RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 PRG4Q92954 1404 aaPredicted RBP37.15■■■■□ 3.54
GSDMD-216ENST00000534602 RUSC2Q8N2Y8 1516 aa37.15■■■■□ 3.54
GSDMD-216ENST00000534602 KIAA0586Q9BVV6 1533 aa37.05■■■■□ 3.52
GSDMD-216ENST00000534602 CARMIL1Q5VZK9 1371 aa37.03■■■■□ 3.52
GSDMD-216ENST00000534602 RAPGEF2Q9Y4G8 1499 aa36.73■■■■□ 3.47
GSDMD-216ENST00000534602 IQGAP2Q13576 1575 aa36.7■■■■□ 3.47
GSDMD-216ENST00000534602 NPM1P06748 294 aaKnown RBP eCLIP36.69■■■■□ 3.46
GSDMD-216ENST00000534602 CARMIL2Q6F5E8 1435 aa36.68■■■■□ 3.46
GSDMD-216ENST00000534602 ADCY10Q96PN6 1610 aa36.66■■■■□ 3.46
GSDMD-216ENST00000534602 PTPRGP23470 1445 aa36.63■■■■□ 3.45
GSDMD-216ENST00000534602 MAPKBP1O60336 1514 aa36.61■■■■□ 3.45
GSDMD-216ENST00000534602 TNIKQ9UKE5 1360 aa36.6■■■■□ 3.45
GSDMD-216ENST00000534602 KIF13AQ9H1H9 1805 aa36.57■■■■□ 3.44
GSDMD-216ENST00000534602 ABCC10Q5T3U5 1492 aa36.52■■■■□ 3.44
GSDMD-216ENST00000534602 DISP1Q96F81 1524 aa36.51■■■■□ 3.44
GSDMD-216ENST00000534602 UGGT2Q9NYU1 1516 aa36.51■■■■□ 3.44
GSDMD-216ENST00000534602 PRXQ9BXM0 1461 aa36.45■■■■□ 3.43
GSDMD-216ENST00000534602 FAM69CQ0P6D2 419 aa36.45■■■■□ 3.43
GSDMD-216ENST00000534602 TTBK1Q5TCY1 1321 aaPredicted RBP36.42■■■■□ 3.42
GSDMD-216ENST00000534602 DIP2BQ9P265 1576 aa36.4■■■■□ 3.42
GSDMD-216ENST00000534602 ABCC2Q92887 1545 aa36.4■■■■□ 3.42
GSDMD-216ENST00000534602 UHRF1BP1LA0JNW5 1464 aa36.4■■■■□ 3.42
GSDMD-216ENST00000534602 UACAQ9BZF9 1416 aa36.37■■■■□ 3.41
GSDMD-216ENST00000534602 CTTNBP2Q8WZ74 1663 aa36.36■■■■□ 3.41
GSDMD-216ENST00000534602 KIAA0556O60303 1618 aa36.35■■■■□ 3.41
GSDMD-216ENST00000534602 GOLGA3Q08378 1498 aa36.27■■■■□ 3.4
GSDMD-216ENST00000534602 CSRNP3Q8WYN3 585 aa36.24■■■■□ 3.39
GSDMD-216ENST00000534602 PLB1Q6P1J6 1458 aa36.24■■■■□ 3.39
GSDMD-216ENST00000534602 ASXL2Q76L83 1435 aa36.22■■■■□ 3.39
GSDMD-216ENST00000534602 KDM5BQ9UGL1 1544 aa36.22■■■■□ 3.39
GSDMD-216ENST00000534602 EEA1Q15075 1411 aa36.19■■■■□ 3.38
GSDMD-216ENST00000534602 GLI2P10070 1586 aa36.12■■■■□ 3.37
GSDMD-216ENST00000534602 ZCCHC11Q5TAX3 1644 aaKnown RBP36.08■■■■□ 3.37
GSDMD-216ENST00000534602 TSPOAP1O95153 1857 aa36.06■■■■□ 3.36
GSDMD-216ENST00000534602 ABCA8O94911 1581 aa36.02■■■■□ 3.36
GSDMD-216ENST00000534602 EPRSP07814 1512 aaKnown RBP36.01■■■■□ 3.36
GSDMD-216ENST00000534602 KDM6BO15054 1643 aa36■■■■□ 3.35
GSDMD-216ENST00000534602 FAM9AQ8IZU1 332 aaPredicted RBP35.97■■■■□ 3.35
GSDMD-216ENST00000534602 AEBP2Q6ZN18 517 aaPredicted RBP35.96■■■■□ 3.35
GSDMD-216ENST00000534602 WDR7Q9Y4E6 1490 aa35.93■■■■□ 3.34
GSDMD-216ENST00000534602 PPRC1Q5VV67 1664 aaKnown RBP35.91■■■■□ 3.34
GSDMD-216ENST00000534602 SAMD9Q5K651 1589 aa35.9■■■■□ 3.34
GSDMD-216ENST00000534602 MAP3K4Q9Y6R4 1608 aa35.89■■■■□ 3.34
GSDMD-216ENST00000534602 P3H3Q8IVL6 736 aa35.86■■■■□ 3.33
GSDMD-216ENST00000534602 KIF21BO75037 1637 aa35.83■■■■□ 3.33
GSDMD-216ENST00000534602 CHIC1Q5VXU3 224 aa35.82■■■■□ 3.32
GSDMD-216ENST00000534602 TEX14Q8IWB6 1497 aa35.81■■■■□ 3.32
GSDMD-216ENST00000534602 ATP10BO94823 1461 aa35.73■■■■□ 3.31
GSDMD-216ENST00000534602 KCNH8Q96L42 1107 aa35.71■■■■□ 3.31
GSDMD-216ENST00000534602 CFAP43Q8NDM7 1665 aa35.69■■■■□ 3.3
GSDMD-216ENST00000534602 CD109Q6YHK3 1445 aa35.68■■■■□ 3.3
GSDMD-216ENST00000534602 RAPGEF6Q8TEU7 1601 aa35.68■■■■□ 3.3
GSDMD-216ENST00000534602 MAGI3Q5TCQ9 1506 aa35.67■■■■□ 3.3
GSDMD-216ENST00000534602 COL17A1Q9UMD9 1497 aaPredicted RBP35.67■■■■□ 3.3
GSDMD-216ENST00000534602 EFCAB5A4FU69 1503 aa35.64■■■■□ 3.3
GSDMD-216ENST00000534602 RANGAP1P46060 587 aaPredicted RBP35.64■■■■□ 3.3
GSDMD-216ENST00000534602 ARID3CA6NKF2 412 aa35.62■■■■□ 3.29
GSDMD-216ENST00000534602 FHOD3Q2V2M9 1422 aa35.62■■■■□ 3.29
GSDMD-216ENST00000534602 NUP153P49790 1475 aaKnown RBP35.56■■■■□ 3.28
GSDMD-216ENST00000534602 UBTFP17480 764 aaKnown RBP35.52■■■■□ 3.28
GSDMD-216ENST00000534602 KDM4FA0A1W2PPD8 638 aa35.5■■■■□ 3.27
GSDMD-216ENST00000534602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.49■■■■□ 3.27
GSDMD-216ENST00000534602 HNRNPUL2Q1KMD3 747 aaKnown RBP35.49■■■■□ 3.27
GSDMD-216ENST00000534602 ABCA9Q8IUA7 1624 aa35.49■■■■□ 3.27
GSDMD-216ENST00000534602 PHLDB1Q86UU1 1377 aa35.41■■■■□ 3.26
GSDMD-216ENST00000534602 ARAP3Q8WWN8 1544 aa35.39■■■■□ 3.26
GSDMD-216ENST00000534602 PLEKHD1A6NEE1 506 aa35.39■■■■□ 3.26
GSDMD-216ENST00000534602 EHMT2Q96KQ7 1210 aa35.39■■■■□ 3.26
GSDMD-216ENST00000534602 ARHGAP35Q9NRY4 1499 aa35.33■■■■□ 3.25
GSDMD-216ENST00000534602 FMN1Q68DA7 1419 aa35.32■■■■□ 3.25
GSDMD-216ENST00000534602 NEO1Q92859 1461 aa35.3■■■■□ 3.24
GSDMD-216ENST00000534602 ADGRL1O94910 1474 aa35.29■■■■□ 3.24
GSDMD-216ENST00000534602 CDK13Q14004 1512 aaKnown RBP35.2■■■■□ 3.23
GSDMD-216ENST00000534602 HECW1Q76N89 1606 aa35.19■■■■□ 3.22
GSDMD-216ENST00000534602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.17■■■■□ 3.22
GSDMD-216ENST00000534602 RAPGEF3O95398 923 aa35.12■■■■□ 3.21
GSDMD-216ENST00000534602 ATP1B4Q9UN42 357 aaPredicted RBP35.12■■■■□ 3.21
GSDMD-216ENST00000534602 CDK11AQ9UQ88 783 aaPredicted RBP35.11■■■■□ 3.21
GSDMD-216ENST00000534602 TTC37Q6PGP7 1564 aa35.09■■■■□ 3.21
GSDMD-216ENST00000534602 FANCAO15360 1455 aa35.08■■■■□ 3.21
GSDMD-216ENST00000534602 CFAP74Q9C0B2 1584 aa35.08■■■■□ 3.21
GSDMD-216ENST00000534602 AKNAQ7Z591 1439 aa35.06■■■■□ 3.2
GSDMD-216ENST00000534602 FRMPD1Q5SYB0 1578 aa35.04■■■■□ 3.2
GSDMD-216ENST00000534602 DENND4BO75064 1496 aaPredicted RBP35.02■■■■□ 3.2
GSDMD-216ENST00000534602 PLCH2O75038 1416 aa35■■■■□ 3.19
GSDMD-216ENST00000534602 TROQ12816 1431 aaPredicted RBP34.97■■■■□ 3.19
GSDMD-216ENST00000534602 CASKIN1Q8WXD9 1431 aa34.97■■■■□ 3.19
GSDMD-216ENST00000534602 RICTORQ6R327 1708 aa34.95■■■■□ 3.18
GSDMD-216ENST00000534602 CLIP1P30622 1438 aa34.92■■■■□ 3.18
GSDMD-216ENST00000534602 LRRIQ1Q96JM4 1722 aa34.92■■■■□ 3.18
GSDMD-216ENST00000534602 KIF14Q15058 1648 aa34.91■■■■□ 3.18
GSDMD-216ENST00000534602 CCDC18Q5T9S5 1454 aa34.9■■■■□ 3.18
GSDMD-216ENST00000534602 PCF11O94913 1555 aaKnown RBP34.89■■■■□ 3.18
GSDMD-216ENST00000534602 EFCAB2Q5VUJ9 269 aa34.88■■■■□ 3.17
GSDMD-216ENST00000534602 MYO5CQ9NQX4 1742 aa34.88■■■■□ 3.17
GSDMD-216ENST00000534602 ZMYM4Q5VZL5 1548 aa34.86■■■■□ 3.17
GSDMD-216ENST00000534602 ARHGEF40Q8TER5 1519 aa34.86■■■■□ 3.17
GSDMD-216ENST00000534602 FYCO1Q9BQS8 1478 aa34.84■■■■□ 3.17
GSDMD-216ENST00000534602 MAGI2Q86UL8 1455 aa34.84■■■■□ 3.17
GSDMD-216ENST00000534602 SCAPERQ9BY12 1400 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms