RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 BCL11AQ9H165 835 aa20.57■□□□□ 0.88
CDH20-202ENST00000536675 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
CDH20-202ENST00000536675 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
CDH20-202ENST00000536675 NEFLP07196 543 aa20.53■□□□□ 0.88
CDH20-202ENST00000536675 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
CDH20-202ENST00000536675 TRIM52Q96A61 297 aa20.49■□□□□ 0.87
CDH20-202ENST00000536675 PHLDB1Q86UU1 1377 aa20.49■□□□□ 0.87
CDH20-202ENST00000536675 LRRC9Q6ZRR7 1453 aa20.49■□□□□ 0.87
CDH20-202ENST00000536675 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
CDH20-202ENST00000536675 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
CDH20-202ENST00000536675 FAM50AQ14320 339 aaKnown RBP20.44■□□□□ 0.86
CDH20-202ENST00000536675 ANP32CO43423 234 aa20.44■□□□□ 0.86
CDH20-202ENST00000536675 IGF1RP08069 1367 aa20.4■□□□□ 0.86
CDH20-202ENST00000536675 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
CDH20-202ENST00000536675 CFAP43Q8NDM7 1665 aa20.39■□□□□ 0.86
CDH20-202ENST00000536675 CFTRP13569 1480 aa20.37■□□□□ 0.85
CDH20-202ENST00000536675 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
CDH20-202ENST00000536675 MSH5O43196 834 aa20.34■□□□□ 0.85
CDH20-202ENST00000536675 PCF11O94913 1555 aaKnown RBP20.33■□□□□ 0.85
CDH20-202ENST00000536675 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
CDH20-202ENST00000536675 CARMIL1Q5VZK9 1371 aa20.31■□□□□ 0.84
CDH20-202ENST00000536675 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
CDH20-202ENST00000536675 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
CDH20-202ENST00000536675 TONSLQ96HA7 1378 aa20.25■□□□□ 0.83
CDH20-202ENST00000536675 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
CDH20-202ENST00000536675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.24■□□□□ 0.83
CDH20-202ENST00000536675 FANCIQ9NVI1 1328 aa20.22■□□□□ 0.83
CDH20-202ENST00000536675 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDH20-202ENST00000536675 IRX6P78412 446 aaPredicted RBP20.19■□□□□ 0.82
CDH20-202ENST00000536675 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
CDH20-202ENST00000536675 FYCO1Q9BQS8 1478 aa20.18■□□□□ 0.82
CDH20-202ENST00000536675 CDK11AQ9UQ88 783 aaPredicted RBP20.18■□□□□ 0.82
CDH20-202ENST00000536675 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
CDH20-202ENST00000536675 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
CDH20-202ENST00000536675 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
CDH20-202ENST00000536675 UACAQ9BZF9 1416 aa20.14■□□□□ 0.81
CDH20-202ENST00000536675 CASKIN1Q8WXD9 1431 aa20.14■□□□□ 0.81
CDH20-202ENST00000536675 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
CDH20-202ENST00000536675 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
CDH20-202ENST00000536675 PTPRKQ15262 1439 aa20.12■□□□□ 0.81
CDH20-202ENST00000536675 HFM1A2PYH4 1435 aa20.11■□□□□ 0.81
CDH20-202ENST00000536675 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDH20-202ENST00000536675 EFCAB5A4FU69 1503 aa20.09■□□□□ 0.81
CDH20-202ENST00000536675 ERICH6Q7L0X2 663 aa20.09■□□□□ 0.81
CDH20-202ENST00000536675 WASHC2AQ641Q2 1341 aa20.06■□□□□ 0.8
CDH20-202ENST00000536675 ERICH6BQ5W0A0 696 aa20.05■□□□□ 0.8
CDH20-202ENST00000536675 NAIPQ13075 1403 aa20.05■□□□□ 0.8
CDH20-202ENST00000536675 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
CDH20-202ENST00000536675 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
CDH20-202ENST00000536675 CTTNBP2Q8WZ74 1663 aa20.02■□□□□ 0.8
CDH20-202ENST00000536675 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
CDH20-202ENST00000536675 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
CDH20-202ENST00000536675 MTUS2Q5JR59 1369 aa20■□□□□ 0.79
CDH20-202ENST00000536675 CCDC184Q52MB2 194 aa20■□□□□ 0.79
CDH20-202ENST00000536675 LRRIQ1Q96JM4 1722 aa19.99■□□□□ 0.79
CDH20-202ENST00000536675 FMN1Q68DA7 1419 aa19.98■□□□□ 0.79
CDH20-202ENST00000536675 NCOA2Q15596 1464 aa19.98■□□□□ 0.79
CDH20-202ENST00000536675 CNTLNQ9NXG0 1405 aa19.95■□□□□ 0.79
CDH20-202ENST00000536675 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
CDH20-202ENST00000536675 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
CDH20-202ENST00000536675 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
CDH20-202ENST00000536675 CUL7Q14999 1698 aa19.93■□□□□ 0.78
CDH20-202ENST00000536675 B4GALNT3Q6L9W6 998 aa19.93■□□□□ 0.78
CDH20-202ENST00000536675 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
CDH20-202ENST00000536675 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
CDH20-202ENST00000536675 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
CDH20-202ENST00000536675 SUPT6HQ7KZ85 1726 aaKnown RBP19.91■□□□□ 0.78
CDH20-202ENST00000536675 FAM9BQ8IZU0 186 aa19.9■□□□□ 0.78
CDH20-202ENST00000536675 MYT1LQ9UL68 1186 aa19.9■□□□□ 0.78
CDH20-202ENST00000536675 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
CDH20-202ENST00000536675 HECW1Q76N89 1606 aa19.89■□□□□ 0.77
CDH20-202ENST00000536675 C11orf95C9JLR9 678 aaPredicted RBP19.88■□□□□ 0.77
CDH20-202ENST00000536675 ZBED9Q6R2W3 1325 aa19.88■□□□□ 0.77
CDH20-202ENST00000536675 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
CDH20-202ENST00000536675 RRP7BPQ9NSQ0 103 aa19.87■□□□□ 0.77
CDH20-202ENST00000536675 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
CDH20-202ENST00000536675 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
CDH20-202ENST00000536675 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
CDH20-202ENST00000536675 MRS2Q9HD23 443 aa19.86■□□□□ 0.77
CDH20-202ENST00000536675 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
CDH20-202ENST00000536675 NCOA1Q15788 1441 aa19.86■□□□□ 0.77
CDH20-202ENST00000536675 CCDC7Q96M83 1385 aa19.85■□□□□ 0.77
CDH20-202ENST00000536675 DEKP35659 375 aaKnown RBP19.85■□□□□ 0.77
CDH20-202ENST00000536675 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
CDH20-202ENST00000536675 EHBP1L1Q8N3D4 1523 aa19.84■□□□□ 0.77
CDH20-202ENST00000536675 KDM6BO15054 1643 aa19.84■□□□□ 0.77
CDH20-202ENST00000536675 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.77
CDH20-202ENST00000536675 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.77
CDH20-202ENST00000536675 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
CDH20-202ENST00000536675 THOC2Q8NI27 1593 aaKnown RBP19.81■□□□□ 0.76
CDH20-202ENST00000536675 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
CDH20-202ENST00000536675 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
CDH20-202ENST00000536675 NOP58Q9Y2X3 529 aaKnown RBP19.79■□□□□ 0.76
CDH20-202ENST00000536675 MAGI3Q5TCQ9 1506 aa19.78■□□□□ 0.76
CDH20-202ENST00000536675 TCOF1Q13428 1488 aaKnown RBP19.78■□□□□ 0.76
CDH20-202ENST00000536675 MPHOSPH9Q99550 1183 aa19.78■□□□□ 0.76
CDH20-202ENST00000536675 POLR1AO95602 1720 aaPredicted RBP19.77■□□□□ 0.76
CDH20-202ENST00000536675 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
CDH20-202ENST00000536675 AKNAQ7Z591 1439 aa19.75■□□□□ 0.75
CDH20-202ENST00000536675 FOXD1Q16676 465 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms