RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
CPSF7-214ENST00000535222 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
CPSF7-214ENST00000535222 PRG4Q92954 1404 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-214ENST00000535222 ABCA5Q8WWZ7 1642 aa14.59□□□□□ -0.07
CPSF7-214ENST00000535222 CUX1P39880 1505 aa14.59□□□□□ -0.07
CPSF7-214ENST00000535222 ABCA10Q8WWZ4 1543 aa14.58□□□□□ -0.08
CPSF7-214ENST00000535222 JPH4Q96JJ6 628 aa14.58□□□□□ -0.08
CPSF7-214ENST00000535222 TSPOAP1O95153 1857 aa14.58□□□□□ -0.08
CPSF7-214ENST00000535222 COL17A1Q9UMD9 1497 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-214ENST00000535222 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
CPSF7-214ENST00000535222 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
CPSF7-214ENST00000535222 ADAMTS12P58397 1594 aa14.52□□□□□ -0.08
CPSF7-214ENST00000535222 FHAD1B1AJZ9 1412 aa14.51□□□□□ -0.09
CPSF7-214ENST00000535222 PPRC1Q5VV67 1664 aaKnown RBP14.51□□□□□ -0.09
CPSF7-214ENST00000535222 CHIC1Q5VXU3 224 aa14.5□□□□□ -0.09
CPSF7-214ENST00000535222 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
CPSF7-214ENST00000535222 GLI2P10070 1586 aa14.49□□□□□ -0.09
CPSF7-214ENST00000535222 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
CPSF7-214ENST00000535222 CERKQ8TCT0 537 aa14.39□□□□□ -0.11
CPSF7-214ENST00000535222 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
CPSF7-214ENST00000535222 ASXL2Q76L83 1435 aa14.37□□□□□ -0.11
CPSF7-214ENST00000535222 TEX14Q8IWB6 1497 aa14.35□□□□□ -0.11
CPSF7-214ENST00000535222 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
CPSF7-214ENST00000535222 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
CPSF7-214ENST00000535222 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
CPSF7-214ENST00000535222 MAP3K4Q9Y6R4 1608 aa14.31□□□□□ -0.12
CPSF7-214ENST00000535222 PTPRMP28827 1452 aa14.31□□□□□ -0.12
CPSF7-214ENST00000535222 EPRSP07814 1512 aaKnown RBP14.29□□□□□ -0.12
CPSF7-214ENST00000535222 PCF11O94913 1555 aaKnown RBP14.29□□□□□ -0.12
CPSF7-214ENST00000535222 PTPRGP23470 1445 aa14.28□□□□□ -0.12
CPSF7-214ENST00000535222 SPATA31D1Q6ZQQ2 1576 aa14.28□□□□□ -0.12
CPSF7-214ENST00000535222 UHRF1BP1LA0JNW5 1464 aa14.26□□□□□ -0.13
CPSF7-214ENST00000535222 KIAA0586Q9BVV6 1533 aa14.25□□□□□ -0.13
CPSF7-214ENST00000535222 ADAMTSL3P82987 1691 aa14.24□□□□□ -0.13
CPSF7-214ENST00000535222 MAGI3Q5TCQ9 1506 aa14.18□□□□□ -0.14
CPSF7-214ENST00000535222 KDM5BQ9UGL1 1544 aa14.18□□□□□ -0.14
CPSF7-214ENST00000535222 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
CPSF7-214ENST00000535222 KIF21BO75037 1637 aa14.17□□□□□ -0.14
CPSF7-214ENST00000535222 UACAQ9BZF9 1416 aa14.15□□□□□ -0.14
CPSF7-214ENST00000535222 CUL7Q14999 1698 aa14.14□□□□□ -0.15
CPSF7-214ENST00000535222 HSPA2P54652 639 aa14.12□□□□□ -0.15
CPSF7-214ENST00000535222 ARAP3Q8WWN8 1544 aa14.11□□□□□ -0.15
CPSF7-214ENST00000535222 CARMIL2Q6F5E8 1435 aa14.09□□□□□ -0.15
CPSF7-214ENST00000535222 CD109Q6YHK3 1445 aa14.09□□□□□ -0.15
CPSF7-214ENST00000535222 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.15
CPSF7-214ENST00000535222 BCORL1Q5H9F3 1711 aa14.06□□□□□ -0.16
CPSF7-214ENST00000535222 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
CPSF7-214ENST00000535222 MADDQ8WXG6 1647 aa14.04□□□□□ -0.16
CPSF7-214ENST00000535222 CFAP43Q8NDM7 1665 aa14.03□□□□□ -0.16
CPSF7-214ENST00000535222 ZCCHC11Q5TAX3 1644 aaKnown RBP14.02□□□□□ -0.16
CPSF7-214ENST00000535222 IGF1RP08069 1367 aa14.01□□□□□ -0.17
CPSF7-214ENST00000535222 PHLDB1Q86UU1 1377 aa14.01□□□□□ -0.17
CPSF7-214ENST00000535222 TTBK1Q5TCY1 1321 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-214ENST00000535222 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
CPSF7-214ENST00000535222 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
CPSF7-214ENST00000535222 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
CPSF7-214ENST00000535222 DISP1Q96F81 1524 aa13.97□□□□□ -0.17
CPSF7-214ENST00000535222 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
CPSF7-214ENST00000535222 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-214ENST00000535222 RAPGEF3O95398 923 aa13.91□□□□□ -0.18
CPSF7-214ENST00000535222 LTBP4Q8N2S1 1624 aa13.9□□□□□ -0.18
CPSF7-214ENST00000535222 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
CPSF7-214ENST00000535222 STRCQ7RTU9 1775 aa13.9□□□□□ -0.18
CPSF7-214ENST00000535222 PTPRTO14522 1441 aa13.9□□□□□ -0.19
CPSF7-214ENST00000535222 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
CPSF7-214ENST00000535222 NEO1Q92859 1461 aa13.85□□□□□ -0.19
CPSF7-214ENST00000535222 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
CPSF7-214ENST00000535222 FRMPD1Q5SYB0 1578 aa13.83□□□□□ -0.19
CPSF7-214ENST00000535222 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
CPSF7-214ENST00000535222 POGZQ7Z3K3 1410 aa13.82□□□□□ -0.2
CPSF7-214ENST00000535222 TTC37Q6PGP7 1564 aa13.81□□□□□ -0.2
CPSF7-214ENST00000535222 PREX1Q8TCU6 1659 aa13.8□□□□□ -0.2
CPSF7-214ENST00000535222 KIF27Q86VH2 1401 aa13.8□□□□□ -0.2
CPSF7-214ENST00000535222 ARHGEF40Q8TER5 1519 aa13.8□□□□□ -0.2
CPSF7-214ENST00000535222 FANCAO15360 1455 aa13.78□□□□□ -0.2
CPSF7-214ENST00000535222 MED1Q15648 1581 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-214ENST00000535222 KIAA0556O60303 1618 aa13.78□□□□□ -0.2
CPSF7-214ENST00000535222 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
CPSF7-214ENST00000535222 ABCA9Q8IUA7 1624 aa13.77□□□□□ -0.21
CPSF7-214ENST00000535222 ABCA8O94911 1581 aa13.76□□□□□ -0.21
CPSF7-214ENST00000535222 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
CPSF7-214ENST00000535222 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
CPSF7-214ENST00000535222 AKNAQ7Z591 1439 aa13.73□□□□□ -0.21
CPSF7-214ENST00000535222 UBAP1LF5GYI3 381 aa13.73□□□□□ -0.21
CPSF7-214ENST00000535222 SIGLEC1Q9BZZ2 1709 aa13.72□□□□□ -0.21
CPSF7-214ENST00000535222 ARHGEF12Q9NZN5 1544 aa13.71□□□□□ -0.21
CPSF7-214ENST00000535222 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.22
CPSF7-214ENST00000535222 DENND4BO75064 1496 aaPredicted RBP13.7□□□□□ -0.22
CPSF7-214ENST00000535222 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
CPSF7-214ENST00000535222 FER1L4A9Z1Z3 1794 aa13.69□□□□□ -0.22
CPSF7-214ENST00000535222 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
CPSF7-214ENST00000535222 RICTORQ6R327 1708 aa13.68□□□□□ -0.22
CPSF7-214ENST00000535222 HSPA1LP34931 641 aa13.68□□□□□ -0.22
CPSF7-214ENST00000535222 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
CPSF7-214ENST00000535222 SRCAPQ6ZRS2 3230 aa13.67□□□□□ -0.22
CPSF7-214ENST00000535222 ATP10BO94823 1461 aa13.67□□□□□ -0.22
CPSF7-214ENST00000535222 NCOA1Q15788 1441 aa13.66□□□□□ -0.22
CPSF7-214ENST00000535222 MLECQ14165 292 aa13.64□□□□□ -0.23
CPSF7-214ENST00000535222 EFCAB5A4FU69 1503 aa13.64□□□□□ -0.23
CPSF7-214ENST00000535222 ZFYVE16Q7Z3T8 1539 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms