00000537877 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
DDB1-209ENST00000537877 ABCC2Q92887 1545 aa19.12■□□□□ 0.65
DDB1-209ENST00000537877 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
DDB1-209ENST00000537877 UHRF1BP1LA0JNW5 1464 aa19.09■□□□□ 0.65
DDB1-209ENST00000537877 TRIM26Q12899 539 aaPredicted RBP19.06■□□□□ 0.64
DDB1-209ENST00000537877 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
DDB1-209ENST00000537877 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
DDB1-209ENST00000537877 MAGI3Q5TCQ9 1506 aa19.04■□□□□ 0.64
DDB1-209ENST00000537877 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
DDB1-209ENST00000537877 ATP10BO94823 1461 aa19.03■□□□□ 0.64
DDB1-209ENST00000537877 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
DDB1-209ENST00000537877 ADCY10Q96PN6 1610 aa19■□□□□ 0.63
DDB1-209ENST00000537877 KDM5BQ9UGL1 1544 aa18.99■□□□□ 0.63
DDB1-209ENST00000537877 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
DDB1-209ENST00000537877 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
DDB1-209ENST00000537877 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
DDB1-209ENST00000537877 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
DDB1-209ENST00000537877 ZCCHC11Q5TAX3 1644 aaKnown RBP18.97■□□□□ 0.63
DDB1-209ENST00000537877 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
DDB1-209ENST00000537877 NCOA2Q15596 1464 aa18.96■□□□□ 0.63
DDB1-209ENST00000537877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
DDB1-209ENST00000537877 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
DDB1-209ENST00000537877 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
DDB1-209ENST00000537877 PHLDB1Q86UU1 1377 aa18.93■□□□□ 0.62
DDB1-209ENST00000537877 KIF14Q15058 1648 aa18.92■□□□□ 0.62
DDB1-209ENST00000537877 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
DDB1-209ENST00000537877 PLEKHD1A6NEE1 506 aa18.9■□□□□ 0.62
DDB1-209ENST00000537877 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
DDB1-209ENST00000537877 ITSN2Q9NZM3 1697 aa18.87■□□□□ 0.61
DDB1-209ENST00000537877 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
DDB1-209ENST00000537877 FGD6Q6ZV73 1430 aa18.85■□□□□ 0.61
DDB1-209ENST00000537877 ABCC10Q5T3U5 1492 aa18.83■□□□□ 0.6
DDB1-209ENST00000537877 MIA2Q96PC5 1412 aa18.83■□□□□ 0.6
DDB1-209ENST00000537877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.82■□□□□ 0.6
DDB1-209ENST00000537877 WDR7Q9Y4E6 1490 aa18.81■□□□□ 0.6
DDB1-209ENST00000537877 PTPN23Q9H3S7 1636 aa18.79■□□□□ 0.6
DDB1-209ENST00000537877 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
DDB1-209ENST00000537877 TCOF1Q13428 1488 aaKnown RBP18.78■□□□□ 0.6
DDB1-209ENST00000537877 CDC42BPAQ5VT25 1732 aa18.78■□□□□ 0.6
DDB1-209ENST00000537877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDB1-209ENST00000537877 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.6
DDB1-209ENST00000537877 ASXL2Q76L83 1435 aa18.77■□□□□ 0.59
DDB1-209ENST00000537877 TTC37Q6PGP7 1564 aa18.77■□□□□ 0.59
DDB1-209ENST00000537877 PREX2Q70Z35 1606 aa18.76■□□□□ 0.59
DDB1-209ENST00000537877 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
DDB1-209ENST00000537877 MAPKBP1O60336 1514 aa18.75■□□□□ 0.59
DDB1-209ENST00000537877 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
DDB1-209ENST00000537877 ABCA9Q8IUA7 1624 aa18.72■□□□□ 0.59
DDB1-209ENST00000537877 FAM50AQ14320 339 aaKnown RBP18.7■□□□□ 0.58
DDB1-209ENST00000537877 CDC42BPBQ9Y5S2 1711 aa18.7■□□□□ 0.58
DDB1-209ENST00000537877 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
DDB1-209ENST00000537877 CAMSAP2Q08AD1 1489 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1293.5 ms