RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
TNFRSF1A-208ENST00000536194 EEA1Q15075 1411 aa19■□□□□ 0.63
TNFRSF1A-208ENST00000536194 ARAP1Q96P48 1450 aa19■□□□□ 0.63
TNFRSF1A-208ENST00000536194 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
TNFRSF1A-208ENST00000536194 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
TNFRSF1A-208ENST00000536194 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
TNFRSF1A-208ENST00000536194 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
TNFRSF1A-208ENST00000536194 IQGAP2Q13576 1575 aa18.93■□□□□ 0.62
TNFRSF1A-208ENST00000536194 JPH4Q96JJ6 628 aa18.93■□□□□ 0.62
TNFRSF1A-208ENST00000536194 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF1A-208ENST00000536194 KIF21BO75037 1637 aa18.89■□□□□ 0.61
TNFRSF1A-208ENST00000536194 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
TNFRSF1A-208ENST00000536194 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
TNFRSF1A-208ENST00000536194 DISP1Q96F81 1524 aa18.8■□□□□ 0.6
TNFRSF1A-208ENST00000536194 KIAA0556O60303 1618 aa18.77■□□□□ 0.6
TNFRSF1A-208ENST00000536194 CARMIL2Q6F5E8 1435 aa18.74■□□□□ 0.59
TNFRSF1A-208ENST00000536194 GOLGA3Q08378 1498 aa18.73■□□□□ 0.59
TNFRSF1A-208ENST00000536194 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
TNFRSF1A-208ENST00000536194 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
TNFRSF1A-208ENST00000536194 ADCY10Q96PN6 1610 aa18.69■□□□□ 0.58
TNFRSF1A-208ENST00000536194 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
TNFRSF1A-208ENST00000536194 PTPRGP23470 1445 aa18.67■□□□□ 0.58
TNFRSF1A-208ENST00000536194 TTBK1Q5TCY1 1321 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-208ENST00000536194 UBTFP17480 764 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-208ENST00000536194 RANGAP1P46060 587 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-208ENST00000536194 P3H3Q8IVL6 736 aa18.58■□□□□ 0.56
TNFRSF1A-208ENST00000536194 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
TNFRSF1A-208ENST00000536194 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
TNFRSF1A-208ENST00000536194 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
TNFRSF1A-208ENST00000536194 UHRF1BP1LA0JNW5 1464 aa18.57■□□□□ 0.56
TNFRSF1A-208ENST00000536194 PLB1Q6P1J6 1458 aa18.57■□□□□ 0.56
TNFRSF1A-208ENST00000536194 ABCA8O94911 1581 aa18.56■□□□□ 0.56
TNFRSF1A-208ENST00000536194 FHOD3Q2V2M9 1422 aa18.54■□□□□ 0.56
TNFRSF1A-208ENST00000536194 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.55
TNFRSF1A-208ENST00000536194 MAPKBP1O60336 1514 aa18.51■□□□□ 0.55
TNFRSF1A-208ENST00000536194 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-208ENST00000536194 KDM5BQ9UGL1 1544 aa18.49■□□□□ 0.55
TNFRSF1A-208ENST00000536194 RAPGEF6Q8TEU7 1601 aa18.48■□□□□ 0.55
TNFRSF1A-208ENST00000536194 KIF13AQ9H1H9 1805 aa18.47■□□□□ 0.55
TNFRSF1A-208ENST00000536194 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
TNFRSF1A-208ENST00000536194 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-208ENST00000536194 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
TNFRSF1A-208ENST00000536194 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
TNFRSF1A-208ENST00000536194 ASXL2Q76L83 1435 aa18.41■□□□□ 0.54
TNFRSF1A-208ENST00000536194 NUP153P49790 1475 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-208ENST00000536194 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.54
TNFRSF1A-208ENST00000536194 CLIP1P30622 1438 aa18.39■□□□□ 0.53
TNFRSF1A-208ENST00000536194 ATP10BO94823 1461 aa18.38■□□□□ 0.53
TNFRSF1A-208ENST00000536194 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
TNFRSF1A-208ENST00000536194 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
TNFRSF1A-208ENST00000536194 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
TNFRSF1A-208ENST00000536194 LRRIQ1Q96JM4 1722 aa18.34■□□□□ 0.53
TNFRSF1A-208ENST00000536194 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
TNFRSF1A-208ENST00000536194 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-208ENST00000536194 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
TNFRSF1A-208ENST00000536194 GLI2P10070 1586 aa18.3■□□□□ 0.52
TNFRSF1A-208ENST00000536194 EPRSP07814 1512 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1A-208ENST00000536194 FAM69CQ0P6D2 419 aa18.3■□□□□ 0.52
TNFRSF1A-208ENST00000536194 CDK13Q14004 1512 aaKnown RBP18.29■□□□□ 0.52
TNFRSF1A-208ENST00000536194 TSPOAP1O95153 1857 aa18.28■□□□□ 0.52
TNFRSF1A-208ENST00000536194 MAP3K4Q9Y6R4 1608 aa18.27■□□□□ 0.51
TNFRSF1A-208ENST00000536194 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-208ENST00000536194 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
TNFRSF1A-208ENST00000536194 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
TNFRSF1A-208ENST00000536194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-208ENST00000536194 HNRNPUL2Q1KMD3 747 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1A-208ENST00000536194 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-208ENST00000536194 CFAP43Q8NDM7 1665 aa18.21■□□□□ 0.51
TNFRSF1A-208ENST00000536194 KCNH8Q96L42 1107 aa18.19■□□□□ 0.5
TNFRSF1A-208ENST00000536194 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
TNFRSF1A-208ENST00000536194 CCDC18Q5T9S5 1454 aa18.16■□□□□ 0.5
TNFRSF1A-208ENST00000536194 MAGI3Q5TCQ9 1506 aa18.14■□□□□ 0.49
TNFRSF1A-208ENST00000536194 PLEKHD1A6NEE1 506 aa18.14■□□□□ 0.49
TNFRSF1A-208ENST00000536194 CD109Q6YHK3 1445 aa18.13■□□□□ 0.49
TNFRSF1A-208ENST00000536194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
TNFRSF1A-208ENST00000536194 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
TNFRSF1A-208ENST00000536194 VPS8Q8N3P4 1428 aa18.12■□□□□ 0.49
TNFRSF1A-208ENST00000536194 KIF14Q15058 1648 aa18.12■□□□□ 0.49
TNFRSF1A-208ENST00000536194 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-208ENST00000536194 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
TNFRSF1A-208ENST00000536194 KDM6BO15054 1643 aa18.07■□□□□ 0.48
TNFRSF1A-208ENST00000536194 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1A-208ENST00000536194 COL17A1Q9UMD9 1497 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-208ENST00000536194 TIAM1Q13009 1591 aa18.03■□□□□ 0.48
TNFRSF1A-208ENST00000536194 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
TNFRSF1A-208ENST00000536194 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
TNFRSF1A-208ENST00000536194 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
TNFRSF1A-208ENST00000536194 CDC42BPBQ9Y5S2 1711 aa17.98■□□□□ 0.47
TNFRSF1A-208ENST00000536194 NEO1Q92859 1461 aa17.97■□□□□ 0.47
TNFRSF1A-208ENST00000536194 PREX2Q70Z35 1606 aa17.97■□□□□ 0.47
TNFRSF1A-208ENST00000536194 PLCH2O75038 1416 aa17.97■□□□□ 0.47
TNFRSF1A-208ENST00000536194 FANCAO15360 1455 aa17.96■□□□□ 0.47
TNFRSF1A-208ENST00000536194 ARAP3Q8WWN8 1544 aa17.96■□□□□ 0.47
TNFRSF1A-208ENST00000536194 CFAP74Q9C0B2 1584 aa17.96■□□□□ 0.46
TNFRSF1A-208ENST00000536194 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
TNFRSF1A-208ENST00000536194 MAP3K1Q13233 1512 aa17.95■□□□□ 0.46
TNFRSF1A-208ENST00000536194 FRMPD1Q5SYB0 1578 aa17.92■□□□□ 0.46
TNFRSF1A-208ENST00000536194 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
TNFRSF1A-208ENST00000536194 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
TNFRSF1A-208ENST00000536194 SUPT6HQ7KZ85 1726 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms