RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
MDM2-223ENST00000536089 C7P10643 843 aa9.83□□□□□ -0.84
MDM2-223ENST00000536089 ASTLQ6HA08 431 aaPredicted RBP9.83□□□□□ -0.84
MDM2-223ENST00000536089 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
MDM2-223ENST00000536089 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
MDM2-223ENST00000536089 MIER1Q8N108 512 aa9.82□□□□□ -0.84
MDM2-223ENST00000536089 MS4A3Q96HJ5 214 aa9.82□□□□□ -0.84
MDM2-223ENST00000536089 ZBTB47Q9UFB7 747 aaPredicted RBP9.82□□□□□ -0.84
MDM2-223ENST00000536089 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
MDM2-223ENST00000536089 KLHL34Q8N239 644 aa9.8□□□□□ -0.84
MDM2-223ENST00000536089 CCDC61Q9Y6R9 512 aa9.8□□□□□ -0.84
MDM2-223ENST00000536089 ATMINO43313 823 aaPredicted RBP9.78□□□□□ -0.84
MDM2-223ENST00000536089 DCAF8L2P0C7V8 631 aa9.78□□□□□ -0.84
MDM2-223ENST00000536089 METRNQ9UJH8 293 aa9.78□□□□□ -0.84
MDM2-223ENST00000536089 OTUD5Q96G74 571 aa9.77□□□□□ -0.85
MDM2-223ENST00000536089 PLCD3Q8N3E9 789 aa9.76□□□□□ -0.85
MDM2-223ENST00000536089 PELP1Q8IZL8 1130 aaKnown RBP9.74□□□□□ -0.85
MDM2-223ENST00000536089 KIF12Q96FN5 646 aa9.74□□□□□ -0.85
MDM2-223ENST00000536089 POTEB2H3BUK9 544 aa9.72□□□□□ -0.85
MDM2-223ENST00000536089 TIE1P35590 1138 aa9.71□□□□□ -0.86
MDM2-223ENST00000536089 SGIP1Q9BQI5 828 aa9.71□□□□□ -0.86
MDM2-223ENST00000536089 SPOCK2Q92563 424 aa9.7□□□□□ -0.86
MDM2-223ENST00000536089 SCUBE2Q9NQ36 999 aa9.7□□□□□ -0.86
MDM2-223ENST00000536089 MAP3K13O43283 966 aa9.67□□□□□ -0.86
MDM2-223ENST00000536089 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
MDM2-223ENST00000536089 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
MDM2-223ENST00000536089 BMP2KQ9NSY1 1161 aaPredicted RBP9.65□□□□□ -0.86
MDM2-223ENST00000536089 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
MDM2-223ENST00000536089 PKD2Q13563 968 aa9.63□□□□□ -0.87
MDM2-223ENST00000536089 PCDH10Q9P2E7 1040 aa9.63□□□□□ -0.87
MDM2-223ENST00000536089 PLSCR2Q9NRY7 297 aa9.62□□□□□ -0.87
MDM2-223ENST00000536089 POTEMA6NI47 508 aa9.61□□□□□ -0.87
MDM2-223ENST00000536089 SEC24BO95487 1268 aa9.61□□□□□ -0.87
MDM2-223ENST00000536089 IER5LQ5T953 404 aa9.61□□□□□ -0.87
MDM2-223ENST00000536089 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
MDM2-223ENST00000536089 ECM2O94769 699 aaPredicted RBP9.6□□□□□ -0.87
MDM2-223ENST00000536089 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
MDM2-223ENST00000536089 NUBP1P53384 320 aa9.58□□□□□ -0.88
MDM2-223ENST00000536089 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
MDM2-223ENST00000536089 PLCB2Q00722 1185 aa9.56□□□□□ -0.88
MDM2-223ENST00000536089 POTEJP0CG39 1038 aa9.54□□□□□ -0.88
MDM2-223ENST00000536089 CIZ1Q9ULV3 898 aaPredicted RBP9.54□□□□□ -0.88
MDM2-223ENST00000536089 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
MDM2-223ENST00000536089 TRPC6Q9Y210 931 aa9.53□□□□□ -0.88
MDM2-223ENST00000536089 HAP1P54257 671 aaPredicted RBP9.52□□□□□ -0.89
MDM2-223ENST00000536089 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
MDM2-223ENST00000536089 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
MDM2-223ENST00000536089 DCAF8Q5TAQ9 597 aa9.48□□□□□ -0.89
MDM2-223ENST00000536089 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
MDM2-223ENST00000536089 TMEM106CQ9BVX2 250 aa9.48□□□□□ -0.89
MDM2-223ENST00000536089 PLCG2P16885 1265 aa9.47□□□□□ -0.89
MDM2-223ENST00000536089 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
MDM2-223ENST00000536089 COLQQ9Y215 455 aaPredicted RBP9.46□□□□□ -0.9
MDM2-223ENST00000536089 RGL2O15211 777 aa9.43□□□□□ -0.9
MDM2-223ENST00000536089 GSE1Q14687 1217 aa9.43□□□□□ -0.9
MDM2-223ENST00000536089 BBXQ8WY36 941 aaPredicted RBP9.42□□□□□ -0.9
MDM2-223ENST00000536089 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
MDM2-223ENST00000536089 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
MDM2-223ENST00000536089 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
MDM2-223ENST00000536089 PYGBP11216 843 aa9.38□□□□□ -0.91
MDM2-223ENST00000536089 SLAIN1Q8ND83 568 aa9.38□□□□□ -0.91
MDM2-223ENST00000536089 TRIM41Q8WV44 630 aa9.38□□□□□ -0.91
MDM2-223ENST00000536089 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
MDM2-223ENST00000536089 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
MDM2-223ENST00000536089 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
MDM2-223ENST00000536089 SNPHO15079 494 aa9.36□□□□□ -0.91
MDM2-223ENST00000536089 CHGAP10645 457 aaKnown RBP9.35□□□□□ -0.91
MDM2-223ENST00000536089 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
MDM2-223ENST00000536089 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
MDM2-223ENST00000536089 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.32□□□□□ -0.92
MDM2-223ENST00000536089 PCDHB8Q9UN66 801 aa9.31□□□□□ -0.92
MDM2-223ENST00000536089 MKRN3Q13064 507 aaKnown RBP9.3□□□□□ -0.92
MDM2-223ENST00000536089 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
MDM2-223ENST00000536089 TMEM121BQ9BXQ6 578 aaPredicted RBP9.3□□□□□ -0.92
MDM2-223ENST00000536089 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
MDM2-223ENST00000536089 L3MBTL3Q96JM7 780 aaPredicted RBP9.29□□□□□ -0.92
MDM2-223ENST00000536089 CDAN1Q8IWY9 1227 aa9.27□□□□□ -0.93
MDM2-223ENST00000536089 TAOK2Q9UL54 1235 aa9.27□□□□□ -0.93
MDM2-223ENST00000536089 ST18O60284 1047 aa9.26□□□□□ -0.93
MDM2-223ENST00000536089 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
MDM2-223ENST00000536089 PSEN1P49768 467 aa9.23□□□□□ -0.93
MDM2-223ENST00000536089 RIOK3O14730 519 aaKnown RBP9.22□□□□□ -0.93
MDM2-223ENST00000536089 PDAP1Q13442 181 aaKnown RBP9.22□□□□□ -0.93
MDM2-223ENST00000536089 HS6ST3Q8IZP7 471 aa9.21□□□□□ -0.94
MDM2-223ENST00000536089 BCANQ96GW7 911 aa9.21□□□□□ -0.94
MDM2-223ENST00000536089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.946e-12■■□□□ 11.5
MDM2-223ENST00000536089 PDCD7Q8N8D1 485 aaKnown RBP9.19□□□□□ -0.94
MDM2-223ENST00000536089 RNF25Q96BH1 459 aaPredicted RBP9.19□□□□□ -0.94
MDM2-223ENST00000536089 G3V3G9 751 aa9.18□□□□□ -0.94
MDM2-223ENST00000536089 STK25O00506 426 aa9.16□□□□□ -0.94
MDM2-223ENST00000536089 VGFO15240 615 aaPredicted RBP9.16□□□□□ -0.94
MDM2-223ENST00000536089 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
MDM2-223ENST00000536089 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
MDM2-223ENST00000536089 ILDR1Q86SU0 546 aaPredicted RBP9.12□□□□□ -0.95
MDM2-223ENST00000536089 STK24Q9Y6E0 443 aa9.11□□□□□ -0.95
MDM2-223ENST00000536089 CABP2Q9NPB3 220 aa9.09□□□□□ -0.95
MDM2-223ENST00000536089 EMP3P54852 163 aa9.08□□□□□ -0.96
MDM2-223ENST00000536089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.07□□□□□ -0.96
MDM2-223ENST00000536089 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
MDM2-223ENST00000536089 BCL11BQ9C0K0 894 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms