RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
SORL1-213ENST00000534754 FBLN2P98095 1184 aa13.62□□□□□ -0.23
SORL1-213ENST00000534754 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
SORL1-213ENST00000534754 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
SORL1-213ENST00000534754 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
SORL1-213ENST00000534754 MYT1Q01538 1121 aa13.59□□□□□ -0.23
SORL1-213ENST00000534754 CLASP1Q7Z460 1538 aa13.58□□□□□ -0.24
SORL1-213ENST00000534754 NUP160Q12769 1436 aa13.58□□□□□ -0.24
SORL1-213ENST00000534754 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
SORL1-213ENST00000534754 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
SORL1-213ENST00000534754 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
SORL1-213ENST00000534754 CENPBP07199 599 aaPredicted RBP13.55□□□□□ -0.24
SORL1-213ENST00000534754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
SORL1-213ENST00000534754 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
SORL1-213ENST00000534754 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
SORL1-213ENST00000534754 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
SORL1-213ENST00000534754 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
SORL1-213ENST00000534754 DIEXFQ68CQ4 756 aaKnown RBP13.5□□□□□ -0.25
SORL1-213ENST00000534754 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
SORL1-213ENST00000534754 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
SORL1-213ENST00000534754 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SORL1-213ENST00000534754 RIMBP3CA6NJZ7 1639 aa13.43□□□□□ -0.26
SORL1-213ENST00000534754 RIMBP3BA6NNM3 1639 aa13.43□□□□□ -0.26
SORL1-213ENST00000534754 RIMBP3Q9UFD9 1639 aa13.43□□□□□ -0.26
SORL1-213ENST00000534754 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
SORL1-213ENST00000534754 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
SORL1-213ENST00000534754 SAMD9Q5K651 1589 aa13.4□□□□□ -0.26
SORL1-213ENST00000534754 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
SORL1-213ENST00000534754 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
SORL1-213ENST00000534754 DISP1Q96F81 1524 aa13.39□□□□□ -0.27
SORL1-213ENST00000534754 JPH4Q96JJ6 628 aa13.38□□□□□ -0.27
SORL1-213ENST00000534754 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
SORL1-213ENST00000534754 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
SORL1-213ENST00000534754 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
SORL1-213ENST00000534754 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
SORL1-213ENST00000534754 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
SORL1-213ENST00000534754 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
SORL1-213ENST00000534754 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
SORL1-213ENST00000534754 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
SORL1-213ENST00000534754 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
SORL1-213ENST00000534754 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
SORL1-213ENST00000534754 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.28
SORL1-213ENST00000534754 CLIP1P30622 1438 aa13.27□□□□□ -0.29
SORL1-213ENST00000534754 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
SORL1-213ENST00000534754 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
SORL1-213ENST00000534754 LRRIQ1Q96JM4 1722 aa13.24□□□□□ -0.29
SORL1-213ENST00000534754 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
SORL1-213ENST00000534754 ABCA8O94911 1581 aa13.22□□□□□ -0.29
SORL1-213ENST00000534754 PTPRGP23470 1445 aa13.21□□□□□ -0.29
SORL1-213ENST00000534754 PLB1Q6P1J6 1458 aa13.21□□□□□ -0.3
SORL1-213ENST00000534754 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
SORL1-213ENST00000534754 PCF11O94913 1555 aaKnown RBP13.2□□□□□ -0.3
SORL1-213ENST00000534754 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
SORL1-213ENST00000534754 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
SORL1-213ENST00000534754 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
SORL1-213ENST00000534754 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.3
SORL1-213ENST00000534754 UACAQ9BZF9 1416 aa13.15□□□□□ -0.3
SORL1-213ENST00000534754 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
SORL1-213ENST00000534754 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
SORL1-213ENST00000534754 MIER1Q8N108 512 aa13.14□□□□□ -0.31
SORL1-213ENST00000534754 NUP153P49790 1475 aaKnown RBP13.14□□□□□ -0.31
SORL1-213ENST00000534754 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
SORL1-213ENST00000534754 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
SORL1-213ENST00000534754 KDM5BQ9UGL1 1544 aa13.1□□□□□ -0.31
SORL1-213ENST00000534754 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
SORL1-213ENST00000534754 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
SORL1-213ENST00000534754 CDK13Q14004 1512 aaKnown RBP13.09□□□□□ -0.31
SORL1-213ENST00000534754 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
SORL1-213ENST00000534754 ATP10BO94823 1461 aa13.07□□□□□ -0.32
SORL1-213ENST00000534754 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
SORL1-213ENST00000534754 EPRSP07814 1512 aaKnown RBP13.06□□□□□ -0.32
SORL1-213ENST00000534754 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
SORL1-213ENST00000534754 MAPKBP1O60336 1514 aa13.05□□□□□ -0.32
SORL1-213ENST00000534754 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
SORL1-213ENST00000534754 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
SORL1-213ENST00000534754 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
SORL1-213ENST00000534754 TIAM1Q13009 1591 aa13.02□□□□□ -0.33
SORL1-213ENST00000534754 ATP1B4Q9UN42 357 aaPredicted RBP13.01□□□□□ -0.33
SORL1-213ENST00000534754 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
SORL1-213ENST00000534754 ASXL2Q76L83 1435 aa13□□□□□ -0.33
SORL1-213ENST00000534754 KIF14Q15058 1648 aa12.98□□□□□ -0.33
SORL1-213ENST00000534754 DIP2BQ9P265 1576 aa12.98□□□□□ -0.33
SORL1-213ENST00000534754 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
SORL1-213ENST00000534754 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.34
SORL1-213ENST00000534754 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
SORL1-213ENST00000534754 TSPOAP1O95153 1857 aa12.94□□□□□ -0.34
SORL1-213ENST00000534754 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
SORL1-213ENST00000534754 APLP2Q06481 763 aa12.93□□□□□ -0.34
SORL1-213ENST00000534754 ABCA9Q8IUA7 1624 aa12.93□□□□□ -0.34
SORL1-213ENST00000534754 MAP3K4Q9Y6R4 1608 aa12.93□□□□□ -0.34
SORL1-213ENST00000534754 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
SORL1-213ENST00000534754 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
SORL1-213ENST00000534754 TROQ12816 1431 aaPredicted RBP12.92□□□□□ -0.34
SORL1-213ENST00000534754 PPRC1Q5VV67 1664 aaKnown RBP12.92□□□□□ -0.34
SORL1-213ENST00000534754 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
SORL1-213ENST00000534754 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
SORL1-213ENST00000534754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.91□□□□□ -0.34
SORL1-213ENST00000534754 GLI2P10070 1586 aa12.91□□□□□ -0.34
SORL1-213ENST00000534754 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
SORL1-213ENST00000534754 MYO5CQ9NQX4 1742 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms