RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 RIMBP3BA6NNM3 1639 aa34.23■■■■□ 3.07
CHFR-209ENST00000535181 SHROOM2Q13796 1616 aa34.23■■■■□ 3.07
CHFR-209ENST00000535181 RIMBP3Q9UFD9 1639 aa34.23■■■■□ 3.07
CHFR-209ENST00000535181 FAM9AQ8IZU1 332 aaPredicted RBP34.11■■■■□ 3.05
CHFR-209ENST00000535181 KIF21BO75037 1637 aa34.1■■■■□ 3.05
CHFR-209ENST00000535181 IQGAP2Q13576 1575 aa34.08■■■■□ 3.05
CHFR-209ENST00000535181 JPH4Q96JJ6 628 aa34.08■■■■□ 3.05
CHFR-209ENST00000535181 CTTNBP2Q8WZ74 1663 aa34.06■■■■□ 3.04
CHFR-209ENST00000535181 ARAP1Q96P48 1450 aa34.01■■■■□ 3.04
CHFR-209ENST00000535181 PRG4Q92954 1404 aaPredicted RBP34■■■■□ 3.03
CHFR-209ENST00000535181 ERCC6L2Q5T890 1561 aa33.99■■■■□ 3.03
CHFR-209ENST00000535181 UGGT2Q9NYU1 1516 aa33.93■■■■□ 3.02
CHFR-209ENST00000535181 GOLGA3Q08378 1498 aa33.88■■■■□ 3.01
CHFR-209ENST00000535181 CARMIL2Q6F5E8 1435 aa33.84■■■■□ 3.01
CHFR-209ENST00000535181 CYB5RLQ6IPT4 315 aa33.83■■■■□ 3.01
CHFR-209ENST00000535181 DISP1Q96F81 1524 aa33.81■■■■□ 3
CHFR-209ENST00000535181 KIAA0556O60303 1618 aa33.76■■■■□ 3
CHFR-209ENST00000535181 TNIKQ9UKE5 1360 aa33.71■■■□□ 2.99
CHFR-209ENST00000535181 SAMD9Q5K651 1589 aa33.65■■■□□ 2.98
CHFR-209ENST00000535181 UBTFP17480 764 aaKnown RBP33.65■■■□□ 2.98
CHFR-209ENST00000535181 PTPRGP23470 1445 aa33.63■■■□□ 2.97
CHFR-209ENST00000535181 EHMT2Q96KQ7 1210 aa33.57■■■□□ 2.96
CHFR-209ENST00000535181 EFCAB5A4FU69 1503 aa33.56■■■□□ 2.96
CHFR-209ENST00000535181 ADCY10Q96PN6 1610 aa33.5■■■□□ 2.95
CHFR-209ENST00000535181 UHRF1BP1LA0JNW5 1464 aa33.46■■■□□ 2.95
CHFR-209ENST00000535181 UACAQ9BZF9 1416 aa33.45■■■□□ 2.95
CHFR-209ENST00000535181 TTBK1Q5TCY1 1321 aaPredicted RBP33.41■■■□□ 2.94
CHFR-209ENST00000535181 ABCC2Q92887 1545 aa33.41■■■□□ 2.94
CHFR-209ENST00000535181 RANGAP1P46060 587 aaPredicted RBP33.39■■■□□ 2.94
CHFR-209ENST00000535181 P3H3Q8IVL6 736 aa33.38■■■□□ 2.93
CHFR-209ENST00000535181 ABCA8O94911 1581 aa33.38■■■□□ 2.93
CHFR-209ENST00000535181 ARHGAP35Q9NRY4 1499 aa33.37■■■□□ 2.93
CHFR-209ENST00000535181 FHOD3Q2V2M9 1422 aa33.36■■■□□ 2.93
CHFR-209ENST00000535181 PLB1Q6P1J6 1458 aa33.34■■■□□ 2.93
CHFR-209ENST00000535181 MAPKBP1O60336 1514 aa33.28■■■□□ 2.92
CHFR-209ENST00000535181 KDM5BQ9UGL1 1544 aa33.28■■■□□ 2.92
CHFR-209ENST00000535181 NPM1P06748 294 aaKnown RBP eCLIP33.28■■■□□ 2.92
CHFR-209ENST00000535181 CLIP1P30622 1438 aa33.24■■■□□ 2.91
CHFR-209ENST00000535181 RAPGEF6Q8TEU7 1601 aa33.24■■■□□ 2.91
CHFR-209ENST00000535181 FMN1Q68DA7 1419 aa33.21■■■□□ 2.91
CHFR-209ENST00000535181 LOC105371045A0A1W2PR82 267 aa33.21■■■□□ 2.91
CHFR-209ENST00000535181 ZCCHC11Q5TAX3 1644 aaKnown RBP33.18■■■□□ 2.9
CHFR-209ENST00000535181 CEP162Q5TB80 1403 aa33.17■■■□□ 2.9
CHFR-209ENST00000535181 NUP153P49790 1475 aaKnown RBP33.11■■■□□ 2.89
CHFR-209ENST00000535181 ASXL2Q76L83 1435 aa33.08■■■□□ 2.89
CHFR-209ENST00000535181 ATP10BO94823 1461 aa33.06■■■□□ 2.88
CHFR-209ENST00000535181 ABCC10Q5T3U5 1492 aa33.05■■■□□ 2.88
CHFR-209ENST00000535181 HECW1Q76N89 1606 aa33.03■■■□□ 2.88
CHFR-209ENST00000535181 TRHP20396 242 aaPredicted RBP33.02■■■□□ 2.88
CHFR-209ENST00000535181 DIP2BQ9P265 1576 aa33.01■■■□□ 2.88
CHFR-209ENST00000535181 KIF13AQ9H1H9 1805 aa33■■■□□ 2.87
CHFR-209ENST00000535181 WDR7Q9Y4E6 1490 aa32.99■■■□□ 2.87
CHFR-209ENST00000535181 CASKIN1Q8WXD9 1431 aa32.98■■■□□ 2.87
CHFR-209ENST00000535181 PCF11O94913 1555 aaKnown RBP32.96■■■□□ 2.87
CHFR-209ENST00000535181 FYCO1Q9BQS8 1478 aa32.93■■■□□ 2.86
CHFR-209ENST00000535181 GLI2P10070 1586 aa32.92■■■□□ 2.86
CHFR-209ENST00000535181 EPRSP07814 1512 aaKnown RBP32.92■■■□□ 2.86
CHFR-209ENST00000535181 ARID3CA6NKF2 412 aa32.9■■■□□ 2.86
CHFR-209ENST00000535181 FAM69CQ0P6D2 419 aa32.87■■■□□ 2.85
CHFR-209ENST00000535181 CDK13Q14004 1512 aaKnown RBP32.87■■■□□ 2.85
CHFR-209ENST00000535181 CCDC18Q5T9S5 1454 aa32.85■■■□□ 2.85
CHFR-209ENST00000535181 LRRIQ1Q96JM4 1722 aa32.84■■■□□ 2.85
CHFR-209ENST00000535181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.83■■■□□ 2.85
CHFR-209ENST00000535181 HNRNPUL2Q1KMD3 747 aaKnown RBP32.83■■■□□ 2.85
CHFR-209ENST00000535181 ATP1B4Q9UN42 357 aaPredicted RBP32.81■■■□□ 2.84
CHFR-209ENST00000535181 VPS8Q8N3P4 1428 aa32.77■■■□□ 2.84
CHFR-209ENST00000535181 PLEKHD1A6NEE1 506 aa32.76■■■□□ 2.83
CHFR-209ENST00000535181 MAP3K4Q9Y6R4 1608 aa32.76■■■□□ 2.83
CHFR-209ENST00000535181 CDK11AQ9UQ88 783 aaPredicted RBP32.73■■■□□ 2.83
CHFR-209ENST00000535181 CFAP43Q8NDM7 1665 aa32.72■■■□□ 2.83
CHFR-209ENST00000535181 KCNH8Q96L42 1107 aa32.7■■■□□ 2.83
CHFR-209ENST00000535181 ABCA9Q8IUA7 1624 aa32.69■■■□□ 2.82
CHFR-209ENST00000535181 TROQ12816 1431 aaPredicted RBP32.66■■■□□ 2.82
CHFR-209ENST00000535181 PPRC1Q5VV67 1664 aaKnown RBP32.65■■■□□ 2.82
CHFR-209ENST00000535181 TSPOAP1O95153 1857 aa32.63■■■□□ 2.81
CHFR-209ENST00000535181 CD109Q6YHK3 1445 aa32.61■■■□□ 2.81
CHFR-209ENST00000535181 MAGI3Q5TCQ9 1506 aa32.61■■■□□ 2.81
CHFR-209ENST00000535181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.58■■■□□ 2.81
CHFR-209ENST00000535181 TEX14Q8IWB6 1497 aa32.58■■■□□ 2.81
CHFR-209ENST00000535181 KIF14Q15058 1648 aa32.57■■■□□ 2.8
CHFR-209ENST00000535181 TTC37Q6PGP7 1564 aa32.53■■■□□ 2.8
CHFR-209ENST00000535181 MAP3K1Q13233 1512 aa32.53■■■□□ 2.8
CHFR-209ENST00000535181 TIAM1Q13009 1591 aa32.52■■■□□ 2.8
CHFR-209ENST00000535181 EHBP1L1Q8N3D4 1523 aa32.47■■■□□ 2.79
CHFR-209ENST00000535181 MTUS2Q5JR59 1369 aa32.45■■■□□ 2.79
CHFR-209ENST00000535181 ARAP3Q8WWN8 1544 aa32.42■■■□□ 2.78
CHFR-209ENST00000535181 MYO5CQ9NQX4 1742 aa32.41■■■□□ 2.78
CHFR-209ENST00000535181 PHLDB1Q86UU1 1377 aa32.4■■■□□ 2.78
CHFR-209ENST00000535181 PLCH2O75038 1416 aa32.4■■■□□ 2.78
CHFR-209ENST00000535181 NEO1Q92859 1461 aa32.4■■■□□ 2.78
CHFR-209ENST00000535181 KDM6BO15054 1643 aa32.39■■■□□ 2.78
CHFR-209ENST00000535181 CFAP74Q9C0B2 1584 aa32.37■■■□□ 2.77
CHFR-209ENST00000535181 LRRC9Q6ZRR7 1453 aa32.36■■■□□ 2.77
CHFR-209ENST00000535181 FANCAO15360 1455 aa32.33■■■□□ 2.77
CHFR-209ENST00000535181 PREX2Q70Z35 1606 aa32.32■■■□□ 2.76
CHFR-209ENST00000535181 APLP2Q06481 763 aa32.3■■■□□ 2.76
CHFR-209ENST00000535181 SUPT6HQ7KZ85 1726 aaKnown RBP32.3■■■□□ 2.76
CHFR-209ENST00000535181 CDC42BPAQ5VT25 1732 aa32.29■■■□□ 2.76
CHFR-209ENST00000535181 COL17A1Q9UMD9 1497 aaPredicted RBP32.28■■■□□ 2.76
CHFR-209ENST00000535181 CDC42BPBQ9Y5S2 1711 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms